data_4FZW # _model_server_result.job_id nkDgBNLwTqdRIOenuEVUxQ _model_server_result.datetime_utc '2024-11-15 05:56:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 4FZW # _exptl.entry_id 4FZW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FZW _cell.length_a 131.976 _cell.length_b 131.976 _cell.length_c 153.865 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -65.988 114.294569 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -131.976 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4FZW _atom_sites.fract_transf_matrix[1][1] 0.007577 _atom_sites.fract_transf_matrix[1][2] 0.004375 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008749 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006499 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 301 3 GOL GOL . F 3 GOL B 1 301 1 GOL GOL . G 3 GOL B 1 302 2 GOL GOL . H 4 HOH A 1 401 6 HOH HOH . H 4 HOH A 2 402 8 HOH HOH . H 4 HOH A 3 403 12 HOH HOH . H 4 HOH A 4 404 14 HOH HOH . H 4 HOH A 5 405 17 HOH HOH . H 4 HOH A 6 406 19 HOH HOH . H 4 HOH A 7 407 20 HOH HOH . H 4 HOH A 8 408 24 HOH HOH . H 4 HOH A 9 409 29 HOH HOH . H 4 HOH A 10 410 33 HOH HOH . H 4 HOH A 11 411 39 HOH HOH . H 4 HOH A 12 412 46 HOH HOH . H 4 HOH A 13 413 49 HOH HOH . H 4 HOH A 14 414 51 HOH HOH . H 4 HOH A 15 415 52 HOH HOH . H 4 HOH A 16 416 54 HOH HOH . H 4 HOH A 17 417 56 HOH HOH . H 4 HOH A 18 418 58 HOH HOH . H 4 HOH A 19 419 59 HOH HOH . H 4 HOH A 20 420 62 HOH HOH . H 4 HOH A 21 421 66 HOH HOH . H 4 HOH A 22 422 67 HOH HOH . H 4 HOH A 23 423 73 HOH HOH . H 4 HOH A 24 424 80 HOH HOH . H 4 HOH A 25 425 83 HOH HOH . H 4 HOH A 26 426 87 HOH HOH . H 4 HOH A 27 427 95 HOH HOH . H 4 HOH A 28 428 109 HOH HOH . H 4 HOH A 29 429 111 HOH HOH . I 4 HOH B 1 401 4 HOH HOH . I 4 HOH B 2 402 5 HOH HOH . I 4 HOH B 3 403 7 HOH HOH . I 4 HOH B 4 404 10 HOH HOH . I 4 HOH B 5 405 11 HOH HOH . I 4 HOH B 6 406 13 HOH HOH . I 4 HOH B 7 407 15 HOH HOH . I 4 HOH B 8 408 16 HOH HOH . I 4 HOH B 9 409 21 HOH HOH . I 4 HOH B 10 410 23 HOH HOH . I 4 HOH B 11 411 27 HOH HOH . I 4 HOH B 12 412 28 HOH HOH . I 4 HOH B 13 413 34 HOH HOH . I 4 HOH B 14 414 41 HOH HOH . I 4 HOH B 15 415 44 HOH HOH . I 4 HOH B 16 416 48 HOH HOH . I 4 HOH B 17 417 53 HOH HOH . I 4 HOH B 18 418 55 HOH HOH . I 4 HOH B 19 419 60 HOH HOH . I 4 HOH B 20 420 61 HOH HOH . I 4 HOH B 21 421 64 HOH HOH . I 4 HOH B 22 422 69 HOH HOH . I 4 HOH B 23 423 71 HOH HOH . I 4 HOH B 24 424 72 HOH HOH . I 4 HOH B 25 425 75 HOH HOH . I 4 HOH B 26 426 78 HOH HOH . I 4 HOH B 27 427 82 HOH HOH . I 4 HOH B 28 428 85 HOH HOH . I 4 HOH B 29 429 89 HOH HOH . I 4 HOH B 30 430 100 HOH HOH . I 4 HOH B 31 431 102 HOH HOH . I 4 HOH B 32 432 105 HOH HOH . I 4 HOH B 33 433 106 HOH HOH . I 4 HOH B 34 434 107 HOH HOH . I 4 HOH B 35 435 108 HOH HOH . I 4 HOH B 36 436 110 HOH HOH . J 4 HOH C 1 301 3 HOH HOH . J 4 HOH C 2 302 22 HOH HOH . J 4 HOH C 3 303 30 HOH HOH . J 4 HOH C 4 304 32 HOH HOH . J 4 HOH C 5 305 36 HOH HOH . J 4 HOH C 6 306 37 HOH HOH . J 4 HOH C 7 307 38 HOH HOH . J 4 HOH C 8 308 43 HOH HOH . J 4 HOH C 9 309 45 HOH HOH . J 4 HOH C 10 310 47 HOH HOH . J 4 HOH C 11 311 50 HOH HOH . J 4 HOH C 12 312 57 HOH HOH . J 4 HOH C 13 313 65 HOH HOH . J 4 HOH C 14 314 68 HOH HOH . J 4 HOH C 15 315 70 HOH HOH . J 4 HOH C 16 316 74 HOH HOH . J 4 HOH C 17 317 77 HOH HOH . J 4 HOH C 18 318 81 HOH HOH . J 4 HOH C 19 319 88 HOH HOH . J 4 HOH C 20 320 90 HOH HOH . J 4 HOH C 21 321 92 HOH HOH . J 4 HOH C 22 322 93 HOH HOH . J 4 HOH C 23 323 112 HOH HOH . J 4 HOH C 24 324 113 HOH HOH . J 4 HOH C 25 325 114 HOH HOH . K 4 HOH D 1 301 1 HOH HOH . K 4 HOH D 2 302 2 HOH HOH . K 4 HOH D 3 303 9 HOH HOH . K 4 HOH D 4 304 18 HOH HOH . K 4 HOH D 5 305 25 HOH HOH . K 4 HOH D 6 306 26 HOH HOH . K 4 HOH D 7 307 31 HOH HOH . K 4 HOH D 8 308 35 HOH HOH . K 4 HOH D 9 309 40 HOH HOH . K 4 HOH D 10 310 42 HOH HOH . K 4 HOH D 11 311 63 HOH HOH . K 4 HOH D 12 312 76 HOH HOH . K 4 HOH D 13 313 79 HOH HOH . K 4 HOH D 14 314 84 HOH HOH . K 4 HOH D 15 315 86 HOH HOH . K 4 HOH D 16 316 91 HOH HOH . K 4 HOH D 17 317 94 HOH HOH . K 4 HOH D 18 318 96 HOH HOH . K 4 HOH D 19 319 97 HOH HOH . K 4 HOH D 20 320 98 HOH HOH . K 4 HOH D 21 321 99 HOH HOH . K 4 HOH D 22 322 101 HOH HOH . K 4 HOH D 23 323 103 HOH HOH . K 4 HOH D 24 324 104 HOH HOH . K 4 HOH D 25 325 115 HOH HOH . K 4 HOH D 26 326 116 HOH HOH . K 4 HOH D 27 327 117 HOH HOH . K 4 HOH D 28 328 118 HOH HOH . K 4 HOH D 29 329 119 HOH HOH . K 4 HOH D 30 330 120 HOH HOH . K 4 HOH D 31 331 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 -53.95 58.519 15.156 1 54.98 ? C1 GOL 302 B 1 HETATM 2 O O1 GOL . . . G 3 -55.018 57.61 14.98 1 44 ? O1 GOL 302 B 1 HETATM 3 C C2 GOL . . . G 3 -52.922 58.423 14.049 1 58.53 ? C2 GOL 302 B 1 HETATM 4 O O2 GOL . . . G 3 -53.095 59.28 12.966 1 63.7 ? O2 GOL 302 B 1 HETATM 5 C C3 GOL . . . G 3 -51.531 57.887 14.323 1 55.19 ? C3 GOL 302 B 1 HETATM 6 O O3 GOL . . . G 3 -50.893 57.378 13.18 1 49.88 ? O3 GOL 302 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #