data_4FRQ # _model_server_result.job_id RGUIInQcSfDpDQprcNUQXA _model_server_result.datetime_utc '2024-11-22 22:49:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4frq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4FRQ # _exptl.entry_id 4FRQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FRQ _cell.length_a 52.307 _cell.length_b 151.386 _cell.length_c 79.397 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FRQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.307 0 39.6985 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 149 A ASP 211 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc2 A OD1 ASP 151 A ASP 213 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc3 A OD2 ASP 151 A ASP 213 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc4 B O3B UDP . A UDP 401 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc5 B O1A UDP . A UDP 401 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 261 n n C1 C2 PEG sing 262 n n C1 H11 PEG sing 263 n n C1 H12 PEG sing 264 n n O1 HO1 PEG sing 265 n n C2 O2 PEG sing 266 n n C2 H21 PEG sing 267 n n C2 H22 PEG sing 268 n n O2 C3 PEG sing 269 n n C3 C4 PEG sing 270 n n C3 H31 PEG sing 271 n n C3 H32 PEG sing 272 n n C4 O4 PEG sing 273 n n C4 H41 PEG sing 274 n n C4 H42 PEG sing 275 n n O4 HO4 PEG sing 276 n n # _atom_sites.entry_id 4FRQ _atom_sites.fract_transf_matrix[1][1] 0.019118 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006606 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP A 1 401 1 UDP UDP . C 3 PEG A 1 402 1 PEG PEG . D 4 MN A 1 403 1 MN MN . E 5 GAL A 1 404 2 GAL GAL . F 6 HOH A 1 501 1 HOH HOH . F 6 HOH A 2 502 2 HOH HOH . F 6 HOH A 3 503 3 HOH HOH . F 6 HOH A 4 504 4 HOH HOH . F 6 HOH A 5 505 5 HOH HOH . F 6 HOH A 6 506 6 HOH HOH . F 6 HOH A 7 507 7 HOH HOH . F 6 HOH A 8 508 8 HOH HOH . F 6 HOH A 9 509 9 HOH HOH . F 6 HOH A 10 510 10 HOH HOH . F 6 HOH A 11 511 11 HOH HOH . F 6 HOH A 12 512 12 HOH HOH . F 6 HOH A 13 513 13 HOH HOH . F 6 HOH A 14 514 14 HOH HOH . F 6 HOH A 15 515 15 HOH HOH . F 6 HOH A 16 516 16 HOH HOH . F 6 HOH A 17 517 17 HOH HOH . F 6 HOH A 18 518 18 HOH HOH . F 6 HOH A 19 519 19 HOH HOH . F 6 HOH A 20 520 20 HOH HOH . F 6 HOH A 21 521 21 HOH HOH . F 6 HOH A 22 522 22 HOH HOH . F 6 HOH A 23 523 23 HOH HOH . F 6 HOH A 24 524 24 HOH HOH . F 6 HOH A 25 525 25 HOH HOH . F 6 HOH A 26 526 26 HOH HOH . F 6 HOH A 27 527 27 HOH HOH . F 6 HOH A 28 528 28 HOH HOH . F 6 HOH A 29 529 29 HOH HOH . F 6 HOH A 30 530 30 HOH HOH . F 6 HOH A 31 531 31 HOH HOH . F 6 HOH A 32 532 32 HOH HOH . F 6 HOH A 33 533 33 HOH HOH . F 6 HOH A 34 534 34 HOH HOH . F 6 HOH A 35 535 35 HOH HOH . F 6 HOH A 36 536 36 HOH HOH . F 6 HOH A 37 537 37 HOH HOH . F 6 HOH A 38 538 38 HOH HOH . F 6 HOH A 39 539 39 HOH HOH . F 6 HOH A 40 540 40 HOH HOH . F 6 HOH A 41 541 41 HOH HOH . F 6 HOH A 42 542 42 HOH HOH . F 6 HOH A 43 543 43 HOH HOH . F 6 HOH A 44 544 44 HOH HOH . F 6 HOH A 45 545 45 HOH HOH . F 6 HOH A 46 546 46 HOH HOH . F 6 HOH A 47 547 47 HOH HOH . F 6 HOH A 48 548 48 HOH HOH . F 6 HOH A 49 549 49 HOH HOH . F 6 HOH A 50 550 50 HOH HOH . F 6 HOH A 51 551 51 HOH HOH . F 6 HOH A 52 552 52 HOH HOH . F 6 HOH A 53 553 53 HOH HOH . F 6 HOH A 54 554 54 HOH HOH . F 6 HOH A 55 555 55 HOH HOH . F 6 HOH A 56 556 56 HOH HOH . F 6 HOH A 57 557 57 HOH HOH . F 6 HOH A 58 558 58 HOH HOH . F 6 HOH A 59 559 59 HOH HOH . F 6 HOH A 60 560 60 HOH HOH . F 6 HOH A 61 561 61 HOH HOH . F 6 HOH A 62 562 62 HOH HOH . F 6 HOH A 63 563 63 HOH HOH . F 6 