data_4G28 # _model_server_result.job_id YoGVswEoRKveA470ebUbrg _model_server_result.datetime_utc '2024-12-26 17:03:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1002}' # _entry.id 4G28 # _exptl.entry_id 4G28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.02 _cell.angle_gamma 90 _cell.entry_id 4G28 _cell.length_a 77.02 _cell.length_b 66.67 _cell.length_c 64.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 72.468804 0 64.760273 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 21 R ASP 20 1_555 D CA CA . R CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc2 B OD1 ASP 23 R ASP 22 1_555 D CA CA . R CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc3 B OD1 ASP 25 R ASP 24 1_555 D CA CA . R CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc4 B O THR 27 R THR 26 1_555 D CA CA . R CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc5 B OE1 GLU 32 R GLU 31 1_555 D CA CA . R CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc6 B OE2 GLU 32 R GLU 31 1_555 D CA CA . R CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc7 B OD1 ASP 57 R ASP 56 1_555 E CA CA . R CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc8 B OD2 ASP 59 R ASP 58 1_555 E CA CA . R CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 B OD1 ASN 61 R ASN 60 1_555 E CA CA . R CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc10 B O THR 63 R THR 62 1_555 E CA CA . R CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc11 B OE1 GLU 68 R GLU 67 1_555 E CA CA . R CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc12 B OE2 GLU 68 R GLU 67 1_555 E CA CA . R CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc13 D CA CA . R CA 1001 1_555 K O HOH . R HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc14 E CA CA . R CA 1002 1_555 K O HOH . R HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4G28 _atom_sites.fract_transf_matrix[1][1] 0.012984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000912 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014999 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015442 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 B 1 501 2 SO4 SO4 . D 4 CA R 1 1001 1001 CA CA . E 4 CA R 1 1002 1002 CA CA . F 5 GOL R 1 1003 1 GOL GOL . G 3 SO4 R 1 1004 3 SO4 SO4 . H 3 SO4 R 1 1005 4 SO4 SO4 . I 6 0W8 R 1 1006 1 0W8 0W8 . J 7 HOH B 1 601 4 HOH HOH . J 7 HOH B 2 602 13 HOH HOH . J 7 HOH B 3 603 18 HOH HOH . J 7 HOH B 4 604 23 HOH HOH . J 7 HOH B 5 605 27 HOH HOH . J 7 HOH B 6 606 28 HOH HOH . J 7 HOH B 7 607 33 HOH HOH . J 7 HOH B 8 608 34 HOH HOH . J 7 HOH B 9 609 37 HOH HOH . J 7 HOH B 10 