data_4G05 # _model_server_result.job_id 7xd_a_A2hV-U-EqygpV88g _model_server_result.datetime_utc '2024-12-22 07:32:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g05 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 4G05 # _exptl.entry_id 4G05 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 124.137 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Guaiacol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4G05 _cell.length_a 96.43 _cell.length_b 96.43 _cell.length_c 98.78 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G05 _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 15 A CYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 A SG CYS 14 A CYS 14 1_555 A SG CYS 278 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf3 A SG CYS 34 A CYS 34 1_555 A SG CYS 114 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 A SG CYS 242 A CYS 242 1_555 A SG CYS 307 A CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc1 A OD1 ASP 48 A ASP 48 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc2 A O ASP 48 A ASP 48 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc3 A O GLY 60 A GLY 60 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc4 A OD1 ASP 62 A ASP 62 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc5 A OG SER 64 A SER 64 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc6 A NE2 HIS 169 A HIS 169 1_555 B FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc7 A O SER 170 A SER 170 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc8 A OG SER 170 A SER 170 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc9 A OD2 ASP 187 A ASP 187 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc10 A OD1 ASP 187 A ASP 187 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc11 A O THR 189 A THR 189 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc12 A OG1 THR 189 A THR 189 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc13 A O VAL 192 A VAL 192 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc14 A OD1 ASP 194 A ASP 194 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc15 B FE HEM . A HEM 401 1_555 G O HOH . A HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc16 C CA CA . A CA 402 1_555 G O HOH . A HOH 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc17 C CA CA . A CA 402 1_555 G O HOH . A HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? # _chem_comp.formula 'C7 H8 O2' _chem_comp.formula_weight 124.137 _chem_comp.id JZ3 _chem_comp.mon_nstd_flag . _chem_comp.name Guaiacol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-methoxyphenol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA OAG JZ3 sing 255 n n OAG CAI JZ3 sing 256 n n CAI CAF JZ3 doub 257 n y CAI CAH JZ3 sing 258 n y CAF CAD JZ3 sing 259 n y CAD CAC JZ3 doub 260 n y CAC CAE JZ3 sing 261 n y CAE CAH JZ3 doub 262 n y CAH OAB JZ3 sing 263 n n CAA HAA JZ3 sing 264 n n CAA HAAA JZ3 sing 265 n n CAA HAAB JZ3 sing 266 n n CAF HAF JZ3 sing 267 n n CAD HAD JZ3 sing 268 n n CAC HAC JZ3 sing 269 n n CAE HAE JZ3 sing 270 n n OAB HOAB JZ3 sing 271 n n # _atom_sites.entry_id 