HOH A 64 564 64 HOH HOH . F 6 HOH A 65 565 65 HOH HOH . F 6 HOH A 66 566 66 HOH HOH . F 6 HOH A 67 567 67 HOH HOH . F 6 HOH A 68 568 68 HOH HOH . F 6 HOH A 69 569 69 HOH HOH . F 6 HOH A 70 570 70 HOH HOH . F 6 HOH A 71 571 71 HOH HOH . F 6 HOH A 72 572 72 HOH HOH . F 6 HOH A 73 573 73 HOH HOH . F 6 HOH A 74 574 74 HOH HOH . F 6 HOH A 75 575 75 HOH HOH . F 6 HOH A 76 576 76 HOH HOH . F 6 HOH A 77 577 77 HOH HOH . F 6 HOH A 78 578 78 HOH HOH . F 6 HOH A 79 579 79 HOH HOH . F 6 HOH A 80 580 80 HOH HOH . F 6 HOH A 81 581 81 HOH HOH . F 6 HOH A 82 582 82 HOH HOH . F 6 HOH A 83 583 83 HOH HOH . F 6 HOH A 84 584 84 HOH HOH . F 6 HOH A 85 585 85 HOH HOH . F 6 HOH A 86 586 86 HOH HOH . F 6 HOH A 87 587 87 HOH HOH . F 6 HOH A 88 588 88 HOH HOH . F 6 HOH A 89 589 89 HOH HOH . F 6 HOH A 90 590 90 HOH HOH . F 6 HOH A 91 591 91 HOH HOH . F 6 HOH A 92 592 92 HOH HOH . F 6 HOH A 93 593 93 HOH HOH . F 6 HOH A 94 594 94 HOH HOH . F 6 HOH A 95 595 95 HOH HOH . F 6 HOH A 96 596 96 HOH HOH . F 6 HOH A 97 597 97 HOH HOH . F 6 HOH A 98 598 98 HOH HOH . F 6 HOH A 99 599 99 HOH HOH . F 6 HOH A 100 600 100 HOH HOH . F 6 HOH A 101 601 101 HOH HOH . F 6 HOH A 102 602 102 HOH HOH . F 6 HOH A 103 603 103 HOH HOH . F 6 HOH A 104 604 104 HOH HOH . F 6 HOH A 105 605 105 HOH HOH . F 6 HOH A 106 606 106 HOH HOH . F 6 HOH A 107 607 107 HOH HOH . F 6 HOH A 108 608 108 HOH HOH . F 6 HOH A 109 609 109 HOH HOH . F 6 HOH A 110 610 110 HOH HOH . F 6 HOH A 111 611 111 HOH HOH . F 6 HOH A 112 612 112 HOH HOH . F 6 HOH A 113 613 113 HOH HOH . F 6 HOH A 114 614 114 HOH HOH . F 6 HOH A 115 615 115 HOH HOH . F 6 HOH A 116 616 116 HOH HOH . F 6 HOH A 117 617 117 HOH HOH . F 6 HOH A 118 618 118 HOH HOH . F 6 HOH A 119 619 119 HOH HOH . F 6 HOH A 120 620 120 HOH HOH . F 6 HOH A 121 621 121 HOH HOH . F 6 HOH A 122 622 122 HOH HOH . F 6 HOH A 123 623 123 HOH HOH . F 6 HOH A 124 624 124 HOH HOH . F 6 HOH A 125 625 125 HOH HOH . F 6 HOH A 126 626 126 HOH HOH . F 6 HOH A 127 627 127 HOH HOH . F 6 HOH A 128 628 128 HOH HOH . F 6 HOH A 129 629 129 HOH HOH . F 6 HOH A 130 630 130 HOH HOH . F 6 HOH A 131 631 131 HOH HOH . F 6 HOH A 132 632 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . C 3 6.396 14.163 19.486 1 27.22 ? C1 PEG 402 A 1 HETATM 2 O O1 PEG . . . C 3 5.991 14.838 20.698 1 29.16 ? O1 PEG 402 A 1 HETATM 3 C C2 PEG . . . C 3 7.477 13.082 19.7 1 27.18 ? C2 PEG 402 A 1 HETATM 4 O O2 PEG . . . C 3 8.82 13.494 19.244 1 24.73 ? O2 PEG 402 A 1 HETATM 5 C C3 PEG . . . C 3 9.787 12.459 19.412 1 22.93 ? C3 PEG 402 A 1 HETATM 6 C C4 PEG . . . C 3 10.466 12.168 18.069 1 22.18 ? C4 PEG 402 A 1 HETATM 7 O O4 PEG . . . C 3 9.736 11.446 17.058 1 20.53 ? O4 PEG 402 A 1 HETATM 8 H H11 PEG . . . C 3 5.52 13.708 19.018 1 27.28 ? H11 PEG 402 A 1 HETATM 9 H H12 PEG . . . C 3 6.782 14.908 18.806 1 25.8 ? H12 PEG 402 A 1 HETATM 10 H HO1 PEG . . . C 3 5.37 15.407 20.224 0 30.65 ? HO1 PEG 402 A 1 HETATM 11 H H21 PEG . . . C 3 7.516 12.816 20.757 1 26.13 ? H21 PEG 402 A 1 HETATM 12 H H22 PEG . . . C 3 7.18 12.185 19.153 1 26.43 ? H22 PEG 402 A 1 HETATM 13 H H31 PEG . . . C 3 10.528 12.753 20.156 1 22.17 ? H31 PEG 402 A 1 HETATM 14 H H32 PEG . . . C 3 9.307 11.547 19.774 1 23.08 ? H32 PEG 402 A 1 HETATM 15 H H41 PEG . . . C 3 10.746 13.122 17.631 1 19.94 ? H41 PEG 402 A 1 HETATM 16 H H42 PEG . . . C 3 11.379 11.616 18.284 1 20.57 ? H42 PEG 402 A 1 HETATM 17 H HO4 PEG . . . C 3 8.896 11.899 16.912 1 19.65 ? HO4 PEG 402 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 17 #