data_4FVG # _model_server_result.job_id h6BWWOBqBUYBrGQ4VD-trg _model_server_result.datetime_utc '2024-12-07 04:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fvg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4FVG # _exptl.entry_id 4FVG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FVG _cell.length_a 84.489 _cell.length_b 84.489 _cell.length_c 68.937 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FVG _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 89 A GLU 169 1_555 B CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc2 A OE1 GLU 89 A GLU 169 1_555 B CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc3 A ND1 HIS 92 A HIS 172 1_555 B CD CD . A CD 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc4 A ND1 HIS 92 A HIS 172 1_555 C CD CD . A CD 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc5 A ND1 HIS 92 A HIS 172 1_555 C CD CD . A CD 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc6 A NE2 HIS 93 A HIS 173 1_555 B CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc7 C CD CD . A CD 302 1_555 D O HOH . A HOH 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc8 C CD CD . A CD 302 1_555 D O HOH . A HOH 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4FVG _atom_sites.fract_transf_matrix[1][1] 0.011836 _atom_sites.fract_transf_matrix[1][2] 0.006833 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 301 1 CD CD1 . C 2 CD A 1 302 2 CD CD1 . D 3 HOH A 1 401 1 HOH HOH . D 3 HOH A 2 402 2 HOH HOH . D 3 HOH A 3 403 3 HOH HOH . D 3 HOH A 4 404 4 HOH HOH . D 3 HOH A 5 405 5 HOH HOH . D 3 HOH A 6 406 6 HOH HOH . D 3 HOH A 7 407 7 HOH HOH . D 3 HOH A 8 408 8 HOH HOH . D 3 HOH A 9 409 9 HOH HOH . D 3 HOH A 10 410 10 HOH HOH . D 3 HOH A 11 411 11 HOH HOH . D 3 HOH A 12 412 12 HOH HOH . D 3 HOH A 13 413 13 HOH HOH . D 3 HOH A 14 414 14 HOH HOH . D 3 HOH A 15 415 15 HOH HOH . D 3 HOH A 16 416 16 HOH HOH . D 3 HOH A 17 417 17 HOH HOH . D 3 HOH A 18 418 18 HOH HOH . D 3 HOH A 19 419 19 HOH HOH . D 3 HOH A 20 420 20 HOH HOH . D 3 HOH A 21 421 21 HOH HOH . D 3 HOH A 22 422 22 HOH HOH . D 3 HOH A 23 423 23 HOH HOH . D 3 HOH A 24 424 24 HOH HOH . D 3 HOH A 25 425 25 HOH HOH . D 3 HOH A 26 426 26 HOH HOH . D 3 HOH A 27 427 27 HOH HOH . D 3 HOH A 28 428 28 HOH HOH . D 3 HOH A 29 429 29 HOH HOH . D 3 HOH A 30 430 30 HOH HOH . D 3 HOH A 31 431 31 HOH HOH . D 3 HOH A 32 432 32 HOH HOH . D 3 HOH A 33 433 33 HOH HOH . D 3 HOH A 34 434 34 HOH HOH . D 3 HOH A 35 435 35 HOH HOH . D 3 HOH A 36 436 36 HOH HOH . D 3 HOH A 37 437 37 HOH HOH . D 3 HOH A 38 438 38 HOH HOH . D 3 HOH A 39 439 39 HOH HOH . D 3 HOH A 40 440 40 HOH HOH . D 3 HOH A 41 441 41 HOH HOH . D 3 HOH A 42 442 42 HOH HOH . D 3 HOH A 43 443 43 HOH HOH . D 3 HOH A 44 444 44 HOH HOH . D 3 HOH A 45 445 45 HOH HOH . D 3 HOH A 46 446 46 HOH HOH . D 3 HOH A 47 447 47 HOH HOH . D 3 HOH A 48 448 48 HOH HOH . D 3 HOH A 49 449 49 HOH HOH . D 3 HOH A 50 450 50 HOH HOH . D 3 HOH A 51 451 51 HOH HOH . D 3 HOH A 52 452 52 HOH HOH . D 3 HOH A 53 453 53 HOH HOH . D 3 HOH A 54 454 54 HOH HOH . D 3 HOH A 55 455 55 HOH HOH . D 3 HOH A 56 456 56 HOH HOH . D 3 HOH A 57 457 57 HOH HOH . D 3 HOH A 58 458 58 HOH HOH . D 3 HOH A 59 459 59 HOH HOH . D 3 HOH A 60 460 60 HOH HOH . D 3 HOH A 61 461 61 HOH HOH . D 3 HOH A 62 462 62 HOH HOH . D 3 HOH A 63 463 63 HOH HOH . D 3 HOH A 64 464 64 HOH HOH . D 3 HOH A 65 465 65 HOH HOH . D 3 HOH A 66 466 66 HOH HOH . D 3 HOH A 67 467 67 HOH HOH . D 3 HOH A 68 468 68 HOH HOH . D 3 HOH A 69 469 69 HOH HOH . D 3 HOH A 70 470 70 HOH HOH . D 3 HOH A 71 471 71 HOH HOH . D 3 HOH A 72 472 72 HOH HOH . D 3 HOH A 73 473 73 HOH HOH . D 3 HOH A 74 474 74 HOH HOH . D 3 HOH A 75 475 75 HOH HOH . D 3 HOH A 76 476 76 HOH HOH . D 3 HOH A 77 477 77 HOH HOH . D 3 HOH A 78 478 78 HOH HOH . D 3 HOH A 79 479 79 HOH HOH . D 3 HOH A 80 480 80 HOH HOH . D 3 HOH A 81 481 81 HOH HOH . D 3 HOH A 82 482 82 HOH HOH . D 3 HOH A 83 483 83 HOH HOH . D 3 HOH A 84 484 84 HOH HOH . D 3 HOH A 85 485 85 HOH HOH . D 3 HOH A 86 486 86 HOH HOH . D 3 HOH A 87 487 87 HOH HOH . D 3 HOH A 88 488 88 HOH HOH . D 3 HOH A 89 489 89 HOH HOH . D 3 HOH A 90 490 90 HOH HOH . D 3 HOH A 91 491 91 HOH HOH . D 3 HOH A 92 492 92 HOH HOH . D 3 HOH A 93 493 93 HOH HOH . D 3 HOH A 94 494 94 HOH HOH . D 3 HOH A 95 495 95 HOH HOH . D 3 HOH A 96 496 96 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -18.367 _atom_site.Cartn_y -34.376 _atom_site.Cartn_z -11.11 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 35.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #