data_4FXS
#
_model_server_result.job_id            em2Cci-RWpvaVSpuzEqPPg 
_model_server_result.datetime_utc      '2024-11-25 22:02:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4fxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    4FXS 
#
_exptl.entry_id    4FXS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              348.206 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSINIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4FXS 
_cell.length_a            111.96 
_cell.length_b            111.96 
_cell.length_c            188.994 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4FXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 3 A MSE 3 1_555 A N LEU 4 A LEU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale2 A C PRO 45 A PRO 45 1_555 A N MSE 46 A MSE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale3 A C MSE 46 A MSE 46 1_555 A N VAL 47 A VAL 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale4 A C SER 50 A SER 50 1_555 A N MSE 51 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 A C MSE 51 A MSE 51 1_555 A N ASP 52 A ASP 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale6 A C ASN 75 A ASN 75 1_555 A N MSE 76 A MSE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale7 A C MSE 76 A MSE 76 1_555 A N SER 77 A SER 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale8 A C VAL 111 A VAL 111 1_555 A N MSE 112 A MSE 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale9 A C MSE 112 A MSE 112 1_555 A N GLU 113 A GLU 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale10 A C VAL 154 A VAL 154 1_555 A N MSE 155 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale11 A C MSE 155 A MSE 155 1_555 A N THR 156 A THR 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale12 A C LYS 176 A LYS 176 1_555 A N MSE 177 A MSE 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale13 A C MSE 177 A MSE 177 1_555 A N HIS 178 A HIS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale14 A C GLY 196 A GLY 196 1_555 A N MSE 197 A MSE 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale15 A C MSE 197 A MSE 197 1_555 A N ILE 198 A ILE 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale16 A C VAL 360 A VAL 360 1_555 A N MSE 361 A MSE 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
covale ? covale17 A C MSE 361 A MSE 361 1_555 A N VAL 362 A VAL 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale18 A C SER 364 A SER 364 1_555 A N MSE 365 A MSE 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale19 A C MSE 365 A MSE 365 1_555 A N PHE 366 A PHE 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 A C GLY 389 A GLY 389 1_555 A N MSE 390 A MSE 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale21 A C MSE 390 A MSE 390 1_555 A N GLY 391 A GLY 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale22 A C ALA 395 A ALA 395 1_555 A N MSE 396 A MSE 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale23 A C MSE 396 A MSE 396 1_555 A N SER 397 A SER 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale24 A C GLN 436 A GLN 436 1_555 A N MSE 437 A MSE 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale25 A C MSE 437 A MSE 437 1_555 A N GLY 438 A GLY 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale26 A C CYS 443 A CYS 443 1_555 A N MSE 444 A MSE 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale27 A C MSE 444 A MSE 444 1_555 A N GLY 445 A GLY 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale28 A C GLY 468 A GLY 468 1_555 A N MSE 469 A MSE 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale29 A C MSE 469 A MSE 469 1_555 A N LYS 470 A LYS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
metalc ? metalc1 A O GLY 302 A GLY 302 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.053 ? 
metalc ? metalc2 A O GLY 304 A GLY 304 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? 
metalc ? metalc3 A O CYS 307 A CYS 307 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? 
metalc ? metalc4 D K K . A K 703 1_555 E O HOH . A HOH 828 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.254 ? 
#
_chem_comp.formula           'C10 H13 N4 O8 P' 
_chem_comp.formula_weight    348.206 
_chem_comp.id                IMP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'INOSINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P IMP doub 173 n n 
P O2P IMP sing 174 n n 
P O3P IMP sing 175 n n 
P O5' IMP sing 176 n n 
O2P HOP2 IMP sing 177 n n 
O3P HOP3 IMP sing 178 n n 
O5' C5' IMP sing 179 n n 
C5' C4' IMP sing 180 n n 
C5' "H5'1" IMP sing 181 n n 
C5' "H5'2" IMP sing 182 n n 
C4' O4' IMP sing 183 n n 
C4' C3' IMP sing 184 n n 
C4' H4' IMP sing 185 n n 
O4' C1' IMP sing 186 n n 
C3' O3' IMP sing 187 n n 
C3' C2' IMP sing 188 n n 
C3' H3' IMP sing 189 n n 
O3' HO3' IMP sing 190 n n 
C2' O2' IMP sing 191 n n 
C2' C1' IMP sing 192 n n 
C2' H2' IMP sing 193 n n 
O2' HO2' IMP sing 194 n n 
C1' N9 IMP sing 195 n n 
C1' H1' IMP sing 196 n n 
N9 C8 IMP sing 197 n y 
N9 C4 IMP sing 198 n y 
C8 N7 IMP doub 199 n y 
C8 H8 IMP sing 200 n n 
N7 C5 IMP sing 201 n y 
C5 C6 IMP sing 202 n n 
C5 C4 IMP doub 203 n y 
C6 O6 IMP doub 204 n n 
C6 N1 IMP sing 205 n n 
N1 C2 IMP sing 206 n n 
N1 HN1 IMP sing 207 n n 
C2 N3 IMP doub 208 n n 
C2 H2 IMP sing 209 n n 
N3 C4 IMP sing 210 n n 
#
_atom_sites.entry_id                     4FXS 
_atom_sites.fract_transf_matrix[1][1]    0.008932 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008932 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005291 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IMP A 1 701 701 IMP IMP . 
C 3 MOA A 1 702 702 MOA MOA . 
D 4 K A 1 703 703 K K . 
E 5 HOH A 1 801 1 HOH HOH . 
E 5 HOH A 2 802 2 HOH HOH . 
E 5 HOH A 3 803 3 HOH HOH . 
E 5 HOH A 4 804 4 HOH HOH . 
E 5 HOH A 5 805 5 HOH HOH . 
E 5 HOH A 6 806 6 HOH HOH . 
E 5 HOH A 7 807 7 HOH HOH . 
E 5 HOH A 8 808 8 HOH HOH . 
E 5 HOH A 9 809 9 HOH HOH . 
E 5 HOH A 10 810 10 HOH HOH . 
E 5 HOH A 11 811 11 HOH HOH . 
E 5 HOH A 12 812 12 HOH HOH . 
E 5 HOH A 13 813 13 HOH HOH . 
E 5 HOH A 14 814 14 HOH HOH . 
E 5 HOH A 15 815 15 HOH HOH . 
E 5 HOH A 16 816 16 HOH HOH . 
E 5 HOH A 17 817 17 HOH HOH . 
E 5 HOH A 18 818 18 HOH HOH . 
E 5 HOH A 19 819 19 HOH HOH . 
E 5 HOH A 20 820 20 HOH HOH . 
E 5 HOH A 21 821 21 HOH HOH . 
E 5 HOH A 22 822 22 HOH HOH . 
E 5 HOH A 23 823 23 HOH HOH . 
E 5 HOH A 24 824 24 HOH HOH . 
E 5 HOH A 25 825 25 HOH HOH . 
E 5 HOH A 26 826 26 HOH HOH . 
E 5 HOH A 27 827 27 HOH HOH . 
E 5 HOH A 28 828 28 HOH HOH . 
E 5 HOH A 29 829 29 HOH HOH . 
E 5 HOH A 30 830 30 HOH HOH . 
E 5 HOH A 31 831 31 HOH HOH . 
E 5 HOH A 32 832 32 HOH HOH . 
E 5 HOH A 33 833 33 HOH HOH . 
E 5 HOH A 34 834 34 HOH HOH . 
E 5 HOH A 35 835 35 HOH HOH . 
E 5 HOH A 36 836 36 HOH HOH . 
E 5 HOH A 37 837 37 HOH HOH . 
E 5 HOH A 38 838 38 HOH HOH . 
E 5 HOH A 39 839 39 HOH HOH . 
E 5 HOH A 40 840 40 HOH HOH . 
E 5 HOH A 41 841 41 HOH HOH . 
E 5 HOH A 42 842 42 HOH HOH . 
E 5 HOH A 43 843 43 HOH HOH . 
E 5 HOH A 44 844 44 HOH HOH . 
E 5 HOH A 45 845 45 HOH HOH . 
E 5 HOH A 46 846 46 HOH HOH . 
E 5 HOH A 47 847 47 HOH HOH . 
E 5 HOH A 48 848 48 HOH HOH . 
E 5 HOH A 49 849 49 HOH HOH . 
E 5 HOH A 50 850 50 HOH HOH . 
E 5 HOH A 51 851 51 HOH HOH . 
E 5 HOH A 52 852 52 HOH HOH . 
E 5 HOH A 53 853 53 HOH HOH . 
E 5 HOH A 54 854 54 HOH HOH . 
E 5 HOH A 55 855 55 HOH HOH . 
E 5 HOH A 56 856 56 HOH HOH . 
E 5 HOH A 57 857 57 HOH HOH . 
E 5 HOH A 58 858 58 HOH HOH . 
E 5 HOH A 59 859 59 HOH HOH . 
E 5 HOH A 60 860 60 HOH HOH . 
E 5 HOH A 61 861 61 HOH HOH . 
E 5 HOH A 62 862 62 HOH HOH . 
