data_4FIV # _model_server_result.job_id IXxGFgsrvPTmzpSWOq5nKQ _model_server_result.datetime_utc '2024-10-19 13:19:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fiv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4FIV # _exptl.entry_id 4FIV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 794.978 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[2-(2-ACETYLAMINO-3-NAPHTALEN-1-YL-PROPIONYLAMINO)-4-METHYL-PENTANOYLAMINO]-3-HYDROXY-6-METHYL-HEPTANOIC ACID [1-(1-CARBAMOYL-2-NAPHTHALEN-1-YL-ETHYLCARBAMOYL)-PROPYL]-AMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FIV _cell.length_a 50.65 _cell.length_b 50.65 _cell.length_c 74.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FIV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 49.666667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C45 H58 N6 O7' _chem_comp.formula_weight 794.978 _chem_comp.id LP1 _chem_comp.mon_nstd_flag . _chem_comp.name '4-[2-(2-ACETYLAMINO-3-NAPHTALEN-1-YL-PROPIONYLAMINO)-4-METHYL-PENTANOYLAMINO]-3-HYDROXY-6-METHYL-HEPTANOIC ACID [1-(1-CARBAMOYL-2-NAPHTHALEN-1-YL-ETHYLCARBAMOYL)-PROPYL]-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LP1 sing 194 n n C1 H11 LP1 sing 195 n n C1 H12 LP1 sing 196 n n C1 H13A LP1 sing 197 n n C2 O3 LP1 doub 198 n n C2 N4 LP1 sing 199 n n C7 C8 LP1 doub 200 n y C7 C11 LP1 sing 201 n y C7 C6 LP1 sing 202 n n C8 C9 LP1 sing 203 n y C8 H8 LP1 sing 204 n n C9 C10 LP1 doub 205 n y C9 H9 LP1 sing 206 n n C10 C12 LP1 sing 207 n y C10 H10 LP1 sing 208 n n C11 C12 LP1 doub 209 n y C11 C13 LP1 sing 210 n y C12 C14 LP1 sing 211 n y C13 C15 LP1 doub 212 n y C13 H13 LP1 sing 213 n n C14 C16 LP1 doub 214 n y C14 H14 LP1 sing 215 n n C15 C16 LP1 sing 216 n y C15 H15 LP1 sing 217 n n C16 H16 LP1 sing 218 n n C20 C21 LP1 sing 219 n n C20 N19 LP1 sing 220 n n C20 C23 LP1 sing 221 n n C20 H20 LP1 sing 222 n n C21 N26 LP1 sing 223 n n C21 O22 LP1 doub 224 n n C24 C23 LP1 sing 225 n n C24 H241 LP1 sing 226 n n C24 H242 LP1 sing 227 n n C24 H243 LP1 sing 228 n n N26 C27 LP1 sing 229 n n N26 HNQ LP1 sing 230 n n C27 C32 LP1 sing 231 n n C27 C28 LP1 sing 232 n n C27 H27 LP1 sing 233 n n C30 C29 LP1 sing 234 n n C30 H301 LP1 sing 235 n n C30 H302 LP1 sing 236 n n C30 H303 LP1 sing 237 n n C31 C29 LP1 sing 238 n n C31 H311 LP1 sing 239 n n C31 H312 LP1 sing 240 n n C31 H313 LP1 sing 241 n n C32 C33 LP1 sing 242 n n C32 O34 LP1 sing 243 n n C32 H32 LP1 sing 244 n n C33 C35 LP1 sing 245 n n C33 H331 LP1 sing 246 n n C33 H332 LP1 sing 247 n n C35 O36 LP1 doub 248 n n C35 N37 LP1 sing 249 n n N4 C5 LP1 sing 250 n n N4 HN4 LP1 sing 251 n n C5 C6 LP1 sing 252 n n C5 C17 LP1 sing 253 n n C5 H5 LP1 sing 254 n n C6 H61 LP1 sing 255 n n C6 H62 LP1 sing 256 n n C17 O18 LP1 doub 257 n n C17 N19 LP1 sing 258 n n N19 HNJ LP1 sing 259 n n C23 C25 LP1 sing 260 n n C23 H23 LP1 sing 261 n n C25 H251 LP1 sing 262 n n C25 H252 LP1 sing 263 n n C25 H253 LP1 sing 264 n n C28 C29 LP1 sing 265 n n C28 H281 LP1 sing 266 n n C28 H282 LP1 sing 267 n n C29 H29 LP1 sing 268 n n O34 HOY LP1 sing 269 n n N37 C38 LP1 sing 270 n n N37 HN7 LP1 sing 271 n n C38 C39 LP1 sing 272 n n C38 C41 LP1 sing 273 n n C38 H38 LP1 sing 274 n n C39 C40 LP1 sing 275 n n C39 H391 LP1 sing 276 n n C39 H392 LP1 sing 277 n n C40 H401 LP1 sing 278 n n C40 H402 LP1 sing 279 n n C40 H403 LP1 sing 280 n n C41 O42 LP1 doub 281 n n C41 N43 LP1 sing 282 n n N43 C44 LP1 sing 283 n n N43 HN3 LP1 sing 284 n n C44 C45 LP1 sing 285 n n C44 C56 LP1 sing 286 n n C44 H44 LP1 sing 287 n n C45 C46 LP1 sing 288 n n C45 H451 LP1 sing 289 n n C45 H452 LP1 sing 290 n n C46 C47 LP1 doub 291 n y C46 C50 LP1 sing 292 n y C47 C48 LP1 sing 293 n y C47 H47 LP1 sing 294 n n C48 C49 LP1 doub 295 n y C48 H48 LP1 sing 296 n n C49 C51 LP1 sing 297 n y C49 H49 LP1 sing 298 n n C50 C51 LP1 doub 299 n y C50 C52 LP1 sing 300 n y C51 C53 LP1 sing 301 n y C52 C54 LP1 doub 302 n y C52 H52 LP1 sing 303 n n C53 C55 LP1 doub 304 n y C53 H53 LP1 sing 305 n n C54 C55 LP1 sing 306 n y C54 H54 LP1 sing 307 n n C55 H55 LP1 sing 308 n n C56 O57 LP1 doub 309 n n C56 N58 LP1 sing 310 n n N58 HN1 LP1 sing 311 n n N58 HN2 LP1 sing 312 n n # _atom_sites.entry_id 4FIV _atom_sites.fract_transf_matrix[1][1] 0.019743 _atom_sites.fract_transf_matrix[1][2] 0.011399 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LP1 A 1 201 201 LP1 1NI . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 308 HOH HOH . C 3 HOH A 9 309 309 HOH HOH . C 3 HOH A 10 310 310 HOH HOH . C 3 HOH A 11 311 311 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 313 313 HOH HOH . C 3 HOH A 14 314 314 HOH HOH . C 3 HOH A 15 315 315 HOH HOH . C 3 HOH A 16 316 316 HOH HOH . C 3 HOH A 17 317 317 HOH HOH . C 3 HOH A 18 318 318 HOH HOH . C 3 HOH A 19 319 319 HOH HOH . C 3 HOH A 20 320 320 HOH HOH . C 3 HOH A 21 321 321 HOH HOH . C 3 HOH A 22 322 322 HOH HOH . C 3 HOH A 23 323 323 HOH HOH . C 3 HOH A 24 324 324 HOH HOH . C 3 HOH A 25 325 325 HOH HOH . C 3 HOH A 26 326 326 HOH HOH . C 3 HOH A 27 327 327 HOH HOH . C 3 HOH A 28 328 328 HOH HOH . C 3 HOH A 29 329 329 HOH HOH . C 3 HOH A 30 330 330 HOH HOH . C 3 HOH A 31 331 331 HOH HOH . C 3 HOH A 32 332 332 HOH HOH . C 3 HOH A 33 333 333 HOH HOH . C 3 HOH A 34 334 334 HOH HOH . C 3 HOH A 35 335 335 HOH HOH . C 3 HOH A 36 336 336 HOH HOH . C 3 HOH A 37 337 337 HOH HOH . C 3 HOH A 38 338 338 HOH HOH . C 3 HOH A 39 339 339 HOH HOH . C 3 HOH A 40 340 340 HOH HOH . C 3 HOH A 41 341 341 HOH HOH . C 3 HOH A 42 342 342 HOH HOH . C 3 HOH A 43 343 343 HOH HOH . C 3 HOH A 44 344 344 HOH HOH . C 3 HOH A 45 345 345 HOH HOH . C 3 HOH A 46 346 346 HOH HOH . C 3 HOH A 47 347 347 HOH HOH . C 3 HOH A 48 348 348 HOH HOH . C 3 HOH A 49 349 349 HOH HOH . C 3 HOH A 50 350 350 HOH HOH . C 3 HOH A 51 351 351 HOH HOH . C 3 HOH A 52 352 352 HOH HOH . C 3 HOH A 53 353 353 HOH HOH . C 3 HOH A 54 354 354 HOH HOH . C 3 HOH A 55 355 355 HOH HOH . C 3 HOH A 56 356 356 HOH HOH . C 3 HOH A 57 357 357 HOH HOH . C 3 HOH A 58 358 358 HOH HOH . C 3 HOH A 59 359 359 HOH HOH . C 3 HOH A 60 360 360 HOH HOH . C 3 HOH A 61 361 361 HOH HOH . C 3 HOH A 62 362 362 HOH HOH . C 3 HOH A 63 363 363 HOH HOH . C 3 HOH A 64 364 364 HOH HOH . C 3 HOH A 65 365 365 HOH HOH . C 3 HOH A 66 366 366 HOH HOH . C 3 HOH A 67 367 367 HOH HOH . C 3 HOH A 68 368 368 HOH HOH . C 3 HOH A 69 369 369 HOH HOH . C 3 HOH A 70 370 370 HOH HOH . C 3 HOH A 71 371 371 HOH HOH . C 3 HOH A 72 372 372 HOH HOH . C 3 HOH A 73 373 373 HOH HOH . C 3 HOH A 74 374 374 HOH HOH . C 3 HOH A 75 375 375 HOH HOH . C 3 HOH A 76 376 376 HOH HOH . C 3 HOH A 77 377 377 HOH HOH . C 3 HOH A 78 378 378 HOH HOH . C 3 HOH A 79 379 379 HOH HOH . C 3 HOH A 80 380 380 HOH HOH . C 3 HOH A 81 381 381 HOH HOH . C 3 HOH A 82 382 382 HOH HOH . C 3 HOH A 83 383 383 HOH HOH . C 3 HOH A 84 384 384 HOH HOH . C 3 HOH A 85 385 385 HOH HOH . C 3 HOH A 86 386 386 HOH HOH . C 3 HOH A 87 387 387 HOH HOH . C 3 HOH A 88 388 388 HOH HOH . C 3 HOH A 89 389 389 HOH HOH . C 3 HOH A 90 390 390 HOH HOH . C 3 HOH A 91 391 391 HOH HOH . C 3 HOH A 92 392 392 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LP1 . A . B 2 23.728 6.428 33.266 0.5 16.51 ? C1 LP1 201 A 1 HETATM 2 C C2 LP1 . A . B 2 24.214 5.232 32.468 0.5 11.68 ? C2 LP1 201 A 1 HETATM 3 C C7 LP1 . A . B 2 23.614 1.428 33.401 0.5 13.32 ? C7 LP1 201 A 1 HETATM 4 C C8 LP1 . A . B 2 24.803 1.974 33.842 0.5 9.45 ? C8 LP1 201 A 1 HETATM 5 C C9 LP1 . A . B 2 25.463 1.475 34.958 0.5 11.68 ? C9 LP1 201 A 1 HETATM 6 C C10 LP1 . A . B 2 24.926 0.412 35.671 0.5 16.74 ? C10 LP1 201 A 1 HETATM 7 C C11 LP1 . A . B 2 23.083 0.34 34.093 0.5 14.08 ? C11 LP1 201 A 1 HETATM 8 C C12 LP1 . A . B 2 23.719 -0.163 35.248 0.5 13.78 ? C12 LP1 201 A 1 HETATM 9 C C13 LP1 . A . B 2 21.862 -0.203 33.685 0.5 17.59 ? C13 LP1 201 A 1 HETATM 10 C C14 LP1 . A . B 2 23.157 -1.247 35.925 0.5 13.93 ? C14 LP1 201 A 1 HETATM 11 C C15 LP1 . A . B 2 21.336 -1.285 34.347 0.5 19.98 ? C15 LP1 201 A 1 HETATM 12 C C16 LP1 . A . B 2 21.982 -1.777 35.444 0.5 21.3 ? C16 LP1 201 A 1 HETATM 13 C C20 LP1 . A . B 2 23.003 3.184 27.734 0.5 8.91 ? C20 LP1 201 A 1 HETATM 14 C C21 LP1 . A . B 2 23.273 1.908 26.947 0.5 12.07 ? C21 LP1 201 A 1 HETATM 15 C C24 LP1 . A . B 2 22.913 5.609 27.812 0.5 6.52 ? C24 LP1 201 A 1 HETATM 16 N N26 LP1 . A . B 2 22.181 1.219 26.732 0.5 8.8 ? N26 LP1 201 A 1 HETATM 17 C C27 LP1 . A . B 2 22.079 -0.087 26.18 0.5 11.65 ? C27 LP1 201 A 1 HETATM 18 C C30 LP1 . A . B 2 22.181 -1.557 29.916 0.5 6.22 ? C30 LP1 201 A 1 HETATM 19 C C31 LP1 . A . B 2 24.076 -1.439 28.477 0.5 8.67 ? C31 LP1 201 A 1 HETATM 20 C C32 LP1 . A . B 2 21.334 -0.235 24.834 0.5 12.17 ? C32 LP1 201 A 1 HETATM 21 C C33 LP1 . A . B 2 22.186 0.197 23.628 0.5 12.99 ? C33 LP1 201 A 1 HETATM 22 C C35 LP1 . A . B 2 23.065 -0.882 23.021 0.5 13.19 ? C35 LP1 201 A 1 HETATM 23 O O3 LP1 . A . B 2 25.353 5.075 32.072 0.5 19.04 ? O3 LP1 201 A 1 HETATM 24 N N4 LP1 . A . B 2 23.309 4.305 32.222 0.5 9.76 ? N4 LP1 201 A 1 HETATM 25 C C5 LP1 . A . B 2 23.542 3.085 31.476 0.5 13.21 ? C5 LP1 201 A 1 HETATM 26 C C6 LP1 . A . B 2 22.874 1.916 32.197 0.5 11.18 ? C6 LP1 201 A 1 HETATM 27 C C17 LP1 . A . B 2 22.906 3.31 30.118 0.5 10.66 ? C17 LP1 201 A 1 HETATM 28 O O18 LP1 . A . B 2 21.814 3.846 30.085 0.5 9.83 ? O18 LP1 201 A 1 HETATM 29 N N19 LP1 . A . B 2 23.589 2.967 29.048 0.5 16.62 ? N19 LP1 201 A 1 HETATM 30 O O22 LP1 . A . B 2 24.403 1.569 26.641 0.5 8.79 ? O22 LP1 201 A 1 HETATM 31 C C23 LP1 . A . B 2 23.522 4.456 27.049 0.5 8.85 ? C23 LP1 201 A 1 HETATM 32 C C25 LP1 . A . B 2 25.028 4.627 27.198 0.5 11.37 ? C25 LP1 201 A 1 HETATM 33 C C28 LP1 . A . B 2 21.837 -1 27.415 0.5 6.81 ? C28 LP1 201 A 1 HETATM 34 C C29 LP1 . A . B 2 22.701 -0.841 28.689 0.5 8.27 ? C29 LP1 201 A 1 HETATM 35 O O34 LP1 . A . B 2 20.125 0.457 24.591 0.5 13.29 ? O34 LP1 201 A 1 HETATM 36 O O36 LP1 . A . B 2 24.208 -1.077 23.437 0.5 16.7 ? O36 LP1 201 A 1 HETATM 37 N N37 LP1 . A . B 2 22.544 -1.604 22.03 0.5 11.12 ? N37 LP1 201 A 1 HETATM 38 C C38 LP1 . A . B 2 23.301 -2.624 21.365 0.5 14.06 ? C38 LP1 201 A 1 HETATM 39 C C39 LP1 . A . B 2 23.455 -3.922 22.151 0.5 8.45 ? C39 LP1 201 A 1 HETATM 40 C C40 LP1 . A . B 2 24.491 -4.849 21.555 0.5 5.46 ? C40 LP1 201 A 1 HETATM 41 C C41 LP1 . A . B 2 22.938 -2.874 19.915 0.5 13.54 ? C41 LP1 201 A 1 HETATM 42 O O42 LP1 . A . B 2 21.784 -3.181 19.612 0.5 6.78 ? O42 LP1 201 A 1 HETATM 43 N N43 LP1 . A . B 2 23.943 -2.739 19.044 0.5 17.01 ? N43 LP1 201 A 1 HETATM 44 C C44 LP1 . A . B 2 23.743 -2.961 17.614 0.5 17.26 ? C44 LP1 201 A 1 HETATM 45 C C45 LP1 . A . B 2 24.339 -1.812 16.748 0.5 17.71 ? C45 LP1 201 A 1 HETATM 46 C C46 LP1 . A . B 2 23.505 -0.524 16.815 0.5 20.73 ? C46 LP1 201 A 1 HETATM 47 C C47 LP1 . A . B 2 22.4 -0.352 15.993 0.5 19.82 ? C47 LP1 201 A 1 HETATM 48 C C48 LP1 . A . B 2 21.613 0.811 16.047 0.5 22.82 ? C48 LP1 201 A 1 HETATM 49 C C49 LP1 . A . B 2 21.917 1.825 16.946 0.5 20.2 ? C49 LP1 201 A 1 HETATM 50 C C50 LP1 . A . B 2 23.815 0.49 17.744 0.5 24.31 ? C50 LP1 201 A 1 HETATM 51 C C51 LP1 . A . B 2 22.998 1.669 17.831 0.5 23.01 ? C51 LP1 201 A 1 HETATM 52 C C52 LP1 . A . B 2 24.931 0.366 18.593 0.5 24.94 ? C52 LP1 201 A 1 HETATM 53 C C53 LP1 . A . B 2 23.328 2.654 18.757 0.5 24.58 ? C53 LP1 201 A 1 HETATM 54 C C54 LP1 . A . B 2 25.206 1.36 19.514 0.5 26.57 ? C54 LP1 201 A 1 HETATM 55 C C55 LP1 . A . B 2 24.434 2.501 19.583 0.5 24.06 ? C55 LP1 201 A 1 HETATM 56 C C56 LP1 . A . B 2 24.312 -4.346 17.324 0.5 15.88 ? C56 LP1 201 A 1 HETATM 57 O O57 LP1 . A . B 2 25.409 -4.613 17.84 0.5 18.18 ? O57 LP1 201 A 1 HETATM 58 N N58 LP1 . A . B 2 23.729 -5.262 16.583 0.5 13.84 ? N58 LP1 201 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 58 #