data_4FZP # _model_server_result.job_id lghYAyQfLx_VGVhyhGorRQ _model_server_result.datetime_utc '2024-11-22 22:07:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fzp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4FZP # _exptl.entry_id 4FZP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.028 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'URANYL (VI) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FZP _cell.length_a 44.032 _cell.length_b 46.929 _cell.length_c 65.756 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FZP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 11 A GLU 8 1_555 C U IUM . A IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc2 A OE1 GLU 11 A GLU 8 1_555 C U IUM . A IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc3 C U IUM . A IUM 101 1_555 E O HOH . A HOH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? metalc ? metalc4 B OE1 GLU 20 B GLU 17 1_555 D U IUM . B IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc5 B OE2 GLU 20 B GLU 17 1_555 D U IUM . B IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? metalc ? metalc6 B OD1 ASP 71 B ASP 68 1_555 D U IUM . B IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc7 B OD2 ASP 71 B ASP 68 1_555 D U IUM . B IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.072 ? metalc ? metalc8 B NH1 ARG 74 B ARG 71 1_555 D U IUM . B IUM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.805 ? metalc ? metalc9 D U IUM . B IUM 101 1_555 F O HOH . B HOH 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.135 ? metalc ? metalc10 D U IUM . B IUM 101 1_555 F O HOH . B HOH 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? # _chem_comp.formula 'O2 U 2' _chem_comp.formula_weight 270.028 _chem_comp.id IUM _chem_comp.mon_nstd_flag . _chem_comp.name 'URANYL (VI) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag U O1 IUM sing 154 n n U O2 IUM sing 155 n n # _atom_sites.entry_id 4FZP _atom_sites.fract_transf_matrix[1][1] 0.022711 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021309 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015208 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IUM A 1 101 2 IUM IUM . D 2 IUM B 1 101 1 IUM IUM . E 3 HOH A 1 201 1 HOH HOH . E 3 HOH A 2 202 3 HOH HOH . E 3 HOH A 3 203 4 HOH HOH . E 3 HOH A 4 204 5 HOH HOH . E 3 HOH A 5 205 10 HOH HOH . E 3 HOH A 6 206 12 HOH HOH . E 3 HOH A 7 207 13 HOH HOH . E 3 HOH A 8 208 16 HOH HOH . E 3 HOH A 9 209 17 HOH HOH . E 3 HOH A 10 210 18 HOH HOH . E 3 HOH A 11 211 23 HOH HOH . E 3 HOH A 12 212 24 HOH HOH . E 3 HOH A 13 213 26 HOH HOH . E 3 HOH A 14 214 27 HOH HOH . E 3 HOH A 15 215 31 HOH HOH . E 3 HOH A 16 216 33 HOH HOH . E 3 HOH A 17 217 34 HOH HOH . E 3 HOH A 18 218 35 HOH HOH . E 3 HOH A 19 219 40 HOH HOH . E 3 HOH A 20 220 41 HOH HOH . E 3 HOH A 21 221 48 HOH HOH . E 3 HOH A 22 222 50 HOH HOH . E 3 HOH A 23 223 52 HOH HOH . E 3 HOH A 24 224 53 HOH HOH . E 3 HOH A 25 225 54 HOH HOH . E 3 HOH A 26 226 56 HOH HOH . E 3 HOH A 27 227 60 HOH HOH . E 3 HOH A 28 228 62 HOH HOH . E 3 HOH A 