4G05 _atom_sites.fract_transf_matrix[1][1] 0.01037 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 401 1320 HEM HEM . C 3 CA A 1 402 1 CA CA . D 3 CA A 1 403 2 CA CA . E 4 JZ3 A 1 404 1 JZ3 JZ3 . F 5 SO4 A 1 405 1 SO4 SO4 . G 6 HOH A 1 501 2 HOH HOH . G 6 HOH A 2 502 4 HOH HOH . G 6 HOH A 3 503 5 HOH HOH . G 6 HOH A 4 504 6 HOH HOH . G 6 HOH A 5 505 7 HOH HOH . G 6 HOH A 6 506 8 HOH HOH . G 6 HOH A 7 507 9 HOH HOH . G 6 HOH A 8 508 10 HOH HOH . G 6 HOH A 9 509 11 HOH HOH . G 6 HOH A 10 510 12 HOH HOH . G 6 HOH A 11 511 13 HOH HOH . G 6 HOH A 12 512 14 HOH HOH . G 6 HOH A 13 513 15 HOH HOH . G 6 HOH A 14 514 16 HOH HOH . G 6 HOH A 15 515 17 HOH HOH . G 6 HOH A 16 516 18 HOH HOH . G 6 HOH A 17 517 19 HOH HOH . G 6 HOH A 18 518 20 HOH HOH . G 6 HOH A 19 519 21 HOH HOH . G 6 HOH A 20 520 22 HOH HOH . G 6 HOH A 21 521 23 HOH HOH . G 6 HOH A 22 522 24 HOH HOH . G 6 HOH A 23 523 25 HOH HOH . G 6 HOH A 24 524 26 HOH HOH . G 6 HOH A 25 525 27 HOH HOH . G 6 HOH A 26 526 29 HOH HOH . G 6 HOH A 27 527 30 HOH HOH . G 6 HOH A 28 528 31 HOH HOH . G 6 HOH A 29 529 32 HOH HOH . G 6 HOH A 30 530 33 HOH HOH . G 6 HOH A 31 531 34 HOH HOH . G 6 HOH A 32 532 35 HOH HOH . G 6 HOH A 33 533 36 HOH HOH . G 6 HOH A 34 534 37 HOH HOH . G 6 HOH A 35 535 38 HOH HOH . G 6 HOH A 36 536 39 HOH HOH . G 6 HOH A 37 537 40 HOH HOH . G 6 HOH A 38 538 41 HOH HOH . G 6 HOH A 39 539 42 HOH HOH . G 6 HOH A 40 540 43 HOH HOH . G 6 HOH A 41 541 44 HOH HOH . G 6 HOH A 42 542 45 HOH HOH . G 6 HOH A 43 543 46 HOH HOH . G 6 HOH A 44 544 47 HOH HOH . G 6 HOH A 45 545 48 HOH HOH . G 6 HOH A 46 546 49 HOH HOH . G 6 HOH A 47 547 50 HOH HOH . G 6 HOH A 48 548 51 HOH HOH . G 6 HOH A 49 549 52 HOH HOH . G 6 HOH A 50 550 53 HOH HOH . G 6 HOH A 51 551 55 HOH HOH . G 6 HOH A 52 552 56 HOH HOH . G 6 HOH A 53 553 57 HOH HOH . G 6 HOH A 54 554 58 HOH HOH . G 6 HOH A 55 555 59 HOH HOH . G 6 HOH A 56 556 60 HOH HOH . G 6 HOH A 57 557 61 HOH HOH . G 6 HOH A 58 558 62 HOH HOH . G 6 HOH A 59 559 63 HOH HOH . G 6 HOH A 60 560 64 HOH HOH . G 6 HOH A 61 561 65 HOH HOH . G 6 HOH A 62 562 66 HOH HOH . G 6 HOH A 63 563 67 HOH HOH . G 6 HOH A 64 564 68 HOH HOH . G 6 HOH A 65 565 69 HOH HOH . G 6 HOH A 66 566 70 HOH HOH . G 6 HOH A 67 567 71 HOH HOH . G 6 HOH A 68 568 72 HOH HOH . G 6 HOH A 69 569 73 HOH HOH . G 6 HOH A 70 570 74 HOH HOH . G 6 HOH A 71 571 75 HOH HOH . G 6 HOH A 72 572 76 HOH HOH . G 6 HOH A 73 573 77 HOH HOH . G 6 HOH A 74 574 78 HOH HOH . G 6 HOH A 75 575 79 HOH HOH . G 6 HOH A 76 576 80 HOH HOH . G 6 HOH A 77 577 81 HOH HOH . G 6 HOH A 78 578 82 HOH HOH . G 6 HOH A 79 579 83 HOH HOH . G 6 HOH A 80 580 84 HOH HOH . G 6 HOH A 81 581 85 HOH HOH . G 6 HOH A 82 582 86 HOH HOH . G 6 HOH A 83 583 87 HOH HOH . G 6 HOH A 84 584 88 HOH HOH . G 6 HOH A 85 585 89 HOH HOH . G 6 HOH A 86 586 90 HOH HOH . G 6 HOH A 87 587 91 HOH HOH . G 6 HOH A 88 588 92 HOH HOH . G 6 HOH A 89 589 93 HOH HOH . G 6 HOH A 90 590 94 HOH HOH . G 6 HOH A 91 591 95 HOH HOH . G 6 HOH A 92 592 96 HOH HOH . G 6 HOH A 93 593 97 HOH HOH . G 6 HOH A 94 594 99 HOH HOH . G 6 HOH A 95 595 100 HOH HOH . G 6 HOH A 96 596 101 HOH HOH . G 6 HOH A 97 597 102 HOH HOH . G 6 HOH A 98 598 103 HOH HOH . G 6 HOH A 99 599 104 HOH HOH . G 6 HOH A 100 600 105 HOH HOH . G 6 HOH A 101 601 106 HOH HOH . G 6 HOH A 102 602 107 HOH HOH . G 6 HOH A 103 603 108 HOH HOH . G 6 HOH A 104 604 109 HOH HOH . G 6 HOH A 105 605 110 HOH HOH . G 6 HOH A 106 606 111 HOH HOH . G 6 HOH A 107 607 113 HOH HOH . G 6 HOH A 108 608 114 HOH HOH . G 6 HOH A 109 609 115 HOH HOH . G 6 HOH A 110 610 116 HOH HOH . G 6 HOH A 111 611 117 HOH HOH . G 6 HOH A 112 612 118 HOH HOH . G 6 HOH A 113 613 119 HOH HOH . G 6 HOH A 114 614 120 HOH HOH . G 6 HOH A 115 615 121 HOH HOH . G 6 HOH A 116 616 122 HOH HOH . G 6 HOH A 117 617 123 HOH HOH . G 6 HOH A 118 618 124 HOH HOH . G 6 HOH A 119 619 126 HOH HOH . G 6 HOH A 120 620 127 HOH HOH . G 6 HOH A 121 621 128 HOH HOH . G 6 HOH A 122 622 129 HOH HOH . G 6 HOH A 123 623 130 HOH HOH . G 6 HOH A 124 624 131 HOH HOH . G 6 HOH A 125 625 132 HOH HOH . G 6 HOH A 126 626 133 HOH HOH . G 6 HOH A 127 627 135 HOH HOH . G 6 HOH A 128 628 136 HOH HOH . G 6 HOH A 129 629 137 HOH HOH . G 6 HOH A 130 630 139 HOH HOH . G 6 HOH A 131 631 140 HOH HOH . G 6 HOH A 132 632 141 HOH HOH . G 6 HOH A 133 633 142 HOH HOH . G 6 HOH A 134 634 143 HOH HOH . G 6 HOH A 135 635 144 HOH HOH . G 6 HOH A 136 636 145 HOH HOH . G 6 HOH A 137 637 147 HOH HOH . G 6 HOH A 138 638 148 HOH HOH . G 6 HOH A 139 639 149 HOH HOH . G 6 HOH A 140 640 151 HOH HOH . G 6 HOH A 141 641 153 HOH HOH . G 6 HOH A 142 642 154 HOH HOH . G 6 HOH A 143 643 155 HOH HOH . G 6 HOH A 144 644 156 HOH HOH . G 6 HOH A 145 645 157 HOH HOH . G 6 HOH A 146 646 158 HOH HOH . G 6 HOH A 147 647 159 HOH HOH . G 6 HOH A 148 648 163 HOH HOH . G 6 HOH A 149 649 165 HOH HOH . G 6 HOH A 150 650 166 HOH HOH . G 6 HOH A 151 651 167 HOH HOH . G 6 HOH A 152 652 168 HOH HOH . G 6 HOH A 153 653 169 HOH HOH . G 6 HOH A 154 654 170 HOH HOH . G 6 HOH A 155 655 171 HOH HOH . G 6 HOH A 156 656 172 HOH HOH . G 6 HOH A 157 657 173 HOH HOH . G 6 HOH A 158 658 174 HOH HOH . G 6 HOH A 159 659 175 HOH HOH . G 6 HOH A 160 660 176 HOH HOH . G 6 HOH A 161 661 177 HOH HOH . G 6 HOH A 162 662 178 HOH HOH . G 6 HOH A 163 663 179 HOH HOH . G 6 HOH A 164 664 180 HOH HOH . G 6 HOH A 165 665 181 HOH HOH . G 6 HOH A 166 666 182 HOH HOH . G 6 HOH A 167 667 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA JZ3 . . . E 4 -3.622 20.3 3.492 1 16.79 ? CAA JZ3 404 A 1 HETATM 2 O OAG JZ3 . . . E 4 -4.781 19.986 4.228 1 25.4 ? OAG JZ3 404 A 1 HETATM 3 C CAI JZ3 . . . E 4 -5.954 20.856 4.338 1 25.59 ? CAI JZ3 404 A 1 HETATM 4 C CAF JZ3 . . . E 4 -7.027 20.449 5.177 1 21.82 ? CAF JZ3 404 A 1 HETATM 5 C CAD JZ3 . . . E 4 -8.184 21.228 5.277 1 23.35 ? CAD JZ3 404 A 1 HETATM 6 C CAC JZ3 . . . E 4 -8.358 22.431 4.598 1 21.19 ? CAC JZ3 404 A 1 HETATM 7 C CAE JZ3 . . . E 4 -7.314 22.891 3.804 1 22.67 ? CAE JZ3 404 A 1 HETATM 8 C CAH JZ3 . . . E 4 -6.11 22.123 3.627 1 25.55 ? CAH JZ3 404 A 1 HETATM 9 O OAB JZ3 . . . E 4 -5.141 22.643 2.755 1 21.4 ? OAB JZ3 404 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 9 #