data_4FWX # _model_server_result.job_id 0GXVi-3FlFwwCRPhJKVvMQ _model_server_result.datetime_utc '2025-08-31 04:07:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fwx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4FWX # _exptl.entry_id 4FWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FWX _cell.length_a 39.219 _cell.length_b 47.718 _cell.length_c 77.089 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 C O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 116 n n CHA C4D HEM doub 117 n n CHA HHA HEM sing 118 n n CHB C4A HEM sing 119 n n CHB C1B HEM doub 120 n n CHB HHB HEM sing 121 n n CHC C4B HEM sing 122 n n CHC C1C HEM doub 123 n n CHC HHC HEM sing 124 n n CHD C4C HEM doub 125 n n CHD C1D HEM sing 126 n n CHD HHD HEM sing 127 n n C1A C2A HEM doub 128 n y C1A NA HEM sing 129 n y C2A C3A HEM sing 130 n y C2A CAA HEM sing 131 n n C3A C4A HEM doub 132 n y C3A CMA HEM sing 133 n n C4A NA HEM sing 134 n y CMA HMA HEM sing 135 n n CMA HMAA HEM sing 136 n n CMA HMAB HEM sing 137 n n CAA CBA HEM sing 138 n n CAA HAA HEM sing 139 n n CAA HAAA HEM sing 140 n n CBA CGA HEM sing 141 n n CBA HBA HEM sing 142 n n CBA HBAA HEM sing 143 n n CGA O1A HEM doub 144 n n CGA O2A HEM sing 145 n n C1B C2B HEM sing 146 n n C1B NB HEM sing 147 n n C2B C3B HEM doub 148 n n C2B CMB HEM sing 149 n n C3B C4B HEM sing 150 n n C3B CAB HEM sing 151 n n C4B NB HEM doub 152 n n CMB HMB HEM sing 153 n n CMB HMBA HEM sing 154 n n CMB HMBB HEM sing 155 n n CAB CBB HEM doub 156 n n CAB HAB HEM sing 157 n n CBB HBB HEM sing 158 n n CBB HBBA HEM sing 159 n n C1C C2C HEM sing 160 n y C1C NC HEM sing 161 n y C2C C3C HEM doub 162 n y C2C CMC HEM sing 163 n n C3C C4C HEM sing 164 n y C3C CAC HEM sing 165 n n C4C NC HEM sing 166 n y CMC HMC HEM sing 167 n n CMC HMCA HEM sing 168 n n CMC HMCB HEM sing 169 n n CAC CBC HEM doub 170 n n CAC HAC HEM sing 171 n n CBC HBC HEM sing 172 n n CBC HBCA HEM sing 173 n n C1D C2D HEM sing 174 n n C1D ND HEM doub 175 n n C2D C3D HEM doub 176 n n C2D CMD HEM sing 177 n n C3D C4D HEM sing 178 n n C3D CAD HEM sing 179 n n C4D ND HEM sing 180 n n CMD HMD HEM sing 181 n n CMD HMDA HEM sing 182 n n CMD HMDB HEM sing 183 n n CAD CBD HEM sing 184 n n CAD HAD HEM sing 185 n n CAD HADA HEM sing 186 n n CBD CGD HEM sing 187 n n CBD HBD HEM sing 188 n n CBD HBDA HEM sing 189 n n CGD O1D HEM doub 190 n n CGD O2D HEM sing 191 n n O2A H2A HEM sing 192 n n O2D H2D HEM sing 193 n n FE NA HEM sing 194 n n FE NB HEM sing 195 n n FE NC HEM sing 196 n n FE ND HEM sing 197 n n # _atom_sites.entry_id 4FWX _atom_sites.fract_transf_matrix[1][1] 0.025498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020956 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012972 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 155 HEM HEM . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 -6.055 9.281 -9.393 1 22.97 ? CHA HEM 201 A 1 HETATM 2 C CHB HEM . . . B 2 -4.781 6.932 -5.239 1 18.76 ? CHB HEM 201 A 1 HETATM 3 C CHC HEM . . . B 2 -4.876 2.694 -7.669 1 20.66 ? CHC HEM 201 A 1 HETATM 4 C CHD HEM . . . B 2 -6.25 5.102 -11.838 1 22.03 ? CHD HEM 201 A 1 HETATM 5 C C1A HEM . . . B 2 -5.711 8.954 -8.047 1 19.88 ? C1A HEM 201 A 1 HETATM 6 C C2A HEM . . . B 2 -5.617 10.003 -7.038 1 22.7 ? C2A HEM 201 A 1 HETATM 7 C C3A HEM . . . B 2 -5.23 9.33 -5.789 1 21.77 ? C3A HEM 201 A 1 HETATM 8 C C4A HEM . . . B 2 -5.111 7.92 -6.215 1 23.09 ? C4A HEM 201 A 1 HETATM 9 C CMA HEM . . . B 2 -5.023 9.984 -4.43 1 21.34 ? CMA HEM 201 A 1 HETATM 10 C CAA HEM . . . B 2 -5.868 11.483 -7.21 1 22.62 ? CAA HEM 201 A 1 HETATM 11 C CBA HEM . . . B 2 -7.258 11.808 -6.66 1 26.84 ? CBA HEM 201 A 1 HETATM 12 C CGA HEM . . . B 2 -8.318 10.815 -7.142 1 26.74 ? CGA HEM 201 A 1 HETATM 13 O O1A HEM . . . B 2 -8.659 9.873 -6.363 1 24.33 ? O1A HEM 201 A 1 HETATM 14 O O2A HEM . . . B 2 -8.823 10.943 -8.277 1 24.48 ? O2A HEM 201 A 1 HETATM 15 C C1B HEM . . . B 2 -4.705 5.515 -5.539 1 21.43 ? C1B HEM 201 A 1 HETATM 16 C C2B HEM . . . B 2 -4.239 4.574 -4.501 1 18.58 ? C2B HEM 201 A 1 HETATM 17 C C3B HEM . . . B 2 -4.268 3.344 -5.233 1 19.66 ? C3B HEM 201 A 1 HETATM 18 C C4B HEM . . . B 2 -4.701 3.697 -6.595 1 20.56 ? C4B HEM 201 A 1 HETATM 19 C CMB HEM . . . B 2 -3.92 4.969 -3.073 1 17.95 ? CMB HEM 201 A 1 HETATM 20 C CAB HEM . . . B 2 -3.942 1.977 -4.777 1 19.22 ? CAB HEM 201 A 1 HETATM 21 C CBB HEM . . . B 2 -2.927 1.847 -3.926 1 22.22 ? CBB HEM 201 A 1 HETATM 22 C C1C HEM . . . B 2 -5.166 2.97 -9.085 1 21.06 ? C1C HEM 201 A 1 HETATM 23 C C2C HEM . . . B 2 -5.079 1.936 -10.172 1 21.89 ? C2C HEM 201 A 1 HETATM 24 C C3C HEM . . . B 2 -5.488 2.655 -11.383 1 22.4 ? C3C HEM 201 A 1 HETATM 25 C C4C HEM . . . B 2 -5.744 4.041 -10.972 1 22.53 ? C4C HEM 201 A 1 HETATM 26 C CMC HEM . . . B 2 -4.68 0.522 -9.959 1 23.36 ? CMC HEM 201 A 1 HETATM 27 C CAC HEM . . . B 2 -5.559 2.172 -12.786 1 23.07 ? CAC HEM 201 A 1 HETATM 28 C CBC HEM . . . B 2 -5.29 0.919 -13.119 1 27.76 ? CBC HEM 201 A 1 HETATM 29 C C1D HEM . . . B 2 -6.35 6.478 -11.421 1 25.17 ? C1D HEM 201 A 1 HETATM 30 C C2D HEM . . . B 2 -6.654 7.475 -12.464 1 26.22 ? C2D HEM 201 A 1 HETATM 31 C C3D HEM . . . B 2 -6.604 8.712 -11.736 1 28.3 ? C3D HEM 201 A 1 HETATM 32 C C4D HEM . . . B 2 -6.235 8.272 -10.399 1 25.16 ? C4D HEM 201 A 1 HETATM 33 C CMD HEM . . . B 2 -6.968 7.178 -13.921 1 30.53 ? CMD HEM 201 A 1 HETATM 34 C CAD HEM . . . B 2 -6.783 10.151 -12.146 1 30.92 ? CAD HEM 201 A 1 HETATM 35 C CBD HEM . . . B 2 -5.404 10.534 -12.68 1 33.42 ? CBD HEM 201 A 1 HETATM 36 C CGD HEM . . . B 2 -5.702 11.69 -13.564 1 42.6 ? CGD HEM 201 A 1 HETATM 37 O O1D HEM . . . B 2 -6.274 11.398 -14.628 1 51.26 ? O1D HEM 201 A 1 HETATM 38 O O2D HEM . . . B 2 -5.422 12.847 -13.206 1 47.25 ? O2D HEM 201 A 1 HETATM 39 N NA HEM . . . B 2 -5.316 7.663 -7.636 1 23.64 ? NA HEM 201 A 1 HETATM 40 N NB HEM . . . B 2 -4.9 5.011 -6.775 1 23.47 ? NB HEM 201 A 1 HETATM 41 N NC HEM . . . B 2 -5.524 4.247 -9.557 1 21.8 ? NC HEM 201 A 1 HETATM 42 N ND HEM . . . B 2 -6.073 6.958 -10.212 1 24.84 ? ND HEM 201 A 1 HETATM 43 FE FE HEM . . . B 2 -5.665 5.911 -8.485 1 24.5 ? FE HEM 201 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 65 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 43 #