29 229 63 HOH HOH . E 3 HOH A 30 230 65 HOH HOH . E 3 HOH A 31 231 66 HOH HOH . E 3 HOH A 32 232 70 HOH HOH . E 3 HOH A 33 233 71 HOH HOH . E 3 HOH A 34 234 73 HOH HOH . E 3 HOH A 35 235 74 HOH HOH . E 3 HOH A 36 236 76 HOH HOH . E 3 HOH A 37 237 77 HOH HOH . E 3 HOH A 38 238 78 HOH HOH . E 3 HOH A 39 239 80 HOH HOH . E 3 HOH A 40 240 82 HOH HOH . E 3 HOH A 41 241 85 HOH HOH . E 3 HOH A 42 242 87 HOH HOH . E 3 HOH A 43 243 89 HOH HOH . E 3 HOH A 44 244 92 HOH HOH . E 3 HOH A 45 245 93 HOH HOH . E 3 HOH A 46 246 95 HOH HOH . E 3 HOH A 47 247 96 HOH HOH . E 3 HOH A 48 248 97 HOH HOH . E 3 HOH A 49 249 102 HOH HOH . E 3 HOH A 50 250 106 HOH HOH . E 3 HOH A 51 251 107 HOH HOH . E 3 HOH A 52 252 109 HOH HOH . E 3 HOH A 53 253 111 HOH HOH . E 3 HOH A 54 254 112 HOH HOH . E 3 HOH A 55 255 113 HOH HOH . E 3 HOH A 56 256 114 HOH HOH . E 3 HOH A 57 257 115 HOH HOH . E 3 HOH A 58 258 118 HOH HOH . E 3 HOH A 59 259 119 HOH HOH . E 3 HOH A 60 260 125 HOH HOH . E 3 HOH A 61 261 126 HOH HOH . E 3 HOH A 62 262 127 HOH HOH . E 3 HOH A 63 263 128 HOH HOH . E 3 HOH A 64 264 130 HOH HOH . E 3 HOH A 65 265 131 HOH HOH . F 3 HOH B 1 201 2 HOH HOH . F 3 HOH B 2 202 6 HOH HOH . F 3 HOH B 3 203 7 HOH HOH . F 3 HOH B 4 204 9 HOH HOH . F 3 HOH B 5 205 11 HOH HOH . F 3 HOH B 6 206 14 HOH HOH . F 3 HOH B 7 207 15 HOH HOH . F 3 HOH B 8 208 19 HOH HOH . F 3 HOH B 9 209 20 HOH HOH . F 3 HOH B 10 210 21 HOH HOH . F 3 HOH B 11 211 22 HOH HOH . F 3 HOH B 12 212 25 HOH HOH . F 3 HOH B 13 213 28 HOH HOH . F 3 HOH B 14 214 29 HOH HOH . F 3 HOH B 15 215 30 HOH HOH . F 3 HOH B 16 216 32 HOH HOH . F 3 HOH B 17 217 36 HOH HOH . F 3 HOH B 18 218 37 HOH HOH . F 3 HOH B 19 219 39 HOH HOH . F 3 HOH B 20 220 42 HOH HOH . F 3 HOH B 21 221 43 HOH HOH . F 3 HOH B 22 222 44 HOH HOH . F 3 HOH B 23 223 45 HOH HOH . F 3 HOH B 24 224 46 HOH HOH . F 3 HOH B 25 225 47 HOH HOH . F 3 HOH B 26 226 49 HOH HOH . F 3 HOH B 27 227 51 HOH HOH . F 3 HOH B 28 228 55 HOH HOH . F 3 HOH B 29 229 58 HOH HOH . F 3 HOH B 30 230 59 HOH HOH . F 3 HOH B 31 231 61 HOH HOH . F 3 HOH B 32 232 64 HOH HOH . F 3 HOH B 33 233 67 HOH HOH . F 3 HOH B 34 234 68 HOH HOH . F 3 HOH B 35 235 72 HOH HOH . F 3 HOH B 36 236 75 HOH HOH . F 3 HOH B 37 237 79 HOH HOH . F 3 HOH B 38 238 81 HOH HOH . F 3 HOH B 39 239 83 HOH HOH . F 3 HOH B 40 240 84 HOH HOH . F 3 HOH B 41 241 86 HOH HOH . F 3 HOH B 42 242 90 HOH HOH . F 3 HOH B 43 243 91 HOH HOH . F 3 HOH B 44 244 94 HOH HOH . F 3 HOH B 45 245 98 HOH HOH . F 3 HOH B 46 246 99 HOH HOH . F 3 HOH B 47 247 101 HOH HOH . F 3 HOH B 48 248 103 HOH HOH . F 3 HOH B 49 249 105 HOH HOH . F 3 HOH B 50 250 121 HOH HOH . F 3 HOH B 51 251 122 HOH HOH . F 3 HOH B 52 252 123 HOH HOH . F 3 HOH B 53 253 124 HOH HOH . F 3 HOH B 54 254 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 U U IUM . . . D 2 -21.997 7.085 4.942 0.33 16.59 ? U IUM 101 B 1 HETATM 2 O O1 IUM . . . D 2 -22.206 8.77 4.356 0.33 14.65 ? O1 IUM 101 B 1 HETATM 3 O O2 IUM . . . D 2 -21.869 5.395 5.546 0.33 12.32 ? O2 IUM 101 B 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #