data_4FWN # _model_server_result.job_id memrmdUderQ9ZkmXj2679A _model_server_result.datetime_utc '2024-11-23 02:08:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fwn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 4FWN # _exptl.entry_id 4FWN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 587.161 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TETRAPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FWN _cell.length_a 110.369 _cell.length_b 110.369 _cell.length_c 66.675 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FWN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 22.225 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N5 O16 P4' _chem_comp.formula_weight 587.161 _chem_comp.id AQP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TETRAPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N6 C6 AQP sing 13 n n N6 HN61 AQP sing 14 n n N6 HN62 AQP sing 15 n n C6 N1 AQP doub 16 n y C6 C5 AQP sing 17 n y N1 C2 AQP sing 18 n y C2 N3 AQP doub 19 n y C2 H2 AQP sing 20 n n N3 C4 AQP sing 21 n y C4 N9 AQP sing 22 n y C4 C5 AQP doub 23 n y N9 C8 AQP sing 24 n y N9 C1' AQP sing 25 n n C8 N7 AQP doub 26 n y C8 H8 AQP sing 27 n n N7 C5 AQP sing 28 n y C1' O4' AQP sing 29 n n C1' C2' AQP sing 30 n n C1' H1' AQP sing 31 n n O4' C4' AQP sing 32 n n C4' C5' AQP sing 33 n n C4' C3' AQP sing 34 n n C4' H4' AQP sing 35 n n C5' O5' AQP sing 36 n n C5' "H5'1" AQP sing 37 n n C5' "H5'2" AQP sing 38 n n O5' PA AQP sing 39 n n PA O1A AQP sing 40 n n PA O2A AQP doub 41 n n PA O3A AQP sing 42 n n O1A H1A AQP sing 43 n n O3A PB AQP sing 44 n n PB O2B AQP sing 45 n n PB O1B AQP doub 46 n n PB O3B AQP sing 47 n n O2B H2B AQP sing 48 n n O3B PG AQP sing 49 n n PG O2G AQP sing 50 n n PG O1G AQP doub 51 n n PG O3G AQP sing 52 n n O2G H2G AQP sing 53 n n O3G PD AQP sing 54 n n PD O2D AQP sing 55 n n PD O1D AQP sing 56 n n PD O3D AQP doub 57 n n O2D H2D AQP sing 58 n n O1D H1D AQP sing 59 n n C3' O3' AQP sing 60 n n C3' C2' AQP sing 61 n n C3' H3' AQP sing 62 n n O3' H1 AQP sing 63 n n C2' O2' AQP sing 64 n n C2' H2' AQP sing 65 n n O2' H3 AQP sing 66 n n # _atom_sites.entry_id 4FWN _atom_sites.fract_transf_matrix[1][1] 0.009061 _atom_sites.fract_transf_matrix[1][2] 0.005231 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010462 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014998 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 501 401 EDO EDO . C 2 EDO A 1 502 402 EDO EDO . D 3 AQP A 1 503 501 AQP AQP . E 4 HOH A 1 601 1 HOH HOH . E 4 HOH A 2 602 2 HOH HOH . E 4 HOH A 3 603 3 HOH HOH . E 4 HOH A 4 604 4 HOH HOH . E 4 HOH A 5 605 5 HOH HOH . E 4 HOH A 6 606 6 HOH HOH . E 4 HOH A 7 607 7 HOH HOH . E 4 HOH A 8 608 8 HOH HOH . E 4 HOH A 9 609 9 HOH HOH . E 4 HOH A 10 610 10 HOH HOH . E 4 HOH A 11 611 11 HOH HOH . E 4 HOH A 12 612 12 HOH HOH . E 4 HOH A 13 613 13 HOH HOH . E 4 HOH A 14 614 14 HOH HOH . E 4 HOH A 15 615 15 HOH HOH . E 4 HOH A 16 616 16 HOH HOH . E 4 HOH A 17 617 17 HOH HOH . E 4 HOH A 18 618 18 HOH HOH . E 4 HOH A 19 619 19 HOH HOH . E 4 HOH A 20 620 20 HOH HOH . E 4 HOH A 21 621 21 HOH HOH . E 4 HOH A 22 622 22 HOH HOH . E 4 HOH A 23 623 23 HOH HOH . E 4 HOH A 24 624 24 HOH HOH . E 4 HOH A 25 625 25 HOH HOH . E 4 HOH A 26 626 26 HOH HOH . E 4 HOH A 27 627 27 HOH HOH . E 4 HOH A 28 628 28 HOH HOH . E 4 HOH A 29 629 29 HOH HOH . E 4 HOH A 30 630 30 HOH HOH . E 4 HOH A 31 631 31 HOH HOH . E 4 HOH A 32 632 32 HOH HOH . E 4 HOH A 33 633 33 HOH HOH . E 4 HOH A 34 634 34 HOH HOH . E 4 HOH A 35 635 35 HOH HOH . E 4 HOH A 36 636 36 HOH HOH . E 4 HOH A 37 637 37 HOH HOH . E 4 HOH A 38 638 38 HOH HOH . E 4 HOH A 39 639 39 HOH HOH . E 4 HOH A 40 640 40 HOH HOH . E 4 HOH A 41 641 41 HOH HOH . E 4 HOH A 42 642 42 HOH HOH . E 4 HOH A 43 643 43 HOH HOH . E 4 HOH A 44 644 44 HOH HOH . E 4 HOH A 45 645 45 HOH HOH . E 4 HOH A 46 646 46 HOH HOH . E 4 HOH A 47 647 47 HOH HOH . E 4 HOH A 48 648 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N6 AQP . . . D 3 24.626 -45.379 -16.322 1 59.36 ? N6 AQP 503 A 1 HETATM 2 C C6 AQP . . . D 3 24.608 -44.571 -15.233 1 59.31 ? C6 AQP 503 A 1 HETATM 3 N N1 AQP . . . D 3 25.745 -44.28 -14.552 1 59.12 ? N1 AQP 503 A 1 HETATM 4 C C2 AQP . . . D 3 25.733 -43.477 -13.468 1 58.94 ? C2 AQP 503 A 1 HETATM 5 N N3 AQP . . . D 3 24.616 -42.907 -12.972 1 58.88 ? N3 AQP 503 A 1 HETATM 6 C C4 AQP . . . D 3 23.407 -43.115 -13.553 1 59.03 ? C4 AQP 503 A 1 HETATM 7 N N9 AQP . . . D 3 22.157 -42.708 -13.311 1 59.05 ? N9 AQP 503 A 1 HETATM 8 C C8 AQP . . . D 3 21.344 -43.245 -14.242 1 59.11 ? C8 AQP 503 A 1 HETATM 9 N N7 AQP . . . D 3 22.043 -44.015 -15.116 1 59.15 ? N7 AQP 503 A 1 HETATM 10 C C5 AQP . . . D 3 23.335 -43.977 -14.746 1 59.15 ? C5 AQP 503 A 1 HETATM 11 C C1' AQP . . . D 3 21.75 -41.811 -12.201 1 58.97 ? C1' AQP 503 A 1 HETATM 12 O O4' AQP . . . D 3 20.566 -42.273 -11.552 1 59 ? O4' AQP 503 A 1 HETATM 13 C C4' AQP . . . D 3 19.838 -41.149 -11.04 1 58.94 ? C4' AQP 503 A 1 HETATM 14 C C5' AQP . . . D 3 18.343 -41.328 -11.269 1 58.61 ? C5' AQP 503 A 1 HETATM 15 O O5' AQP . . . D 3 17.913 -42.519 -10.61 1 58.02 ? O5' AQP 503 A 1 HETATM 16 P PA AQP . . . D 3 16.39 -43.021 -10.734 1 57.68 ? PA AQP 503 A 1 HETATM 17 O O1A AQP . . . D 3 16.198 -44.178 -9.783 1 57.46 ? O1A AQP 503 A 1 HETATM 18 O O2A AQP . . . D 3 16.08 -43.201 -12.202 1 57.63 ? O2A AQP 503 A 1 HETATM 19 O O3A AQP . . . D 3 15.586 -41.737 -10.176 1 57.94 ? O3A AQP 503 A 1 HETATM 20 P PB AQP . . . D 3 13.981 -41.712 -10.027 1 58.2 ? PB AQP 503 A 1 HETATM 21 O O2B AQP . . . D 3 13.592 -40.352 -9.494 1 57.9 ? O2B AQP 503 A 1 HETATM 22 O O1B AQP . . . D 3 13.37 -42.205 -11.32 1 57.89 ? O1B AQP 503 A 1 HETATM 23 O O3B AQP . . . D 3 13.716 -42.822 -8.883 1 58.33 ? O3B AQP 503 A 1 HETATM 24 P PG AQP . . . D 3 13.782 -42.471 -7.309 1 58.49 ? PG AQP 503 A 1 HETATM 25 O O2G AQP . . . D 3 13.802 -43.776 -6.55 1 58.41 ? O2G AQP 503 A 1 HETATM 26 O O1G AQP . . . D 3 14.884 -41.462 -7.084 1 58.12 ? O1G AQP 503 A 1 HETATM 27 O O3G AQP . . . D 3 12.352 -41.761 -7.062 1 58.78 ? O3G AQP 503 A 1 HETATM 28 P PD AQP . . . D 3 12.022 -40.86 -5.763 1 59.24 ? PD AQP 503 A 1 HETATM 29 O O2D AQP . . . D 3 13.01 -41.304 -4.714 1 59.44 ? O2D AQP 503 A 1 HETATM 30 O O1D AQP . . . D 3 12.226 -39.434 -6.222 1 59.25 ? O1D AQP 503 A 1 HETATM 31 O O3D AQP . . . D 3 10.589 -41.205 -5.436 1 59.3 ? O3D AQP 503 A 1 HETATM 32 C C3' AQP . . . D 3 20.369 -39.907 -11.739 1 58.93 ? C3' AQP 503 A 1 HETATM 33 O O3' AQP . . . D 3 20.957 -39.04 -10.762 1 58.85 ? O3' AQP 503 A 1 HETATM 34 C C2' AQP . . . D 3 21.411 -40.422 -12.717 1 59.02 ? C2' AQP 503 A 1 HETATM 35 O O2' AQP . . . D 3 22.581 -39.6 -12.759 1 59.36 ? O2' AQP 503 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #