data_4FVR
#
_model_server_result.job_id            zdvytbMefx5sh-Wlj_xvVA 
_model_server_result.datetime_utc      '2024-11-21 22:56:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4fvr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":901}' 
#
_entry.id    4FVR 
#
_exptl.entry_id    4FVR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.86 
_cell.angle_gamma         90 
_cell.entry_id            4FVR 
_cell.length_a            46.9 
_cell.length_b            57.326 
_cell.length_c            60.555 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4FVR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 143 A ASN 678 1_555 C MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc2 B O3G ATP . A ATP 901 1_555 C MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? 
metalc ? metalc3 B O2A ATP . A ATP 901 1_555 C MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? 
metalc ? metalc4 B O1B ATP . A ATP 901 1_555 C MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc5 C MG MG . A MG 902 1_555 D O HOH . A HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc6 C MG MG . A MG 902 1_555 D O HOH . A HOH 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     4FVR 
_atom_sites.fract_transf_matrix[1][1]    0.021322 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008554 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017444 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017793 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 901 1 ATP ATP . 
C 3 MG A 1 902 1 MG MG . 
D 4 HOH A 1 1001 1 HOH HOH . 
D 4 HOH A 2 1002 2 HOH HOH . 
D 4 HOH A 3 1003 3 HOH HOH . 
D 4 HOH A 4 1004 4 HOH HOH . 
D 4 HOH A 5 1005 5 HOH HOH . 
D 4 HOH A 6 1006 6 HOH HOH . 
D 4 HOH A 7 1007 7 HOH HOH . 
D 4 HOH A 8 1008 8 HOH HOH . 
D 4 HOH A 9 1009 9 HOH HOH . 
D 4 HOH A 10 1010 10 HOH HOH . 
D 4 HOH A 11 1011 11 HOH HOH . 
D 4 HOH A 12 1012 12 HOH HOH . 
D 4 HOH A 13 1013 13 HOH HOH . 
D 4 HOH A 14 1014 14 HOH HOH . 
D 4 HOH A 15 1015 15 HOH HOH . 
D 4 HOH A 16 1016 16 HOH HOH . 
D 4 HOH A 17 1017 17 HOH HOH . 
D 4 HOH A 18 1018 18 HOH HOH . 
D 4 HOH A 19 1019 19 HOH HOH . 
D 4 HOH A 20 1020 20 HOH HOH . 
D 4 HOH A 21 1021 21 HOH HOH . 
D 4 HOH A 22 1022 22 HOH HOH . 
D 4 HOH A 23 1023 23 HOH HOH . 
D 4 HOH A 24 1024 24 HOH HOH . 
D 4 HOH A 25 1025 25 HOH HOH . 
D 4 HOH A 26 1026 26 HOH HOH . 
D 4 HOH A 27 1027 27 HOH HOH . 
D 4 HOH A 28 1028 28 HOH HOH . 
D 4 HOH A 29 1029 29 HOH HOH . 
D 4 HOH A 30 1030 30 HOH HOH . 
D 4 HOH A 31 1031 31 HOH HOH . 
D 4 HOH A 32 1032 32 HOH HOH . 
D 4 HOH A 33 1033 33 HOH HOH . 
D 4 HOH A 34 1034 34 HOH HOH . 
D 4 HOH A 35 1035 35 HOH HOH . 
D 4 HOH A 36 1036 36 HOH HOH . 
D 4 HOH A 37 1037 37 HOH HOH . 
D 4 HOH A 38 1038 38 HOH HOH . 
D 4 HOH A 39 1039 39 HOH HOH . 
D 4 HOH A 40 1040 40 HOH HOH . 
D 4 HOH A 41 1041 41 HOH HOH . 
D 4 HOH A 42 1042 42 HOH HOH . 
D 4 HOH A 43 1043 43 HOH HOH . 
D 4 HOH A 44 1044 44 HOH HOH . 
D 4 HOH A 45 1045 45 HOH HOH . 
D 4 HOH A 46 1046 46 HOH HOH . 
D 4 HOH A 47 1047 47 HOH HOH . 
D 4 HOH A 48 1048 48 HOH HOH . 
D 4 HOH A 49 1049 49 HOH HOH . 
D 4 HOH A 50 1050 50 HOH HOH . 
D 4 HOH A 51 1051 51 HOH HOH . 
D 4 HOH A 52 1052 52 HOH HOH . 
D 4 HOH A 53 1053 53 HOH HOH . 
D 4 HOH A 54 1054 54 HOH HOH . 
D 4 HOH A 55 1055 55 HOH HOH . 
D 4 HOH A 56 1056 56 HOH HOH . 
D 4 HOH A 57 1057 57 HOH HOH . 
D 4 HOH A 58 1058 58 HOH HOH . 
D 4 HOH A 59 1059 59 HOH HOH . 
D 4 HOH A 60 1060 60 HOH HOH . 
D 4 HOH A 61 1061 61 HOH HOH . 
D 4 HOH A 62 1062 62 HOH HOH . 
D 4 HOH A 63 1063 63 HOH HOH . 
D 4 HOH A 64 1064 64 HOH HOH . 
D 4 HOH A 65 1065 65 HOH HOH . 
D 4 HOH A 66 1066 66 HOH HOH . 
D 4 HOH A 67 1067 67 HOH HOH . 
D 4 HOH A 68 1068 68 HOH HOH . 
D 4 HOH A 69 1069 69 HOH HOH . 
D 4 HOH A 70 1070 70 HOH HOH . 
D 4 HOH A 71 1071 71 HOH HOH . 
D 4 HOH A 72 1072 72 HOH HOH . 
D 4 HOH A 73 1073 73 HOH HOH . 
D 4 HOH A 74 1074 74 HOH HOH . 
D 4 HOH A 75 1075 75 HOH HOH . 
D 4 HOH A 76 1076 76 HOH HOH . 
D 4 HOH A 77 1077 77 HOH HOH . 
D 4 HOH A 78 1078 78 HOH HOH . 
D 4 HOH A 79 1079 79 HOH HOH . 
D 4 HOH A 80 1080 80 HOH HOH . 
D 4 HOH A 81 1081 81 HOH HOH . 
D 4 HOH A 82 1082 82 HOH HOH . 
D 4 HOH A 83 1083 83 HOH HOH . 
D 4 HOH A 84 1084 84 HOH HOH . 
D 4 HOH A 85 1085 85 HOH HOH . 
D 4 HOH A 86 1086 86 HOH HOH . 
D 4 HOH A 87 1087 87 HOH HOH . 
D 4 HOH A 88 1088 88 HOH HOH . 
D 4 HOH A 89 1089 89 HOH HOH . 
D 4 HOH A 90 1090 90 HOH HOH . 
D 4 HOH A 91 1091 91 HOH HOH . 
D 4 HOH A 92 1092 92 HOH HOH . 
D 4 HOH A 93 1093 93 HOH HOH . 
D 4 HOH A 94 1094 94 HOH HOH . 
D 4 HOH A 95 1095 95 HOH HOH . 
D 4 HOH A 96 1096 96 HOH HOH . 
D 4 HOH A 97 1097 97 HOH HOH . 
D 4 HOH A 98 1098 98 HOH HOH . 
D 4 HOH A 99 1099 99 HOH HOH . 
D 4 HOH A 100 1100 100 HOH HOH . 
D 4 HOH A 101 1101 101 HOH HOH . 
D 4 HOH A 102 1102 102 HOH HOH . 
D 4 HOH A 103 1103 103 HOH HOH . 
D 4 HOH A 104 1104 104 HOH HOH . 
D 4 HOH A 105 1105 105 HOH HOH . 
D 4 HOH A 106 1106 106 HOH HOH . 
D 4 HOH A 107 1107 107 HOH HOH . 
D 4 HOH A 108 1108 108 HOH HOH . 
D 4 HOH A 109 1109 109 HOH HOH . 
D 4 HOH A 110 1110 110 HOH HOH . 
D 4 HOH A 111 1111 111 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . B 2 2.483 -7.872 21.746 1 31.09 ? PG ATP 901 A 1 
HETATM 2 O O1G ATP . . . B 2 2.634 -6.493 22.362 1 34 ? O1G ATP 901 A 1 
HETATM 3 O O2G ATP . . . B 2 1.062 -8.343 21.647 1 32.3 ? O2G ATP 901 A 1 
HETATM 4 O O3G ATP . . . B 2 3.325 -8.071 20.495 1 38.58 ? O3G ATP 901 A 1 
HETATM 5 P PB ATP . . . B 2 3.759 -10.284 22.746 1 27.72 ? PB ATP 901 A 1 
HETATM 6 O O1B ATP . . . B 2 3.598 -10.773 21.331 1 23.4 ? O1B ATP 901 A 1 
HETATM 7 O O2B ATP . . . B 2 3.06 -11.128 23.798 1 32.02 ? O2B ATP 901 A 1 
HETATM 8 O O3B ATP . . . B 2 3.259 -8.762 22.851 1 29.08 ? O3B ATP 901 A 1 
HETATM 9 P PA ATP . . . B 2 6.351 -9.404 22.253 1 31.13 ? PA ATP 901 A 1 
HETATM 10 O O1A ATP . . . B 2 6.715 -8.135 22.973 1 35.23 ? O1A ATP 901 A 1 
HETATM 11 O O2A ATP . . . B 2 5.823 -9.332 20.842 1 28.37 ? O2A ATP 901 A 1 
HETATM 12 O O3A ATP . . . B 2 5.312 -10.214 23.158 1 31.18 ? O3A ATP 901 A 1 
HETATM 13 O O5' ATP . . . B 2 7.693 -10.3 22.294 1 30.36 ? O5' ATP 901 A 1 
HETATM 14 C C5' ATP . . . B 2 8.51 -10.316 23.458 1 30.61 ? C5' ATP 901 A 1 
HETATM 15 C C4' ATP . . . B 2 9.869 -10.952 23.183 1 31.97 ? C4' ATP 901 A 1 
HETATM 16 O O4' ATP . . . B 2 9.692 -12.274 22.678 1 31.62 ? O4' ATP 901 A 1 
HETATM 17 C C3' ATP . . . B 2 10.7 -10.207 22.139 1 32.2 ? C3' ATP 901 A 1 
HETATM 18 O O3' ATP . . . B 2 12.094 -10.305 22.513 1 38.4 ? O3' ATP 901 A 1 
HETATM 19 C C2' ATP . . . B 2 10.5 -10.987 20.868 1 31.25 ? C2' ATP 901 A 1 
HETATM 20 O O2' ATP . . . B 2 11.656 -10.921 20.031 1 36.98 ? O2' ATP 901 A 1 
HETATM 21 C C1' ATP . . . B 2 10.355 -12.395 21.414 1 30.53 ? C1' ATP 901 A 1 
HETATM 22 N N9 ATP . . . B 2 9.533 -13.281 20.57 1 28.78 ? N9 ATP 901 A 1 
HETATM 23 C C8 ATP . . . B 2 8.2 -13.165 20.41 1 26.1 ? C8 ATP 901 A 1 
HETATM 24 N N7 ATP . . . B 2 7.754 -14.164 19.623 1 28.58 ? N7 ATP 901 A 1 
HETATM 25 C C5 ATP . . . B 2 8.831 -14.917 19.276 1 26.14 ? C5 ATP 901 A 1 
HETATM 26 C C6 ATP . . . B 2 9.042 -16.131 18.46 1 24.65 ? C6 ATP 901 A 1 
HETATM 27 N N6 ATP . . . B 2 7.948 -16.698 17.893 1 22.36 ? N6 ATP 901 A 1 
HETATM 28 N N1 ATP . . . B 2 10.308 -16.616 18.346 1 25.94 ? N1 ATP 901 A 1 
HETATM 29 C C2 ATP . . . B 2 11.367 -16.02 18.958 1 25.43 ? C2 ATP 901 A 1 
HETATM 30 N N3 ATP . . . B 2 11.244 -14.905 19.704 1 27.24 ? N3 ATP 901 A 1 
HETATM 31 C C4 ATP . . . B 2 10.009 -14.346 19.914 1 26.19 ? C4 ATP 901 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#