data_4FVP # _model_server_result.job_id Ymrkg0N772K_1Yw19uIiLg _model_server_result.datetime_utc '2024-11-08 09:49:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fvp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":902}' # _entry.id 4FVP # _exptl.entry_id 4FVP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.42 _cell.angle_gamma 90 _cell.entry_id 4FVP _cell.length_a 44.362 _cell.length_b 57.143 _cell.length_c 60.996 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FVP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4FVP _atom_sites.fract_transf_matrix[1][1] 0.022542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008392 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 901 1 GOL GOL . C 2 GOL A 1 902 1 GOL GOL . D 3 HOH A 1 1001 8 HOH HOH . D 3 HOH A 2 1002 9 HOH HOH . D 3 HOH A 3 1003 10 HOH HOH . D 3 HOH A 4 1004 11 HOH HOH . D 3 HOH A 5 1005 13 HOH HOH . D 3 HOH A 6 1006 14 HOH HOH . D 3 HOH A 7 1007 15 HOH HOH . D 3 HOH A 8 1008 16 HOH HOH . D 3 HOH A 9 1009 17 HOH HOH . D 3 HOH A 10 1010 18 HOH HOH . D 3 HOH A 11 1011 19 HOH HOH . D 3 HOH A 12 1012 20 HOH HOH . D 3 HOH A 13 1013 22 HOH HOH . D 3 HOH A 14 1014 23 HOH HOH . D 3 HOH A 15 1015 24 HOH HOH . D 3 HOH A 16 1016 25 HOH HOH . D 3 HOH A 17 1017 26 HOH HOH . D 3 HOH A 18 1018 27 HOH HOH . D 3 HOH A 19 1019 31 HOH HOH . D 3 HOH A 20 1020 32 HOH HOH . D 3 HOH A 21 1021 34 HOH HOH . D 3 HOH A 22 1022 36 HOH HOH . D 3 HOH A 23 1023 37 HOH HOH . D 3 HOH A 24 1024 38 HOH HOH . D 3 HOH A 25 1025 39 HOH HOH . D 3 HOH A 26 1026 41 HOH HOH . D 3 HOH A 27 1027 42 HOH HOH . D 3 HOH A 28 1028 43 HOH HOH . D 3 HOH A 29 1029 48 HOH HOH . D 3 HOH A 30 1030 50 HOH HOH . D 3 HOH A 31 1031 52 HOH HOH . D 3 HOH A 32 1032 53 HOH HOH . D 3 HOH A 33 1033 57 HOH HOH . D 3 HOH A 34 1034 70 HOH HOH . D 3 HOH A 35 1035 73 HOH HOH . D 3 HOH A 36 1036 74 HOH HOH . D 3 HOH A 37 1037 75 HOH HOH . D 3 HOH A 38 1038 76 HOH HOH . D 3 HOH A 39 1039 79 HOH HOH . D 3 HOH A 40 1040 80 HOH HOH . D 3 HOH A 41 1041 81 HOH HOH . D 3 HOH A 42 1042 82 HOH HOH . D 3 HOH A 43 1043 83 HOH HOH . D 3 HOH A 44 1044 84 HOH HOH . D 3 HOH A 45 1045 85 HOH HOH . D 3 HOH A 46 1046 86 HOH HOH . D 3 HOH A 47 1047 88 HOH HOH . D 3 HOH A 48 1048 89 HOH HOH . D 3 HOH A 49 1049 90 HOH HOH . D 3 HOH A 50 1050 91 HOH HOH . D 3 HOH A 51 1051 92 HOH HOH . D 3 HOH A 52 1052 93 HOH HOH . D 3 HOH A 53 1053 94 HOH HOH . D 3 HOH A 54 1054 95 HOH HOH . D 3 HOH A 55 1055 96 HOH HOH . D 3 HOH A 56 1056 97 HOH HOH . D 3 HOH A 57 1057 98 HOH HOH . D 3 HOH A 58 1058 99 HOH HOH . D 3 HOH A 59 1059 100 HOH HOH . D 3 HOH A 60 1060 101 HOH HOH . D 3 HOH A 61 1061 102 HOH HOH . D 3 HOH A 62 1062 103 HOH HOH . D 3 HOH A 63 1063 104 HOH HOH . D 3 HOH A 64 1064 105 HOH HOH . D 3 HOH A 65 1065 106 HOH HOH . D 3 HOH A 66 1066 107 HOH HOH . D 3 HOH A 67 1067 108 HOH HOH . D 3 HOH A 68 1068 109 HOH HOH . D 3 HOH A 69 1069 110 HOH HOH . D 3 HOH A 70 1070 112 HOH HOH . D 3 HOH A 71 1071 113 HOH HOH . D 3 HOH A 72 1072 114 HOH HOH . D 3 HOH A 73 1073 115 HOH HOH . D 3 HOH A 74 1074 116 HOH HOH . D 3 HOH A 75 1075 117 HOH HOH . D 3 HOH A 76 1076 118 HOH HOH . D 3 HOH A 77 1077 119 HOH HOH . D 3 HOH A 78 1078 120 HOH HOH . D 3 HOH A 79 1079 121 HOH HOH . D 3 HOH A 80 1080 122 HOH HOH . D 3 HOH A 81 1081 123 HOH HOH . D 3 HOH A 82 1082 124 HOH HOH . D 3 HOH A 83 1083 125 HOH HOH . D 3 HOH A 84 1084 126 HOH HOH . D 3 HOH A 85 1085 129 HOH HOH . D 3 HOH A 86 1086 130 HOH HOH . D 3 HOH A 87 1087 131 HOH HOH . D 3 HOH A 88 1088 132 HOH HOH . D 3 HOH A 89 1089 133 HOH HOH . D 3 HOH A 90 1090 134 HOH HOH . D 3 HOH A 91 1091 135 HOH HOH . D 3 HOH A 92 1092 136 HOH HOH . D 3 HOH A 93 1093 137 HOH HOH . D 3 HOH A 94 1094 138 HOH HOH . D 3 HOH A 95 1095 139 HOH HOH . D 3 HOH A 96 1096 140 HOH HOH . D 3 HOH A 97 1097 141 HOH HOH . D 3 HOH A 98 1098 142 HOH HOH . D 3 HOH A 99 1099 144 HOH HOH . D 3 HOH A 100 1100 146 HOH HOH . D 3 HOH A 101 1101 147 HOH HOH . D 3 HOH A 102 1102 148 HOH HOH . D 3 HOH A 103 1103 149 HOH HOH . D 3 HOH A 104 1104 150 HOH HOH . D 3 HOH A 105 1105 151 HOH HOH . D 3 HOH A 106 1106 152 HOH HOH . D 3 HOH A 107 1107 153 HOH HOH . D 3 HOH A 108 1108 154 HOH HOH . D 3 HOH A 109 1109 156 HOH HOH . D 3 HOH A 110 1110 157 HOH HOH . D 3 HOH A 111 1111 163 HOH HOH . D 3 HOH A 112 1112 164 HOH HOH . D 3 HOH A 113 1113 166 HOH HOH . D 3 HOH A 114 1114 168 HOH HOH . D 3 HOH A 115 1115 169 HOH HOH . D 3 HOH A 116 1116 181 HOH HOH . D 3 HOH A 117 1117 189 HOH HOH . D 3 HOH A 118 1118 238 HOH HOH . D 3 HOH A 119 1119 266 HOH HOH . D 3 HOH A 120 1120 267 HOH HOH . D 3 HOH A 121 1121 268 HOH HOH . D 3 HOH A 122 1122 269 HOH HOH . D 3 HOH A 123 1123 270 HOH HOH . D 3 HOH A 124 1124 271 HOH HOH . D 3 HOH A 125 1125 272 HOH HOH . D 3 HOH A 126 1126 273 HOH HOH . D 3 HOH A 127 1127 274 HOH HOH . D 3 HOH A 128 1128 275 HOH HOH . D 3 HOH A 129 1129 276 HOH HOH . D 3 HOH A 130 1130 277 HOH HOH . D 3 HOH A 131 1131 279 HOH HOH . D 3 HOH A 132 1132 280 HOH HOH . D 3 HOH A 133 1133 288 HOH HOH . D 3 HOH A 134 1134 289 HOH HOH . D 3 HOH A 135 1135 290 HOH HOH . D 3 HOH A 136 1136 291 HOH HOH . D 3 HOH A 137 1137 292 HOH HOH . D 3 HOH A 138 1138 293 HOH HOH . D 3 HOH A 139 1139 294 HOH HOH . D 3 HOH A 140 1140 296 HOH HOH . D 3 HOH A 141 1141 297 HOH HOH . D 3 HOH A 142 1142 298 HOH HOH . D 3 HOH A 143 1143 299 HOH HOH . D 3 HOH A 144 1144 300 HOH HOH . D 3 HOH A 145 1145 301 HOH HOH . D 3 HOH A 146 1146 302 HOH HOH . D 3 HOH A 147 1147 303 HOH HOH . D 3 HOH A 148 1148 304 HOH HOH . D 3 HOH A 149 1149 305 HOH HOH . D 3 HOH A 150 1150 306 HOH HOH . D 3 HOH A 151 1151 307 HOH HOH . D 3 HOH A 152 1152 308 HOH HOH . D 3 HOH A 153 1153 309 HOH HOH . D 3 HOH A 154 1154 310 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 -4.048 0.9 19.371 1 39.14 ? C1 GOL 902 A 1 HETATM 2 O O1 GOL . . . C 2 -5.384 1.354 19.638 1 35.33 ? O1 GOL 902 A 1 HETATM 3 C C2 GOL . . . C 2 -3.034 1.617 20.268 1 41.15 ? C2 GOL 902 A 1 HETATM 4 O O2 GOL . . . C 2 -2.047 2.24 19.443 1 47.77 ? O2 GOL 902 A 1 HETATM 5 C C3 GOL . . . C 2 -2.238 0.66 21.146 1 42.13 ? C3 GOL 902 A 1 HETATM 6 O O3 GOL . . . C 2 -2.901 0.287 22.359 1 47.43 ? O3 GOL 902 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #