data_4FP9
#
_model_server_result.job_id            ooH8C1wwga23RlHPT000ng 
_model_server_result.datetime_utc      '2024-12-22 02:15:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4fp9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":401}' 
#
_entry.id    4FP9 
#
_exptl.entry_id    4FP9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.437 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYLMETHIONINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4FP9 
_cell.length_a            78.76 
_cell.length_b            82.27 
_cell.length_c            507.57 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4FP9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? octameric 8 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
PISA dimeric 2 software_defined_assembly 4 
PISA dimeric 2 software_defined_assembly 5 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 1 1 
A,B,I,J,K 2 1 
C,E,L,M,R 3 1 
D,G,N,O,P,Q 4 1 
F,H,S,T 5 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 L N N 
? 3 N N N 
? 3 S N N 
#
_chem_comp.formula           'C15 H22 N6 O5 S' 
_chem_comp.formula_weight    398.437 
_chem_comp.id                SAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-ADENOSYLMETHIONINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAM sing 275 n n 
N HN1 SAM sing 276 n n 
N HN2 SAM sing 277 n n 
CA C SAM sing 278 n n 
CA CB SAM sing 279 n n 
CA HA SAM sing 280 n n 
C O SAM doub 281 n n 
C OXT SAM sing 282 n n 
CB CG SAM sing 283 n n 
CB HB1 SAM sing 284 n n 
CB HB2 SAM sing 285 n n 
CG SD SAM sing 286 n n 
CG HG1 SAM sing 287 n n 
CG HG2 SAM sing 288 n n 
SD CE SAM sing 289 n n 
SD C5' SAM sing 290 n n 
CE HE1 SAM sing 291 n n 
CE HE2 SAM sing 292 n n 
CE HE3 SAM sing 293 n n 
C5' C4' SAM sing 294 n n 
C5' "H5'1" SAM sing 295 n n 
C5' "H5'2" SAM sing 296 n n 
C4' O4' SAM sing 297 n n 
C4' C3' SAM sing 298 n n 
C4' H4' SAM sing 299 n n 
O4' C1' SAM sing 300 n n 
C3' O3' SAM sing 301 n n 
C3' C2' SAM sing 302 n n 
C3' H3' SAM sing 303 n n 
O3' HO3' SAM sing 304 n n 
C2' O2' SAM sing 305 n n 
C2' C1' SAM sing 306 n n 
C2' H2' SAM sing 307 n n 
O2' HO2' SAM sing 308 n n 
C1' N9 SAM sing 309 n n 
C1' H1' SAM sing 310 n n 
N9 C8 SAM sing 311 n y 
N9 C4 SAM sing 312 n y 
C8 N7 SAM doub 313 n y 
C8 H8 SAM sing 314 n n 
N7 C5 SAM sing 315 n y 
C5 C6 SAM sing 316 n y 
C5 C4 SAM doub 317 n y 
C6 N6 SAM sing 318 n n 
C6 N1 SAM doub 319 n y 
N6 HN61 SAM sing 320 n n 
N6 HN62 SAM sing 321 n n 
N1 C2 SAM sing 322 n y 
C2 N3 SAM doub 323 n y 
C2 H2 SAM sing 324 n n 
N3 C4 SAM sing 325 n y 
#
_atom_sites.entry_id                     4FP9 
_atom_sites.fract_transf_matrix[1][1]    0.012697 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012155 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00197 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 SAM A 1 401 465 SAM SAM . 
J 4 SO4 A 1 402 2 SO4 SO4 . 
K 4 SO4 B 1 401 7 SO4 SO4 . 
L 3 SAM C 1 401 465 SAM SAM . 
M 4 SO4 C 1 402 1 SO4 SO4 . 
N 3 SAM D 1 401 465 SAM SAM . 
O 4 SO4 D 1 402 3 SO4 SO4 . 
P 4 SO4 D 1 403 4 SO4 SO4 . 
Q 4 SO4 D 1 404 5 SO4 SO4 . 
R 4 SO4 E 1 401 8 SO4 SO4 . 
S 3 SAM F 1 401 465 SAM SAM . 
T 4 SO4 F 1 402 6 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAM . . . L 3 130.591 107.541 75.687 0.69 28.54 ? N SAM 401 C 1 
HETATM 2 C CA SAM . . . L 3 131.693 107.744 76.637 0.69 30.53 ? CA SAM 401 C 1 
HETATM 3 C C SAM . . . L 3 132.003 106.464 77.424 0.69 40.92 ? C SAM 401 C 1 
HETATM 4 O O SAM . . . L 3 133.192 106.241 77.714 0.69 42.07 ? O SAM 401 C 1 
HETATM 5 O OXT SAM . . . L 3 131.044 105.71 77.693 0.69 41.09 ? OXT SAM 401 C 1 
HETATM 6 C CB SAM . . . L 3 131.431 108.896 77.647 0.69 30.25 ? CB SAM 401 C 1 
HETATM 7 C CG SAM . . . L 3 131.105 110.246 76.918 0.69 29.95 ? CG SAM 401 C 1 
HETATM 8 S SD SAM . . . L 3 131.359 111.611 78.053 0.69 29.53 ? SD SAM 401 C 1 
HETATM 9 C CE SAM . . . L 3 129.997 111.367 79.128 0.69 29.25 ? CE SAM 401 C 1 
HETATM 10 C C5' SAM . . . L 3 130.801 113.071 77.158 0.69 28.99 ? C5' SAM 401 C 1 
HETATM 11 C C4' SAM . . . L 3 131.804 113.511 76.13 0.69 28.67 ? C4' SAM 401 C 1 
HETATM 12 O O4' SAM . . . L 3 131.347 114.608 75.322 0.69 28.38 ? O4' SAM 401 C 1 
HETATM 13 C C3' SAM . . . L 3 133.142 113.967 76.722 0.69 29.23 ? C3' SAM 401 C 1 
HETATM 14 O O3' SAM . . . L 3 134.123 112.974 76.435 0.69 29.83 ? O3' SAM 401 C 1 
HETATM 15 C C2' SAM . . . L 3 133.42 115.319 76.029 0.69 28.87 ? C2' SAM 401 C 1 
HETATM 16 O O2' SAM . . . L 3 134.768 115.534 75.612 0.69 28.92 ? O2' SAM 401 C 1 
HETATM 17 C C1' SAM . . . L 3 132.514 115.21 74.82 0.69 28.43 ? C1' SAM 401 C 1 
HETATM 18 N N9 SAM . . . L 3 132.165 116.451 74.139 0.69 28.03 ? N9 SAM 401 C 1 
HETATM 19 C C8 SAM . . . L 3 131.935 117.688 74.682 0.69 28.04 ? C8 SAM 401 C 1 
HETATM 20 N N7 SAM . . . L 3 131.522 118.583 73.816 0.69 27.99 ? N7 SAM 401 C 1 
HETATM 21 C C5 SAM . . . L 3 131.487 117.887 72.616 0.69 27.73 ? C5 SAM 401 C 1 
HETATM 22 C C6 SAM . . . L 3 131.094 118.257 71.312 0.69 27.51 ? C6 SAM 401 C 1 
HETATM 23 N N6 SAM . . . L 3 130.669 119.48 70.984 0.69 27.03 ? N6 SAM 401 C 1 
HETATM 24 N N1 SAM . . . L 3 131.142 117.307 70.348 0.69 27.76 ? N1 SAM 401 C 1 
HETATM 25 C C2 SAM . . . L 3 131.554 116.076 70.673 0.69 27.57 ? C2 SAM 401 C 1 
HETATM 26 N N3 SAM . . . L 3 131.952 115.614 71.863 0.69 27.59 ? N3 SAM 401 C 1 
HETATM 27 C C4 SAM . . . L 3 131.89 116.575 72.799 0.69 27.77 ? C4 SAM 401 C 1 
#
_model_server_stats.io_time_ms              39 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#