data_4FNE # _model_server_result.job_id GRPko9kuc-Z8bEMIGVwd6w _model_server_result.datetime_utc '2024-11-24 22:47:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 4FNE # _exptl.entry_id 4FNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FNE _cell.length_a 52.795 _cell.length_b 111.618 _cell.length_c 130.765 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 289 n n C1 C2 GOL sing 290 n n C1 H11 GOL sing 291 n n C1 H12 GOL sing 292 n n O1 HO1 GOL sing 293 n n C2 O2 GOL sing 294 n n C2 C3 GOL sing 295 n n C2 H2 GOL sing 296 n n O2 HO2 GOL sing 297 n n C3 O3 GOL sing 298 n n C3 H31 GOL sing 299 n n C3 H32 GOL sing 300 n n O3 HO3 GOL sing 301 n n # _atom_sites.entry_id 4FNE _atom_sites.fract_transf_matrix[1][1] 0.018941 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007647 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1CA A 1 301 297 1CA 1CA . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 4 GOL A 1 304 1 GOL GOL . F 4 GOL A 1 305 2 GOL GOL . G 5 MES A 1 306 1 MES MES . H 6 CPS A 1 307 2647 CPS CPS . I 7 HOH A 1 401 1 HOH HOH . I 7 HOH A 2 402 2 HOH HOH . I 7 HOH A 3 403 3 HOH HOH . I 7 HOH A 4 404 4 HOH HOH . I 7 HOH A 5 405 5 HOH HOH . I 7 HOH A 6 406 6 HOH HOH . I 7 HOH A 7 407 7 HOH HOH . I 7 HOH A 8 408 8 HOH HOH . I 7 HOH A 9 409 9 HOH HOH . I 7 HOH A 10 410 10 HOH HOH . I 7 HOH A 11 411 11 HOH HOH . I 7 HOH A 12 412 12 HOH HOH . I 7 HOH A 13 413 13 HOH HOH . I 7 HOH A 14 414 14 HOH HOH . I 7 HOH A 15 415 15 HOH HOH . I 7 HOH A 16 416 16 HOH HOH . I 7 HOH A 17 417 17 HOH HOH . I 7 HOH A 18 418 18 HOH HOH . I 7 HOH A 19 419 19 HOH HOH . I 7 HOH A 20 420 20 HOH HOH . I 7 HOH A 21 421 21 HOH HOH . I 7 HOH A 22 422 22 HOH HOH . I 7 HOH A 23 423 23 HOH HOH . I 7 HOH A 24 424 24 HOH HOH . I 7 HOH A 25 425 25 HOH HOH . I 7 HOH A 26 426 26 HOH HOH . I 7 HOH A 27 427 27 HOH HOH . I 7 HOH A 28 428 28 HOH HOH . I 7 HOH A 29 429 29 HOH HOH . I 7 HOH A 30 430 30 HOH HOH . I 7 HOH A 31 431 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 5.899 1.71 -4.105 1 89.21 ? C1 GOL 304 A 1 HETATM 2 O O1 GOL . . . E 4 7.23 1.827 -4.618 1 81.94 ? O1 GOL 304 A 1 HETATM 3 C C2 GOL . . . E 4 5.785 0.332 -3.465 1 98.33 ? C2 GOL 304 A 1 HETATM 4 O O2 GOL . . . E 4 6.638 0.294 -2.313 1 89.57 ? O2 GOL 304 A 1 HETATM 5 C C3 GOL . . . E 4 4.336 0.029 -3.071 1 96.37 ? C3 GOL 304 A 1 HETATM 6 O O3 GOL . . . E 4 4.229 -1.375 -2.801 1 84.29 ? O3 GOL 304 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 1012 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #