data_4FMW # _model_server_result.job_id TCA5r5rxX9IgJxmtq1OcuQ _model_server_result.datetime_utc '2024-11-04 22:34:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":303}' # _entry.id 4FMW # _exptl.entry_id 4FMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.43 _cell.angle_beta 90.03 _cell.angle_gamma 92.88 _cell.entry_id 4FMW _cell.length_a 37.097 _cell.length_b 43.309 _cell.length_c 60.347 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,CA 1 1 B,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,DA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 P N N ? 3 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 32 A LEU 112 1_555 A N MSE 33 A MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale2 A C MSE 33 A MSE 113 1_555 A N VAL 34 A VAL 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale3 A C ASN 73 A ASN 153 1_555 A N MSE 74 A MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale4 A C MSE 74 A MSE 154 1_555 A N ASP 75 A ASP 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale5 B C LEU 32 B LEU 112 1_555 B N MSE 33 B MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale6 B C MSE 33 B MSE 113 1_555 B N VAL 34 B VAL 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale7 B C ASN 73 B ASN 153 1_555 B N MSE 74 B MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale8 B C MSE 74 B MSE 154 1_555 B N ASP 75 B ASP 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? metalc ? metalc1 B O THR 20 B THR 100 1_555 R K K . B K 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc2 B O GLU 119 B GLU 199 1_555 R K K . B K 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc3 B O SER 120 B SER 200 1_555 R K K . B K 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? metalc ? metalc4 B O LYS 121 B LYS 201 1_555 R K K . B K 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc5 R K K . B K 304 1_555 DA O HOH . B HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.317 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4FMW _atom_sites.fract_transf_matrix[1][1] 0.026956 _atom_sites.fract_transf_matrix[1][2] 0.001356 _atom_sites.fract_transf_matrix[1][3] 0.000264 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023119 _atom_sites.fract_transf_matrix[2][3] 0.004262 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 301 1000 SAH SAH . D 3 EDO A 1 302 2001 EDO EDO . E 4 UNX A 1 303 1001 UNX UNX . F 4 UNX A 1 304 1002 UNX UNX . G 4 UNX A 1 305 1003 UNX UNX . H 4 UNX A 1 306 1006 UNX UNX . I 4 UNX A 1 307 1010 UNX UNX . J 4 UNX A 1 308 1011 UNX UNX . K 4 UNX A 1 309 1012 UNX UNX . L 4 UNX A 1 310 1017 UNX UNX . M 4 UNX A 1 311 1018 UNX UNX . N 4 UNX A 1 312 1019 UNX UNX . O 2 SAH B 1 301 1000 SAH SAH . P 3 EDO B 1 302 2000 EDO EDO . Q 3 EDO B 1 303 2002 EDO EDO . R 5 K B 1 304 1 K K . S 4 UNX B 1 305 1004 UNX UNX . T 4 UNX B 1 306 1005 UNX UNX . U 4 UNX B 1 307 1007 UNX UNX . V 4 UNX B 1 308 1009 UNX UNX . W 4 UNX B 1 309 1013 UNX UNX . X 4 UNX B 1 310 1014 UNX UNX . Y 4 UNX B 1 311 1015 UNX UNX . Z 4 UNX B 1 312 1016 UNX UNX . AA 4 UNX B 1 313 1020 UNX UNX . BA 4 UNX B 1 314 1023 UNX UNX . CA 6 HOH A 1 401 1 HOH HOH . CA 6 HOH A 2 402 3 HOH HOH . CA 6 HOH A 3 403 5 HOH HOH . CA 6 HOH A 4 404 7 HOH HOH . CA 6 HOH A 5 405 8 HOH HOH . CA 6 HOH A 6 406 10 HOH HOH . CA 6 HOH A 7 407 11 HOH HOH . CA 6 HOH A 8 408 12 HOH HOH . CA 6 HOH A 9 409 13 HOH HOH . CA 6 HOH A 10 410 14 HOH HOH . CA 6 HOH A 11 411 18 HOH HOH . CA 6 HOH A 12 412 21 HOH HOH . CA 6 HOH A 13 413 22 HOH HOH . CA 6 HOH A 14 414 23 HOH HOH . CA 6 HOH A 15 415 24 HOH HOH . CA 6 HOH A 16 416 25 HOH HOH . CA 6 HOH A 17 417 27 HOH HOH . CA 6 HOH A 18 418 30 HOH HOH . CA 6 HOH A 19 419 31 HOH HOH . CA 6 HOH A 20 420 33 HOH HOH . CA 6 HOH A 21 421 35 HOH HOH . CA 6 HOH A 22 422 39 HOH HOH . CA 6 HOH A 23 423 40 HOH HOH . CA 6 HOH A 24 424 42 HOH HOH . CA 6 HOH A 25 425 44 HOH HOH . CA 6 HOH A 26 426 47 HOH HOH . CA 6 HOH A 27 427 48 HOH HOH . CA 6 HOH A 28 428 49 HOH HOH . CA 6 HOH A 29 429 50 HOH HOH . CA 6 HOH A 30 430 51 HOH HOH . CA 6 HOH A 31 431 52 HOH HOH . CA 6 HOH A 32 432 54 HOH HOH . CA 6 HOH A 33 433 57 HOH HOH . CA 6 HOH A 34 434 58 HOH HOH . CA 6 HOH A 35 435 60 HOH HOH . CA 6 HOH A 36 436 62 HOH HOH . CA 6 HOH A 37 437 64 HOH HOH . CA 6 HOH A 38 438 65 HOH HOH . CA 6 HOH A 39 439 72 HOH HOH . CA 6 HOH A 40 440 73 HOH HOH . CA 6 HOH A 41 441 74 HOH HOH . CA 6 HOH A 42 442 77 HOH HOH . CA 6 HOH A 43 443 78 HOH HOH . CA 6 HOH A 44 444 80 HOH HOH . CA 6 HOH A 45 445 81 HOH HOH . CA 6 HOH A 46 446 91 HOH HOH . CA 6 HOH A 47 447 92 HOH HOH . CA 6 HOH A 48 448 93 HOH HOH . CA 6 HOH A 49 449 94 HOH HOH . CA 6 HOH A 50 450 95 HOH HOH . CA 6 HOH A 51 451 96 HOH HOH . CA 6 HOH A 52 452 99 HOH HOH . CA 6 HOH A 53 453 100 HOH HOH . CA 6 HOH A 54 454 101 HOH HOH . CA 6 HOH A 55 455 102 HOH HOH . CA 6 HOH A 56 456 103 HOH HOH . CA 6 HOH A 57 457 104 HOH HOH . CA 6 HOH A 58 458 105 HOH HOH . CA 6 HOH A 59 459 125 HOH HOH . CA 6 HOH A 60 460 127 HOH HOH . CA 6 HOH A 61 461 133 HOH HOH . CA 6 HOH A 62 462 134 HOH HOH . CA 6 HOH A 63 463 135 HOH HOH . CA 6 HOH A 64 464 138 HOH HOH . DA 6 HOH B 1 401 2 HOH HOH . DA 6 HOH B 2 402 4 HOH HOH . DA 6 HOH B 3 403 6 HOH HOH . DA 6 HOH B 4 404 9 HOH HOH . DA 6 HOH B 5 405 15 HOH HOH . DA 6 HOH B 6 406 16 HOH HOH . DA 6 HOH B 7 407 17 HOH HOH . DA 6 HOH B 8 408 19 HOH HOH . DA 6 HOH B 9 409 20 HOH HOH . DA 6 HOH B 10 410 26 HOH HOH . DA 6 HOH B 11 411 28 HOH HOH . DA 6 HOH B 12 412 29 HOH HOH . DA 6 HOH B 13 413 32 HOH HOH . DA 6 HOH B 14 414 34 HOH HOH . DA 6 HOH B 15 415 36 HOH HOH . DA 6 HOH B 16 416 37 HOH HOH . DA 6 HOH B 17 417 38 HOH HOH . DA 6 HOH B 18 418 41 HOH HOH . DA 6 HOH B 19 419 43 HOH HOH . DA 6 HOH B 20 420 45 HOH HOH . DA 6 HOH B 21 421 46 HOH HOH . DA 6 HOH B 22 422 53 HOH HOH . DA 6 HOH B 23 423 55 HOH HOH . DA 6 HOH B 24 424 56 HOH HOH . DA 6 HOH B 25 425 59 HOH HOH . DA 6 HOH B 26 426 61 HOH HOH . DA 6 HOH B 27 427 63 HOH HOH . DA 6 HOH B 28 428 66 HOH HOH . DA 6 HOH B 29 429 67 HOH HOH . DA 6 HOH B 30 430 68 HOH HOH . DA 6 HOH B 31 431 69 HOH HOH . DA 6 HOH B 32 432 70 HOH HOH . DA 6 HOH B 33 433 71 HOH HOH . DA 6 HOH B 34 434 75 HOH HOH . DA 6 HOH B 35 435 76 HOH HOH . DA 6 HOH B 36 436 82 HOH HOH . DA 6 HOH B 37 437 83 HOH HOH . DA 6 HOH B 38 438 84 HOH HOH . DA 6 HOH B 39 439 85 HOH HOH . DA 6 HOH B 40 440 86 HOH HOH . DA 6 HOH B 41 441 87 HOH HOH . DA 6 HOH B 42 442 88 HOH HOH . DA 6 HOH B 43 443 89 HOH HOH . DA 6 HOH B 44 444 90 HOH HOH . DA 6 HOH B 45 445 97 HOH HOH . DA 6 HOH B 46 446 98 HOH HOH . DA 6 HOH B 47 447 106 HOH HOH . DA 6 HOH B 48 448 107 HOH HOH . DA 6 HOH B 49 449 108 HOH HOH . DA 6 HOH B 50 450 109 HOH HOH . DA 6 HOH B 51 451 110 HOH HOH . DA 6 HOH B 52 452 111 HOH HOH . DA 6 HOH B 53 453 112 HOH HOH . DA 6 HOH B 54 454 113 HOH HOH . DA 6 HOH B 55 455 114 HOH HOH . DA 6 HOH B 56 456 115 HOH HOH . DA 6 HOH B 57 457 116 HOH HOH . DA 6 HOH B 58 458 117 HOH HOH . DA 6 HOH B 59 459 118 HOH HOH . DA 6 HOH B 60 460 119 HOH HOH . DA 6 HOH B 61 461 120 HOH HOH . DA 6 HOH B 62 462 121 HOH HOH . DA 6 HOH B 63 463 122 HOH HOH . DA 6 HOH B 64 464 123 HOH HOH . DA 6 HOH B 65 465 124 HOH HOH . DA 6 HOH B 66 466 126 HOH HOH . DA 6 HOH B 67 467 128 HOH HOH . DA 6 HOH B 68 468 129 HOH HOH . DA 6 HOH B 69 469 130 HOH HOH . DA 6 HOH B 70 470 131 HOH HOH . DA 6 HOH B 71 471 132 HOH HOH . DA 6 HOH B 72 472 136 HOH HOH . DA 6 HOH B 73 473 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . Q 3 36.597 -1.361 5.241 0.8 32.67 ? C1 EDO 303 B 1 HETATM 2 O O1 EDO . . . Q 3 37.734 -0.514 5.191 0.8 32.95 ? O1 EDO 303 B 1 HETATM 3 C C2 EDO . . . Q 3 35.833 -1.282 3.899 0.8 31.98 ? C2 EDO 303 B 1 HETATM 4 O O2 EDO . . . Q 3 35.416 0.053 3.668 0.8 31.47 ? O2 EDO 303 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #