data_4FS1 # _model_server_result.job_id WUPgaElPRyjYxx0CBmCiGw _model_server_result.datetime_utc '2024-10-12 09:18:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fs1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":502}' # _entry.id 4FS1 # _exptl.entry_id 4FS1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FS1 _cell.length_a 97.47 _cell.length_b 97.47 _cell.length_c 203.541 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FS1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DC 17 B DC 12 1_555 A P DOC 18 B DOC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.589 ? covale ? covale2 B O3' DT 3 C DT 839 1_555 B P EFG 4 C EFG 840 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.614 ? metalc ? metalc1 A OP1 DC 17 B DC 12 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc2 C OD1 ASP 34 A ASP 34 1_555 D MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc3 C O LEU 35 A LEU 35 1_555 D MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 C O GLY 124 A GLY 124 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc5 C OD2 ASP 126 A ASP 126 1_555 D MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc6 C O SER 154 A SER 154 1_555 G NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc7 C O HIS 156 A HIS 156 1_555 G NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? metalc ? metalc8 C O LYS 237 A LYS 237 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc9 C O ILE 239 A ILE 239 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc10 C O ILE 242 A ILE 242 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc11 D MG MG . A MG 501 1_555 H O1B TTP . A TTP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc12 D MG MG . A MG 501 1_555 H O1G TTP . A TTP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc13 D MG MG . A MG 501 1_555 H O2A TTP . A TTP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc14 E MG MG . A MG 502 1_555 K O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc15 F MG MG . A MG 503 1_555 K O HOH . A HOH 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? hydrog WATSON-CRICK hydrog1 A N1 DA 12 B DA 7 1_555 B N3 DT 11 C DT 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 12 B DA 7 1_555 B O4 DT 11 C DT 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DG 13 B DG 8 1_555 B N3 DC 10 C DC 846 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N2 DG 13 B DG 8 1_555 B O2 DC 10 C DC 846 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O6 DG 13 B DG 8 1_555 B N4 DC 10 C DC 846 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DG 14 B DG 9 1_555 B N3 DC 9 C DC 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N2 DG 14 B DG 9 1_555 B O2 DC 9 C DC 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O6 DG 14 B DG 9 1_555 B N4 DC 9 C DC 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DA 15 B DA 10 1_555 B N3 DT 8 C DT 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N6 DA 15 B DA 10 1_555 B O4 DT 8 C DT 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N3 DC 16 B DC 11 1_555 B N1 DG 7 C DG 843 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N4 DC 16 B DC 11 1_555 B O6 DG 7 C DG 843 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O2 DC 16 B DC 11 1_555 B N2 DG 7 C DG 843 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 17 B DC 12 1_555 B N1 DG 6 C DG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 17 B DC 12 1_555 B O6 DG 6 C DG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 17 B DC 12 1_555 B N2 DG 6 C DG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DOC 18 B DOC 13 1_555 B N1 DG 5 C DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N4 DOC 18 B DOC 13 1_555 B O6 DG 5 C DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A O2 DOC 18 B DOC 13 1_555 B N2 DG 5 C DG 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4FS1 _atom_sites.fract_transf_matrix[1][1] 0.01026 _atom_sites.fract_transf_matrix[1][2] 0.005923 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011847 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 MG A 1 501 501 MG MG . E 3 MG A 1 502 3 MG NA . F 3 MG A 1 503 1 MG MG . G 4 NA A 1 504 504 NA NA . H 5 TTP A 1 505 505 TTP TTP . I 6 HOH B 1 101 3 HOH HOH . J 6 HOH C 1 901 102 HOH HOH . J 6 HOH C 2 902 10 HOH HOH . J 6 HOH C 3 903 11 HOH HOH . J 6 HOH C 4 904 18 HOH HOH . J 6 HOH C 5 905 59 HOH HOH . K 6 HOH A 1 601 1 HOH HOH . K 6 HOH A 2 602 2 HOH HOH . K 6 HOH A 3 603 4 HOH HOH . K 6 HOH A 4 604 5 HOH HOH . K 6 HOH A 5 605 6 HOH HOH . K 6 HOH A 6 606 7 HOH HOH . K 6 HOH A 7 607 9 HOH HOH . K 6 HOH A 8 608 14 HOH HOH . K 6 HOH A 9 609 15 HOH HOH . K 6 HOH A 10 610 18 HOH HOH . K 6 HOH A 11 611 19 HOH HOH . K 6 HOH A 12 612 20 HOH HOH . K 6 HOH A 13 613 24 HOH HOH . K 6 HOH A 14 614 26 HOH HOH . K 6 HOH A 15 615 27 HOH HOH . K 6 HOH A 16 616 29 HOH HOH . K 6 HOH A 17 617 30 HOH HOH . K 6 HOH A 18 618 32 HOH HOH . K 6 HOH A 19 619 37 HOH HOH . K 6 HOH A 20 620 38 HOH HOH . K 6 HOH A 21 621 41 HOH HOH . K 6 HOH A 22 622 43 HOH HOH . K 6 HOH A 23 623 44 HOH HOH . K 6 HOH A 24 624 45 HOH HOH . K 6 HOH A 25 625 49 HOH HOH . K 6 HOH A 26 626 50 HOH HOH . K 6 HOH A 27 627 52 HOH HOH . K 6 HOH A 28 628 54 HOH HOH . K 6 HOH A 29 629 56 HOH HOH . K 6 HOH A 30 630 58 HOH HOH . K 6 HOH A 31 631 67 HOH HOH . K 6 HOH A 32 632 69 HOH HOH . K 6 HOH A 33 633 70 HOH HOH . K 6 HOH A 34 634 2 HOH HOH . K 6 HOH A 35 635 3 HOH HOH . K 6 HOH A 36 636 4 HOH HOH . K 6 HOH A 37 637 5 HOH HOH . K 6 HOH A 38 638 9 HOH HOH . K 6 HOH A 39 639 11 HOH HOH . K 6 HOH A 40 640 12 HOH HOH . K 6 HOH A 41 641 15 HOH HOH . K 6 HOH A 42 642 16 HOH HOH . K 6 HOH A 43 643 19 HOH HOH . K 6 HOH A 44 644 23 HOH HOH . K 6 HOH A 45 645 24 HOH HOH . K 6 HOH A 46 646 25 HOH HOH . K 6 HOH A 47 647 27 HOH HOH . K 6 HOH A 48 648 28 HOH HOH . K 6 HOH A 49 649 33 HOH HOH . K 6 HOH A 50 650 35 HOH HOH . K 6 HOH A 51 651 45 HOH HOH . K 6 HOH A 52 652 49 HOH HOH . K 6 HOH A 53 653 51 HOH HOH . K 6 HOH A 54 654 52 HOH HOH . K 6 HOH A 55 655 53 HOH HOH . K 6 HOH A 56 656 54 HOH HOH . K 6 HOH A 57 657 58 HOH HOH . K 6 HOH A 58 658 63 HOH HOH . K 6 HOH A 59 659 65 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -0.468 _atom_site.Cartn_y 31.094 _atom_site.Cartn_z -6.12 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #