data_4FN9 # _model_server_result.job_id GKdnaWrjqeFUISrIk-MTXw _model_server_result.datetime_utc '2024-11-25 00:34:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fn9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 4FN9 # _exptl.entry_id 4FN9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.462 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROGESTERONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FN9 _cell.length_a 53.472 _cell.length_b 112.108 _cell.length_c 132.846 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FN9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1 B,I,J,K,M 1 2 A,C,D,E,F,G,H,L 2 1 B,I,J,K,M 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1/2,-y,z+1/2 -1 0 0 0 -1 0 0 0 1 -26.736 0 66.423 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 I N N # _chem_comp.formula 'C21 H30 O2' _chem_comp.formula_weight 314.462 _chem_comp.id STR _chem_comp.mon_nstd_flag . _chem_comp.name PROGESTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 STR sing 435 n n C1 C10 STR sing 436 n n C1 H11 STR sing 437 n n C1 H12 STR sing 438 n n C2 C3 STR sing 439 n n C2 H21 STR sing 440 n n C2 H22 STR sing 441 n n C3 O3 STR doub 442 n n C3 C4 STR sing 443 n n C4 C5 STR doub 444 n n C4 H4 STR sing 445 n n C5 C6 STR sing 446 n n C5 C10 STR sing 447 n n C6 C7 STR sing 448 n n C6 H61 STR sing 449 n n C6 H62 STR sing 450 n n C7 C8 STR sing 451 n n C7 H71 STR sing 452 n n C7 H72 STR sing 453 n n C8 C9 STR sing 454 n n C8 C14 STR sing 455 n n C8 H8 STR sing 456 n n C9 C10 STR sing 457 n n C9 C11 STR sing 458 n n C9 H9 STR sing 459 n n C10 C19 STR sing 460 n n C11 C12 STR sing 461 n n C11 H111 STR sing 462 n n C11 H112 STR sing 463 n n C12 C13 STR sing 464 n n C12 H121 STR sing 465 n n C12 H122 STR sing 466 n n C13 C14 STR sing 467 n n C13 C17 STR sing 468 n n C13 C18 STR sing 469 n n C14 C15 STR sing 470 n n C14 H14 STR sing 471 n n C15 C16 STR sing 472 n n C15 H151 STR sing 473 n n C15 H152 STR sing 474 n n C16 C17 STR sing 475 n n C16 H161 STR sing 476 n n C16 H162 STR sing 477 n n C17 C20 STR sing 478 n n C17 H17 STR sing 479 n n C18 H181 STR sing 480 n n C18 H182 STR sing 481 n n C18 H183 STR sing 482 n n C19 H191 STR sing 483 n n C19 H192 STR sing 484 n n C19 H193 STR sing 485 n n C20 O20 STR doub 486 n n C20 C21 STR sing 487 n n C21 H211 STR sing 488 n n C21 H212 STR sing 489 n n C21 H213 STR sing 490 n n # _atom_sites.entry_id 4FN9 _atom_sites.fract_transf_matrix[1][1] 0.018701 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STR A 1 301 2 STR STR . D 3 GOL A 1 302 1 GOL GOL . E 3 GOL A 1 303 2 GOL GOL . F 4 MES A 1 304 1 MES MES . G 5 CPS A 1 305 2 CPS CPS . H 6 SO4 A 1 306 1 SO4 SO4 . I 2 STR B 1 301 1 STR STR . J 4 MES B 1 302 2 MES MES . K 5 CPS B 1 303 1 CPS CPS . L 7 HOH A 1 401 3 HOH HOH . L 7 HOH A 2 402 5 HOH HOH . L 7 HOH A 3 403 6 HOH HOH . L 7 HOH A 4 404 8 HOH HOH . L 7 HOH A 5 405 9 HOH HOH . L 7 HOH A 6 406 10 HOH HOH . L 7 HOH A 7 407 11 HOH HOH . L 7 HOH A 8 408 12 HOH HOH . M 7 HOH B 1 401 1 HOH HOH . M 7 HOH B 2 402 2 HOH HOH . M 7 HOH B 3 403 4 HOH HOH . M 7 HOH B 4 404 7 HOH HOH . M 7 HOH B 5 405 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STR . . . I 2 -6.21 27.787 -50.451 1 56.11 ? C1 STR 301 B 1 HETATM 2 C C2 STR . . . I 2 -5.488 28.325 -51.644 1 51.61 ? C2 STR 301 B 1 HETATM 3 C C3 STR . . . I 2 -5.074 27.301 -52.659 1 54.27 ? C3 STR 301 B 1 HETATM 4 O O3 STR . . . I 2 -4.982 27.613 -53.85 1 57.76 ? O3 STR 301 B 1 HETATM 5 C C4 STR . . . I 2 -4.763 25.905 -52.216 1 51.94 ? C4 STR 301 B 1 HETATM 6 C C5 STR . . . I 2 -4.877 25.616 -50.749 1 60.47 ? C5 STR 301 B 1 HETATM 7 C C6 STR . . . I 2 -4.635 24.232 -50.173 1 54.27 ? C6 STR 301 B 1 HETATM 8 C C7 STR . . . I 2 -4.19 24.267 -48.723 1 54.72 ? C7 STR 301 B 1 HETATM 9 C C8 STR . . . I 2 -4.977 25.282 -47.855 1 60.19 ? C8 STR 301 B 1 HETATM 10 C C9 STR . . . I 2 -5.122 26.646 -48.52 1 54.11 ? C9 STR 301 B 1 HETATM 11 C C10 STR . . . I 2 -5.774 26.452 -49.889 1 58.81 ? C10 STR 301 B 1 HETATM 12 C C11 STR . . . I 2 -5.829 27.698 -47.624 1 53.09 ? C11 STR 301 B 1 HETATM 13 C C12 STR . . . I 2 -5.257 27.759 -46.216 1 56.5 ? C12 STR 301 B 1 HETATM 14 C C13 STR . . . I 2 -5.135 26.358 -45.517 1 61.42 ? C13 STR 301 B 1 HETATM 15 C C14 STR . . . I 2 -4.412 25.366 -46.39 1 61.27 ? C14 STR 301 B 1 HETATM 16 C C15 STR . . . I 2 -4.304 24.085 -45.602 1 56.04 ? C15 STR 301 B 1 HETATM 17 C C16 STR . . . I 2 -4.481 24.467 -44.152 1 59.38 ? C16 STR 301 B 1 HETATM 18 C C17 STR . . . I 2 -4.651 26.033 -44.134 1 62.71 ? C17 STR 301 B 1 HETATM 19 C C18 STR . . . I 2 -6.568 26.113 -45.5 1 56.8 ? C18 STR 301 B 1 HETATM 20 C C19 STR . . . I 2 -7.103 25.73 -49.767 1 53.26 ? C19 STR 301 B 1 HETATM 21 C C20 STR . . . I 2 -5.406 26.528 -42.853 1 59.85 ? C20 STR 301 B 1 HETATM 22 O O20 STR . . . I 2 -5.888 25.736 -42.07 1 60.25 ? O20 STR 301 B 1 HETATM 23 C C21 STR . . . I 2 -5.534 28.023 -42.547 1 53.85 ? C21 STR 301 B 1 # _model_server_stats.io_time_ms 107 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #