data_4FJ4 # _model_server_result.job_id 1mRI-LKYr6dbsFgv04Jibg _model_server_result.datetime_utc '2024-10-19 04:49:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fj4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4FJ4 # _exptl.entry_id 4FJ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FJ4 _cell.length_a 44.812 _cell.length_b 85.107 _cell.length_c 113.485 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FJ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,C,D,G 2 1 B,E,F,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 156 A ASN 156 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc2 A SG CYS 167 A CYS 167 1_555 C HG EMC . A EMC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc3 B O ASN 156 B ASN 156 1_555 F NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc4 B O SER 166 B SER 166 1_555 E HG EMC . B EMC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc5 B SG CYS 167 B CYS 167 1_555 E HG EMC . B EMC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4FJ4 _atom_sites.fract_transf_matrix[1][1] 0.022315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EMC A 1 201 1 EMC EMC . D 3 NA A 1 202 1 NA NA . E 2 EMC B 1 201 2 EMC EMC . F 3 NA B 1 202 2 NA NA . G 4 HOH A 1 301 1 HOH HOH . G 4 HOH A 2 302 2 HOH HOH . G 4 HOH A 3 303 4 HOH HOH . G 4 HOH A 4 304 5 HOH HOH . G 4 HOH A 5 305 18 HOH HOH . G 4 HOH A 6 306 21 HOH HOH . G 4 HOH A 7 307 22 HOH HOH . G 4 HOH A 8 308 23 HOH HOH . G 4 HOH A 9 309 25 HOH HOH . G 4 HOH A 10 310 27 HOH HOH . G 4 HOH A 11 311 29 HOH HOH . G 4 HOH A 12 312 31 HOH HOH . G 4 HOH A 13 313 32 HOH HOH . G 4 HOH A 14 314 33 HOH HOH . G 4 HOH A 15 315 35 HOH HOH . G 4 HOH A 16 316 43 HOH HOH . G 4 HOH A 17 317 44 HOH HOH . G 4 HOH A 18 318 45 HOH HOH . G 4 HOH A 19 319 48 HOH HOH . G 4 HOH A 20 320 49 HOH HOH . G 4 HOH A 21 321 52 HOH HOH . G 4 HOH A 22 322 53 HOH HOH . G 4 HOH A 23 323 54 HOH HOH . G 4 HOH A 24 324 57 HOH HOH . G 4 HOH A 25 325 61 HOH HOH . G 4 HOH A 26 326 65 HOH HOH . G 4 HOH A 27 327 66 HOH HOH . G 4 HOH A 28 328 67 HOH HOH . G 4 HOH A 29 329 68 HOH HOH . G 4 HOH A 30 330 69 HOH HOH . G 4 HOH A 31 331 70 HOH HOH . G 4 HOH A 32 332 71 HOH HOH . G 4 HOH A 33 333 73 HOH HOH . G 4 HOH A 34 334 74 HOH HOH . G 4 HOH A 35 335 75 HOH HOH . G 4 HOH A 36 336 80 HOH HOH . G 4 HOH A 37 337 86 HOH HOH . G 4 HOH A 38 338 87 HOH HOH . G 4 HOH A 39 339 89 HOH HOH . G 4 HOH A 40 340 92 HOH HOH . G 4 HOH A 41 341 93 HOH HOH . G 4 HOH A 42 342 94 HOH HOH . G 4 HOH A 43 343 97 HOH HOH . G 4 HOH A 44 344 98 HOH HOH . G 4 HOH A 45 345 99 HOH HOH . G 4 HOH A 46 346 100 HOH HOH . G 4 HOH A 47 347 107 HOH HOH . G 4 HOH A 48 348 108 HOH HOH . G 4 HOH A 49 349 109 HOH HOH . G 4 HOH A 50 350 111 HOH HOH . G 4 HOH A 51 351 114 HOH HOH . G 4 HOH A 52 352 120 HOH HOH . G 4 HOH A 53 353 122 HOH HOH . G 4 HOH A 54 354 126 HOH HOH . G 4 HOH A 55 355 127 HOH HOH . G 4 HOH A 56 356 128 HOH HOH . G 4 HOH A 57 357 129 HOH HOH . G 4 HOH A 58 358 130 HOH HOH . G 4 HOH A 59 359 131 HOH HOH . G 4 HOH A 60 360 133 HOH HOH . G 4 HOH A 61 361 136 HOH HOH . G 4 HOH A 62 362 137 HOH HOH . G 4 HOH A 63 363 139 HOH HOH . G 4 HOH A 64 364 144 HOH HOH . G 4 HOH A 65 365 145 HOH HOH . G 4 HOH A 66 366 150 HOH HOH . G 4 HOH A 67 367 151 HOH HOH . G 4 HOH A 68 368 153 HOH HOH . G 4 HOH A 69 369 157 HOH HOH . G 4 HOH A 70 370 158 HOH HOH . G 4 HOH A 71 371 162 HOH HOH . G 4 HOH A 72 372 163 HOH HOH . G 4 HOH A 73 373 165 HOH HOH . G 4 HOH A 74 374 166 HOH HOH . G 4 HOH A 75 375 169 HOH HOH . G 4 HOH A 76 376 173 HOH HOH . G 4 HOH A 77 377 177 HOH HOH . G 4 HOH A 78 378 178 HOH HOH . G 4 HOH A 79 379 179 HOH HOH . G 4 HOH A 80 380 180 HOH HOH . G 4 HOH A 81 381 181 HOH HOH . G 4 HOH A 82 382 182 HOH HOH . G 4 HOH A 83 383 183 HOH HOH . G 4 HOH A 84 384 186 HOH HOH . G 4 HOH A 85 385 188 HOH HOH . G 4 HOH A 86 386 189 HOH HOH . G 4 HOH A 87 387 190 HOH HOH . G 4 HOH A 88 388 192 HOH HOH . G 4 HOH A 89 389 194 HOH HOH . G 4 HOH A 90 390 198 HOH HOH . G 4 HOH A 91 391 199 HOH HOH . G 4 HOH A 92 392 200 HOH HOH . G 4 HOH A 93 393 202 HOH HOH . G 4 HOH A 94 394 204 HOH HOH . G 4 HOH A 95 395 207 HOH HOH . G 4 HOH A 96 396 209 HOH HOH . G 4 HOH A 97 397 210 HOH HOH . G 4 HOH A 98 398 212 HOH HOH . G 4 HOH A 99 399 213 HOH HOH . G 4 HOH A 100 400 215 HOH HOH . G 4 HOH A 101 401 216 HOH HOH . G 4 HOH A 102 402 217 HOH HOH . G 4 HOH A 103 403 218 HOH HOH . G 4 HOH A 104 404 221 HOH HOH . G 4 HOH A 105 405 225 HOH HOH . G 4 HOH A 106 406 227 HOH HOH . G 4 HOH A 107 407 230 HOH HOH . G 4 HOH A 108 408 238 HOH HOH . G 4 HOH A 109 409 239 HOH HOH . G 4 HOH A 110 410 240 HOH HOH . G 4 HOH A 111 411 243 HOH HOH . G 4 HOH A 112 412 246 HOH HOH . G 4 HOH A 113 413 248 HOH HOH . G 4 HOH A 114 414 249 HOH HOH . G 4 HOH A 115 415 252 HOH HOH . G 4 HOH A 116 416 253 HOH HOH . G 4 HOH A 117 417 255 HOH HOH . G 4 HOH A 118 418 256 HOH HOH . G 4 HOH A 119 419 257 HOH HOH . G 4 HOH A 120 420 260 HOH HOH . G 4 HOH A 121 421 265 HOH HOH . G 4 HOH A 122 422 272 HOH HOH . G 4 HOH A 123 423 275 HOH HOH . G 4 HOH A 124 424 280 HOH HOH . G 4 HOH A 125 425 289 HOH HOH . G 4 HOH A 126 426 293 HOH HOH . G 4 HOH A 127 427 294 HOH HOH . G 4 HOH A 128 428 295 HOH HOH . H 4 HOH B 1 301 3 HOH HOH . H 4 HOH B 2 302 6 HOH HOH . H 4 HOH B 3 303 7 HOH HOH . H 4 HOH B 4 304 8 HOH HOH . H 4 HOH B 5 305 9 HOH HOH . H 4 HOH B 6 306 10 HOH HOH . H 4 HOH B 7 307 11 HOH HOH . H 4 HOH B 8 308 12 HOH HOH . H 4 HOH B 9 309 13 HOH HOH . H 4 HOH B 10 310 14 HOH HOH . H 4 HOH B 11 311 15 HOH HOH . H 4 HOH B 12 312 16 HOH HOH . H 4 HOH B 13 313 17 HOH HOH . H 4 HOH B 14 314 19 HOH HOH . H 4 HOH B 15 315 20 HOH HOH . H 4 HOH B 16 316 24 HOH HOH . H 4 HOH B 17 317 26 HOH HOH . H 4 HOH B 18 318 28 HOH HOH . H 4 HOH B 19 319 30 HOH HOH . H 4 HOH B 20 320 34 HOH HOH . H 4 HOH B 21 321 36 HOH HOH . H 4 HOH B 22 322 37 HOH HOH . H 4 HOH B 23 323 38 HOH HOH . H 4 HOH B 24 324 39 HOH HOH . H 4 HOH B 25 325 40 HOH HOH . H 4 HOH B 26 326 41 HOH HOH . H 4 HOH B 27 327 42 HOH HOH . H 4 HOH B 28 328 46 HOH HOH . H 4 HOH B 29 329 47 HOH HOH . H 4 HOH B 30 330 50 HOH HOH . H 4 HOH B 31 331 51 HOH HOH . H 4 HOH B 32 332 55 HOH HOH . H 4 HOH B 33 333 56 HOH HOH . H 4 HOH B 34 334 58 HOH HOH . H 4 HOH B 35 335 59 HOH HOH . H 4 HOH B 36 336 60 HOH HOH . H 4 HOH B 37 337 62 HOH HOH . H 4 HOH B 38 338 63 HOH HOH . H 4 HOH B 39 339 64 HOH HOH . H 4 HOH B 40 340 72 HOH HOH . H 4 HOH B 41 341 76 HOH HOH . H 4 HOH B 42 342 77 HOH HOH . H 4 HOH B 43 343 78 HOH HOH . H 4 HOH B 44 344 81 HOH HOH . H 4 HOH B 45 345 83 HOH HOH . H 4 HOH B 46 346 84 HOH HOH . H 4 HOH B 47 347 85 HOH HOH . H 4 HOH B 48 348 88 HOH HOH . H 4 HOH B 49 349 90 HOH HOH . H 4 HOH B 50 350 91 HOH HOH . H 4 HOH B 51 351 95 HOH HOH . H 4 HOH B 52 352 96 HOH HOH . H 4 HOH B 53 353 101 HOH HOH . H 4 HOH B 54 354 103 HOH HOH . H 4 HOH B 55 355 104 HOH HOH . H 4 HOH B 56 356 105 HOH HOH . H 4 HOH B 57 357 106 HOH HOH . H 4 HOH B 58 358 110 HOH HOH . H 4 HOH B 59 359 112 HOH HOH . H 4 HOH B 60 360 113 HOH HOH . H 4 HOH B 61 361 115 HOH HOH . H 4 HOH B 62 362 116 HOH HOH . H 4 HOH B 63 363 117 HOH HOH . H 4 HOH B 64 364 118 HOH HOH . H 4 HOH B 65 365 119 HOH HOH . H 4 HOH B 66 366 121 HOH HOH . H 4 HOH B 67 367 123 HOH HOH . H 4 HOH B 68 368 125 HOH HOH . H 4 HOH B 69 369 132 HOH HOH . H 4 HOH B 70 370 134 HOH HOH . H 4 HOH B 71 371 135 HOH HOH . H 4 HOH B 72 372 138 HOH HOH . H 4 HOH B 73 373 140 HOH HOH . H 4 HOH B 74 374 141 HOH HOH . H 4 HOH B 75 375 143 HOH HOH . H 4 HOH B 76 376 146 HOH HOH . H 4 HOH B 77 377 148 HOH HOH . H 4 HOH B 78 378 149 HOH HOH . H 4 HOH B 79 379 152 HOH HOH . H 4 HOH B 80 380 154 HOH HOH . H 4 HOH B 81 381 155 HOH HOH . H 4 HOH B 82 382 156 HOH HOH . H 4 HOH B 83 383 159 HOH HOH . H 4 HOH B 84 384 160 HOH HOH . H 4 HOH B 85 385 161 HOH HOH . H 4 HOH B 86 386 167 HOH HOH . H 4 HOH B 87 387 168 HOH HOH . H 4 HOH B 88 388 170 HOH HOH . H 4 HOH B 89 389 171 HOH HOH . H 4 HOH B 90 390 172 HOH HOH . H 4 HOH B 91 391 174 HOH HOH . H 4 HOH B 92 392 175 HOH HOH . H 4 HOH B 93 393 176 HOH HOH . H 4 HOH B 94 394 184 HOH HOH . H 4 HOH B 95 395 185 HOH HOH . H 4 HOH B 96 396 187 HOH HOH . H 4 HOH B 97 397 191 HOH HOH . H 4 HOH B 98 398 193 HOH HOH . H 4 HOH B 99 399 196 HOH HOH . H 4 HOH B 100 400 201 HOH HOH . H 4 HOH B 101 401 203 HOH HOH . H 4 HOH B 102 402 208 HOH HOH . H 4 HOH B 103 403 211 HOH HOH . H 4 HOH B 104 404 214 HOH HOH . H 4 HOH B 105 405 219 HOH HOH . H 4 HOH B 106 406 220 HOH HOH . H 4 HOH B 107 407 224 HOH HOH . H 4 HOH B 108 408 229 HOH HOH . H 4 HOH B 109 409 232 HOH HOH . H 4 HOH B 110 410 233 HOH HOH . H 4 HOH B 111 411 235 HOH HOH . H 4 HOH B 112 412 237 HOH HOH . H 4 HOH B 113 413 241 HOH HOH . H 4 HOH B 114 414 244 HOH HOH . H 4 HOH B 115 415 245 HOH HOH . H 4 HOH B 116 416 250 HOH HOH . H 4 HOH B 117 417 254 HOH HOH . H 4 HOH B 118 418 264 HOH HOH . H 4 HOH B 119 419 268 HOH HOH . H 4 HOH B 120 420 269 HOH HOH . H 4 HOH B 121 421 270 HOH HOH . H 4 HOH B 122 422 281 HOH HOH . H 4 HOH B 123 423 283 HOH HOH . H 4 HOH B 124 424 284 HOH HOH . H 4 HOH B 125 425 290 HOH HOH . H 4 HOH B 126 426 291 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.377 _atom_site.Cartn_y 13.732 _atom_site.Cartn_z 8.134 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #