data_4FXJ # _model_server_result.job_id waWOPGy5JGicBg1-tZqLmA _model_server_result.datetime_utc '2024-12-12 08:01:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fxj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":602}' # _entry.id 4FXJ # _exptl.entry_id 4FXJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.189 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLALANINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.72 _cell.angle_gamma 90 _cell.entry_id 4FXJ _cell.length_a 97.26 _cell.length_b 70.6 _cell.length_c 167.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FXJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 I N N ? 3 K N N ? 3 M N N # _chem_comp.formula 'C9 H11 N O2' _chem_comp.formula_weight 165.189 _chem_comp.id PHE _chem_comp.mon_nstd_flag y _chem_comp.name PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PHE sing 237 n n N H PHE sing 238 n n N H2 PHE sing 239 n n CA C PHE sing 240 n n CA CB PHE sing 241 n n CA HA PHE sing 242 n n C O PHE doub 243 n n C OXT PHE sing 244 n n CB CG PHE sing 245 n n CB HB2 PHE sing 246 n n CB HB3 PHE sing 247 n n CG CD1 PHE doub 248 n y CG CD2 PHE sing 249 n y CD1 CE1 PHE sing 250 n y CD1 HD1 PHE sing 251 n n CD2 CE2 PHE doub 252 n y CD2 HD2 PHE sing 253 n n CE1 CZ PHE doub 254 n y CE1 HE1 PHE sing 255 n n CE2 CZ PHE sing 256 n y CE2 HE2 PHE sing 257 n n CZ HZ PHE sing 258 n n OXT HXT PHE sing 259 n n # _atom_sites.entry_id 4FXJ _atom_sites.fract_transf_matrix[1][1] 0.010282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002894 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006198 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 601 3 PO4 PO4 . F 2 PO4 A 1 602 5 PO4 PO4 . G 3 PHE A 1 603 2 PHE PHE . H 2 PO4 B 1 601 4 PO4 PO4 . I 3 PHE B 1 602 1 PHE PHE . J 2 PO4 C 1 601 1 PO4 PO4 . K 3 PHE C 1 602 3 PHE PHE . L 2 PO4 D 1 601 2 PO4 PO4 . M 3 PHE D 1 602 4 PHE PHE . N 4 HOH A 1 701 5 HOH HOH . N 4 HOH A 2 702 10 HOH HOH . N 4 HOH A 3 703 16 HOH HOH . N 4 HOH A 4 704 20 HOH HOH . N 4 HOH A 5 705 21 HOH HOH . N 4 HOH A 6 706 22 HOH HOH . N 4 HOH A 7 707 23 HOH HOH . N 4 HOH A 8 708 25 HOH HOH . N 4 HOH A 9 709 30 HOH HOH . N 4 HOH A 10 710 32 HOH HOH . N 4 HOH A 11 711 33 HOH HOH . N 4 HOH A 12 712 36 HOH HOH . N 4 HOH A 13 713 40 HOH HOH . N 4 HOH A 14 714 43 HOH HOH . N 4 HOH A 15 715 47 HOH HOH . N 4 HOH A 16 716 52 HOH HOH . N 4 HOH A 17 717 53 HOH HOH . N 4 HOH A 18 718 54 HOH HOH . N 4 HOH A 19 719 61 HOH HOH . N 4 HOH A 20 720 75 HOH HOH . N 4 HOH A 21 721 82 HOH HOH . N 4 HOH A 22 722 84 HOH HOH . N 4 HOH A 23 723 89 HOH HOH . N 4 HOH A 24 724 94 HOH HOH . N 4 HOH A 25 725 100 HOH HOH . N 4 HOH A 26 726 101 HOH HOH . N 4 HOH A 27 727 102 HOH HOH . N 4 HOH A 28 728 105 HOH HOH . N 4 HOH A 29 729 111 HOH HOH . N 4 HOH A 30 730 129 HOH HOH . N 4 HOH A 31 731 138 HOH HOH . N 4 HOH A 32 732 165 HOH HOH . N 4 HOH A 33 733 166 HOH HOH . N 4 HOH A 34 734 199 HOH HOH . N 4 HOH A 35 735 226 HOH HOH . O 4 HOH B 1 701 6 HOH HOH . O 4 HOH B 2 702 13 HOH HOH . O 4 HOH B 3 703 28 HOH HOH . O 4 HOH B 4 704 29 HOH HOH . O 4 HOH B 5 705 34 HOH HOH . O 4 HOH B 6 706 37 HOH HOH . O 4 HOH B 7 707 39 HOH HOH . O 4 HOH B 8 708 49 HOH HOH . O 4 HOH B 9 709 58 HOH HOH . O 4 HOH B 10 710 59 HOH HOH . O 4 HOH B 11 711 70 HOH HOH . O 4 HOH B 12 712 72 HOH HOH . O 4 HOH B 13 713 78 HOH HOH . O 4 HOH B 14 714 79 HOH HOH . O 4 HOH B 15 715 83 HOH HOH . O 4 HOH B 16 716 91 HOH HOH . O 4 HOH B 17 717 93 HOH HOH . O 4 HOH B 18 718 112 HOH HOH . O 4 HOH B 19 719 113 HOH HOH . O 4 HOH B 20 720 127 HOH HOH . O 4 HOH B 21 721 128 HOH HOH . O 4 HOH B 22 722 133 HOH HOH . O 4 HOH B 23 723 136 HOH HOH . O 4 HOH B 24 724 142 HOH HOH . O 4 HOH B 25 725 157 HOH HOH . O 4 HOH B 26 726 176 HOH HOH . P 4 HOH C 1 701 14 HOH HOH . P 4 HOH C 2 702 17 HOH HOH . P 4 HOH C 3 703 24 HOH HOH . P 4 HOH C 4 704 26 HOH HOH . P 4 HOH C 5 705 35 HOH HOH . P 4 HOH C 6 706 38 HOH HOH . P 4 HOH C 7 707 42 HOH HOH . P 4 HOH C 8 708 44 HOH HOH . P 4 HOH C 9 709 51 HOH HOH . P 4 HOH C 10 710 60 HOH HOH . P 4 HOH C 11 711 85 HOH HOH . P 4 HOH C 12 712 92 HOH HOH . P 4 HOH C 13 713 131 HOH HOH . P 4 HOH C 14 714 161 HOH HOH . P 4 HOH C 15 715 204 HOH HOH . P 4 HOH C 16 716 227 HOH HOH . Q 4 HOH D 1 701 1 HOH HOH . Q 4 HOH D 2 702 3 HOH HOH . Q 4 HOH D 3 703 4 HOH HOH . Q 4 HOH D 4 704 7 HOH HOH . Q 4 HOH D 5 705 8 HOH HOH . Q 4 HOH D 6 706 12 HOH HOH . Q 4 HOH D 7 707 15 HOH HOH . Q 4 HOH D 8 708 27 HOH HOH . Q 4 HOH D 9 709 31 HOH HOH . Q 4 HOH D 10 710 46 HOH HOH . Q 4 HOH D 11 711 48 HOH HOH . Q 4 HOH D 12 712 55 HOH HOH . Q 4 HOH D 13 713 57 HOH HOH . Q 4 HOH D 14 714 80 HOH HOH . Q 4 HOH D 15 715 81 HOH HOH . Q 4 HOH D 16 716 96 HOH HOH . Q 4 HOH D 17 717 99 HOH HOH . Q 4 HOH D 18 718 107 HOH HOH . Q 4 HOH D 19 719 114 HOH HOH . Q 4 HOH D 20 720 117 HOH HOH . Q 4 HOH D 21 721 146 HOH HOH . Q 4 HOH D 22 722 152 HOH HOH . Q 4 HOH D 23 723 178 HOH HOH . Q 4 HOH D 24 724 182 HOH HOH . Q 4 HOH D 25 725 216 HOH HOH . Q 4 HOH D 26 726 239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PHE . . . M 3 6.141 -12.473 71.728 1 104.5 ? N PHE 602 D 1 HETATM 2 C CA PHE . . . M 3 7.605 -12.41 72.009 1 104.5 ? CA PHE 602 D 1 HETATM 3 C C PHE . . . M 3 7.898 -11.781 73.373 1 104.51 ? C PHE 602 D 1 HETATM 4 O O PHE . . . M 3 9.052 -11.674 73.793 1 104.51 ? O PHE 602 D 1 HETATM 5 C CB PHE . . . M 3 8.346 -11.665 70.887 1 104.49 ? CB PHE 602 D 1 HETATM 6 C CG PHE . . . M 3 7.904 -10.236 70.697 1 104.45 ? CG PHE 602 D 1 HETATM 7 C CD1 PHE . . . M 3 8.533 -9.201 71.383 1 104.42 ? CD1 PHE 602 D 1 HETATM 8 C CD2 PHE . . . M 3 6.872 -9.923 69.817 1 104.4 ? CD2 PHE 602 D 1 HETATM 9 C CE1 PHE . . . M 3 8.135 -7.878 71.206 1 104.4 ? CE1 PHE 602 D 1 HETATM 10 C CE2 PHE . . . M 3 6.466 -8.603 69.635 1 104.38 ? CE2 PHE 602 D 1 HETATM 11 C CZ PHE . . . M 3 7.099 -7.58 70.33 1 104.39 ? CZ PHE 602 D 1 HETATM 12 O OXT PHE . . . M 3 6.989 -11.368 74.094 1 104.51 ? OXT PHE 602 D 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 12 #