E 5 HOH A 63 863 63 HOH HOH . 
E 5 HOH A 64 864 64 HOH HOH . 
E 5 HOH A 65 865 65 HOH HOH . 
E 5 HOH A 66 866 66 HOH HOH . 
E 5 HOH A 67 867 67 HOH HOH . 
E 5 HOH A 68 868 68 HOH HOH . 
E 5 HOH A 69 869 69 HOH HOH . 
E 5 HOH A 70 870 70 HOH HOH . 
E 5 HOH A 71 871 71 HOH HOH . 
E 5 HOH A 72 872 72 HOH HOH . 
E 5 HOH A 73 873 73 HOH HOH . 
E 5 HOH A 74 874 74 HOH HOH . 
E 5 HOH A 75 875 75 HOH HOH . 
E 5 HOH A 76 876 76 HOH HOH . 
E 5 HOH A 77 877 77 HOH HOH . 
E 5 HOH A 78 878 78 HOH HOH . 
E 5 HOH A 79 879 79 HOH HOH . 
E 5 HOH A 80 880 80 HOH HOH . 
E 5 HOH A 81 881 81 HOH HOH . 
E 5 HOH A 82 882 82 HOH HOH . 
E 5 HOH A 83 883 83 HOH HOH . 
E 5 HOH A 84 884 84 HOH HOH . 
E 5 HOH A 85 885 85 HOH HOH . 
E 5 HOH A 86 886 86 HOH HOH . 
E 5 HOH A 87 887 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P IMP . . . B 2 12.595 19.011 22.804 1 34.64 ? P IMP 701 A 1 
HETATM 2 O O1P IMP . . . B 2 11.79 20.263 23.049 1 35.64 ? O1P IMP 701 A 1 
HETATM 3 O O2P IMP . . . B 2 12.928 18.957 21.259 1 35.73 ? O2P IMP 701 A 1 
HETATM 4 O O3P IMP . . . B 2 11.655 17.878 23.391 1 35.68 ? O3P IMP 701 A 1 
HETATM 5 O O5' IMP . . . B 2 13.927 18.918 23.669 1 33.87 ? O5' IMP 701 A 1 
HETATM 6 C C5' IMP . . . B 2 15.005 19.844 23.475 1 34.23 ? C5' IMP 701 A 1 
HETATM 7 C C4' IMP . . . B 2 16.072 19.554 24.517 1 32.43 ? C4' IMP 701 A 1 
HETATM 8 O O4' IMP . . . B 2 16.762 18.298 24.37 1 33.54 ? O4' IMP 701 A 1 
HETATM 9 C C3' IMP . . . B 2 17.219 20.596 24.526 1 34.16 ? C3' IMP 701 A 1 
HETATM 10 O O3' IMP . . . B 2 16.758 21.808 25.172 1 37.86 ? O3' IMP 701 A 1 
HETATM 11 C C2' IMP . . . B 2 18.322 19.915 25.297 1 34.18 ? C2' IMP 701 A 1 
HETATM 12 O O2' IMP . . . B 2 17.873 19.789 26.67 1 35.45 ? O2' IMP 701 A 1 
HETATM 13 C C1' IMP . . . B 2 18.105 18.446 24.91 1 38.18 ? C1' IMP 701 A 1 
HETATM 14 N N9 IMP . . . B 2 18.983 18.021 23.83 1 41.56 ? N9 IMP 701 A 1 
HETATM 15 C C8 IMP . . . B 2 19.442 18.735 22.812 1 41.71 ? C8 IMP 701 A 1 
HETATM 16 N N7 IMP . . . B 2 20.215 17.936 22.063 1 42.27 ? N7 IMP 701 A 1 
HETATM 17 C C5 IMP . . . B 2 20.201 16.706 22.612 1 42.19 ? C5 IMP 701 A 1 
HETATM 18 C C6 IMP . . . B 2 20.753 15.471 22.254 1 45.44 ? C6 IMP 701 A 1 
HETATM 19 O O6 IMP . . . B 2 21.442 15.35 21.208 1 42.69 ? O6 IMP 701 A 1 
HETATM 20 N N1 IMP . . . B 2 20.583 14.414 23.076 1 47.65 ? N1 IMP 701 A 1 
HETATM 21 C C2 IMP . . . B 2 19.81 14.552 24.16 1 53.57 ? C2 IMP 701 A 1 
HETATM 22 N N3 IMP . . . B 2 19.232 15.726 24.511 1 49.29 ? N3 IMP 701 A 1 
HETATM 23 C C4 IMP . . . B 2 19.419 16.794 23.732 1 44.96 ? C4 IMP 701 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           407 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           23 
#