610 40 HOH HOH . J 7 HOH B 11 611 43 HOH HOH . J 7 HOH B 12 612 44 HOH HOH . J 7 HOH B 13 613 48 HOH HOH . J 7 HOH B 14 614 49 HOH HOH . J 7 HOH B 15 615 50 HOH HOH . J 7 HOH B 16 616 52 HOH HOH . J 7 HOH B 17 617 53 HOH HOH . J 7 HOH B 18 618 58 HOH HOH . J 7 HOH B 19 619 59 HOH HOH . J 7 HOH B 20 620 63 HOH HOH . J 7 HOH B 21 621 64 HOH HOH . J 7 HOH B 22 622 65 HOH HOH . J 7 HOH B 23 623 66 HOH HOH . J 7 HOH B 24 624 69 HOH HOH . J 7 HOH B 25 625 73 HOH HOH . J 7 HOH B 26 626 74 HOH HOH . J 7 HOH B 27 627 76 HOH HOH . J 7 HOH B 28 628 79 HOH HOH . J 7 HOH B 29 629 82 HOH HOH . J 7 HOH B 30 630 83 HOH HOH . J 7 HOH B 31 631 86 HOH HOH . J 7 HOH B 32 632 88 HOH HOH . J 7 HOH B 33 633 89 HOH HOH . J 7 HOH B 34 634 92 HOH HOH . J 7 HOH B 35 635 93 HOH HOH . J 7 HOH B 36 636 95 HOH HOH . J 7 HOH B 37 637 96 HOH HOH . J 7 HOH B 38 638 99 HOH HOH . J 7 HOH B 39 639 100 HOH HOH . J 7 HOH B 40 640 108 HOH HOH . J 7 HOH B 41 641 111 HOH HOH . J 7 HOH B 42 642 112 HOH HOH . J 7 HOH B 43 643 116 HOH HOH . J 7 HOH B 44 644 120 HOH HOH . J 7 HOH B 45 645 122 HOH HOH . J 7 HOH B 46 646 124 HOH HOH . J 7 HOH B 47 647 127 HOH HOH . J 7 HOH B 48 648 129 HOH HOH . J 7 HOH B 49 649 134 HOH HOH . J 7 HOH B 50 650 135 HOH HOH . J 7 HOH B 51 651 136 HOH HOH . J 7 HOH B 52 652 142 HOH HOH . J 7 HOH B 53 653 146 HOH HOH . J 7 HOH B 54 654 147 HOH HOH . J 7 HOH B 55 655 149 HOH HOH . J 7 HOH B 56 656 153 HOH HOH . J 7 HOH B 57 657 154 HOH HOH . J 7 HOH B 58 658 156 HOH HOH . J 7 HOH B 59 659 160 HOH HOH . J 7 HOH B 60 660 162 HOH HOH . J 7 HOH B 61 661 163 HOH HOH . J 7 HOH B 62 662 168 HOH HOH . J 7 HOH B 63 663 170 HOH HOH . J 7 HOH B 64 664 174 HOH HOH . J 7 HOH B 65 665 176 HOH HOH . J 7 HOH B 66 666 178 HOH HOH . J 7 HOH B 67 667 182 HOH HOH . J 7 HOH B 68 668 183 HOH HOH . J 7 HOH B 69 669 186 HOH HOH . J 7 HOH B 70 670 189 HOH HOH . J 7 HOH B 71 671 191 HOH HOH . J 7 HOH B 72 672 200 HOH HOH . J 7 HOH B 73 673 201 HOH HOH . J 7 HOH B 74 674 203 HOH HOH . J 7 HOH B 75 675 204 HOH HOH . J 7 HOH B 76 676 205 HOH HOH . J 7 HOH B 77 677 208 HOH HOH . J 7 HOH B 78 678 209 HOH HOH . J 7 HOH B 79 679 212 HOH HOH . J 7 HOH B 80 680 213 HOH HOH . J 7 HOH B 81 681 214 HOH HOH . J 7 HOH B 82 682 217 HOH HOH . J 7 HOH B 83 683 220 HOH HOH . J 7 HOH B 84 684 221 HOH HOH . J 7 HOH B 85 685 223 HOH HOH . J 7 HOH B 86 686 224 HOH HOH . J 7 HOH B 87 687 230 HOH HOH . J 7 HOH B 88 688 235 HOH HOH . J 7 HOH B 89 689 240 HOH HOH . J 7 HOH B 90 690 242 HOH HOH . J 7 HOH B 91 691 246 HOH HOH . J 7 HOH B 92 692 247 HOH HOH . J 7 HOH B 93 693 248 HOH HOH . J 7 HOH B 94 694 251 HOH HOH . K 7 HOH R 1 1101 1 HOH HOH . K 7 HOH R 2 1102 2 HOH HOH . K 7 HOH R 3 1103 3 HOH HOH . K 7 HOH R 4 1104 5 HOH HOH . K 7 HOH R 5 1105 6 HOH HOH . K 7 HOH R 6 1106 7 HOH HOH . K 7 HOH R 7 1107 8 HOH HOH . K 7 HOH R 8 1108 9 HOH HOH . K 7 HOH R 9 1109 10 HOH HOH . K 7 HOH R 10 1110 11 HOH HOH . K 7 HOH R 11 1111 12 HOH HOH . K 7 HOH R 12 1112 14 HOH HOH . K 7 HOH R 13 1113 15 HOH HOH . K 7 HOH R 14 1114 16 HOH HOH . K 7 HOH R 15 1115 17 HOH HOH . K 7 HOH R 16 1116 19 HOH HOH . K 7 HOH R 17 1117 20 HOH HOH . K 7 HOH R 18 1118 21 HOH HOH . K 7 HOH R 19 1119 22 HOH HOH . K 7 HOH R 20 1120 24 HOH HOH . K 7 HOH R 21 1121 25 HOH HOH . K 7 HOH R 22 1122 26 HOH HOH . K 7 HOH R 23 1123 29 HOH HOH . K 7 HOH R 24 1124 30 HOH HOH . K 7 HOH R 25 1125 31 HOH HOH . K 7 HOH R 26 1126 32 HOH HOH . K 7 HOH R 27 1127 35 HOH HOH . K 7 HOH R 28 1128 36 HOH HOH . K 7 HOH R 29 1129 38 HOH HOH . K 7 HOH R 30 1130 39 HOH HOH . K 7 HOH R 31 1131 41 HOH HOH . K 7 HOH R 32 1132 42 HOH HOH . K 7 HOH R 33 1133 45 HOH HOH . K 7 HOH R 34 1134 46 HOH HOH . K 7 HOH R 35 1135 47 HOH HOH . K 7 HOH R 36 1136 51 HOH HOH . K 7 HOH R 37 1137 54 HOH HOH . K 7 HOH R 38 1138 55 HOH HOH . K 7 HOH R 39 1139 56 HOH HOH . K 7 HOH R 40 1140 57 HOH HOH . K 7 HOH R 41 1141 60 HOH HOH . K 7 HOH R 42 1142 61 HOH HOH . K 7 HOH R 43 1143 62 HOH HOH . K 7 HOH R 44 1144 67 HOH HOH . K 7 HOH R 45 1145 68 HOH HOH . K 7 HOH R 46 1146 70 HOH HOH . K 7 HOH R 47 1147 71 HOH HOH . K 7 HOH R 48 1148 72 HOH HOH . K 7 HOH R 49 1149 75 HOH HOH . K 7 HOH R 50 1150 77 HOH HOH . K 7 HOH R 51 1151 78 HOH HOH . K 7 HOH R 52 1152 80 HOH HOH . K 7 HOH R 53 1153 81 HOH HOH . K 7 HOH R 54 1154 84 HOH HOH . K 7 HOH R 55 1155 85 HOH HOH . K 7 HOH R 56 1156 87 HOH HOH . K 7 HOH R 57 1157 90 HOH HOH . K 7 HOH R 58 1158 91 HOH HOH . K 7 HOH R 59 1159 94 HOH HOH . K 7 HOH R 60 1160 97 HOH HOH . K 7 HOH R 61 1161 98 HOH HOH . K 7 HOH R 62 1162 101 HOH HOH . K 7 HOH R 63 1163 102 HOH HOH . K 7 HOH R 64 1164 103 HOH HOH . K 7 HOH R 65 1165 104 HOH HOH . K 7 HOH R 66 1166 105 HOH HOH . K 7 HOH R 67 1167 106 HOH HOH . K 7 HOH R 68 1168 107 HOH HOH . K 7 HOH R 69 1169 109 HOH HOH . K 7 HOH R 70 1170 110 HOH HOH . K 7 HOH R 71 1171 113 HOH HOH . K 7 HOH R 72 1172 114 HOH HOH . K 7 HOH R 73 1173 115 HOH HOH . K 7 HOH R 74 1174 117 HOH HOH . K 7 HOH R 75 1175 118 HOH HOH . K 7 HOH R 76 1176 119 HOH HOH . K 7 HOH R 77 1177 121 HOH HOH . K 7 HOH R 78 1178 123 HOH HOH . K 7 HOH R 79 1179 125 HOH HOH . K 7 HOH R 80 1180 126 HOH HOH . K 7 HOH R 81 1181 128 HOH HOH . K 7 HOH R 82 1182 130 HOH HOH . K 7 HOH R 83 1183 131 HOH HOH . K 7 HOH R 84 1184 132 HOH HOH . K 7 HOH R 85 1185 133 HOH HOH . K 7 HOH R 86 1186 137 HOH HOH . K 7 HOH R 87 1187 138 HOH HOH . K 7 HOH R 88 1188 139 HOH HOH . K 7 HOH R 89 1189 140 HOH HOH . K 7 HOH R 90 1190 141 HOH HOH . K 7 HOH R 91 1191 143 HOH HOH . K 7 HOH R 92 1192 144 HOH HOH . K 7 HOH R 93 1193 145 HOH HOH . K 7 HOH R 94 1194 148 HOH HOH . K 7 HOH R 95 1195 150 HOH HOH . K 7 HOH R 96 1196 151 HOH HOH . K 7 HOH R 97 1197 152 HOH HOH . K 7 HOH R 98 1198 155 HOH HOH . K 7 HOH R 99 1199 157 HOH HOH . K 7 HOH R 100 1200 158 HOH HOH . K 7 HOH R 101 1201 159 HOH HOH . K 7 HOH R 102 1202 161 HOH HOH . K 7 HOH R 103 1203 164 HOH HOH . K 7 HOH R 104 1204 165 HOH HOH . K 7 HOH R 105 1205 166 HOH HOH . K 7 HOH R 106 1206 167 HOH HOH . K 7 HOH R 107 1207 169 HOH HOH . K 7 HOH R 108 1208 171 HOH HOH . K 7 HOH R 109 1209 172 HOH HOH . K 7 HOH R 110 1210 173 HOH HOH . K 7 HOH R 111 1211 175 HOH HOH . K 7 HOH R 112 1212 177 HOH HOH . K 7 HOH R 113 1213 179 HOH HOH . K 7 HOH R 114 1214 180 HOH HOH . K 7 HOH R 115 1215 181 HOH HOH . K 7 HOH R 116 1216 184 HOH HOH . K 7 HOH R 117 1217 185 HOH HOH . K 7 HOH R 118 1218 187 HOH HOH . K 7 HOH R 119 1219 188 HOH HOH . K 7 HOH R 120 1220 190 HOH HOH . K 7 HOH R 121 1221 192 HOH HOH . K 7 HOH R 122 1222 193 HOH HOH . K 7 HOH R 123 1223 194 HOH HOH . K 7 HOH R 124 1224 195 HOH HOH . K 7 HOH R 125 1225 196 HOH HOH . K 7 HOH R 126 1226 197 HOH HOH . K 7 HOH R 127 1227 198 HOH HOH . K 7 HOH R 128 1228 199 HOH HOH . K 7 HOH R 129 1229 202 HOH HOH . K 7 HOH R 130 1230 206 HOH HOH . K 7 HOH R 131 1231 207 HOH HOH . K 7 HOH R 132 1232 210 HOH HOH . K 7 HOH R 133 1233 211 HOH HOH . K 7 HOH R 134 1234 215 HOH HOH . K 7 HOH R 135 1235 216 HOH HOH . K 7 HOH R 136 1236 218 HOH HOH . K 7 HOH R 137 1237 219 HOH HOH . K 7 HOH R 138 1238 222 HOH HOH . K 7 HOH R 139 1239 225 HOH HOH . K 7 HOH R 140 1240 226 HOH HOH . K 7 HOH R 141 1241 227 HOH HOH . K 7 HOH R 142 1242 228 HOH HOH . K 7 HOH R 143 1243 229 HOH HOH . K 7 HOH R 144 1244 231 HOH HOH . K 7 HOH R 145 1245 233 HOH HOH . K 7 HOH R 146 1246 236 HOH HOH . K 7 HOH R 147 1247 237 HOH HOH . K 7 HOH R 148 1248 238 HOH HOH . K 7 HOH R 149 1249 239 HOH HOH . K 7 HOH R 150 1250 241 HOH HOH . K 7 HOH R 151 1251 243 HOH HOH . K 7 HOH R 152 1252 244 HOH HOH . K 7 HOH R 153 1253 245 HOH HOH . K 7 HOH R 154 1254 249 HOH HOH . K 7 HOH R 155 1255 250 HOH HOH . K 7 HOH R 156 1256 252 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 41.852 _atom_site.Cartn_y 45.923 _atom_site.Cartn_z 56.82 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id R _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #