data_4G2V # _model_server_result.job_id WOvOVQUgwfanG-d7AT-S9g _model_server_result.datetime_utc '2024-11-12 20:43:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g2v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4G2V # _exptl.entry_id 4G2V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4G2V _cell.length_a 93.835 _cell.length_b 93.835 _cell.length_c 172.863 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G2V _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 L N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 161 n n C1 C2 GOL sing 162 n n C1 H11 GOL sing 163 n n C1 H12 GOL sing 164 n n O1 HO1 GOL sing 165 n n C2 O2 GOL sing 166 n n C2 C3 GOL sing 167 n n C2 H2 GOL sing 168 n n O2 HO2 GOL sing 169 n n C3 O3 GOL sing 170 n n C3 H31 GOL sing 171 n n C3 H32 GOL sing 172 n n O3 HO3 GOL sing 173 n n # _atom_sites.entry_id 4G2V _atom_sites.fract_transf_matrix[1][1] 0.010657 _atom_sites.fract_transf_matrix[1][2] 0.006153 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012306 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 401 1 GOL GOL . D 3 GOL A 1 402 2 GOL GOL . E 3 GOL A 1 403 4 GOL GOL . F 3 GOL A 1 404 5 GOL GOL . G 3 GOL A 1 405 6 GOL GOL . H 3 GOL A 1 406 7 GOL GOL . I 3 GOL A 1 407 8 GOL GOL . J 4 BTB A 1 408 1 BTB BTB . K 5 CL A 1 409 1 CL CL . L 3 GOL B 1 101 3 GOL GOL . M 6 HOH A 1 501 1 HOH HOH . M 6 HOH A 2 502 3 HOH HOH . M 6 HOH A 3 503 4 HOH HOH . M 6 HOH A 4 504 5 HOH HOH . M 6 HOH A 5 505 6 HOH HOH . M 6 HOH A 6 506 7 HOH HOH . M 6 HOH A 7 507 8 HOH HOH . M 6 HOH A 8 508 9 HOH HOH . M 6 HOH A 9 509 10 HOH HOH . M 6 HOH A 10 510 11 HOH HOH . M 6 HOH A 11 511 12 HOH HOH . M 6 HOH A 12 512 15 HOH HOH . M 6 HOH A 13 513 16 HOH HOH . M 6 HOH A 14 514 17 HOH HOH . M 6 HOH A 15 515 18 HOH HOH . M 6 HOH A 16 516 19 HOH HOH . M 6 HOH A 17 517 20 HOH HOH . M 6 HOH A 18 518 21 HOH HOH . M 6 HOH A 19 519 23 HOH HOH . M 6 HOH A 20 520 24 HOH HOH . M 6 HOH A 21 521 25 HOH HOH . M 6 HOH A 22 522 26 HOH HOH . M 6 HOH A 23 523 27 HOH HOH . M 6 HOH A 24 524 28 HOH HOH . M 6 HOH A 25 525 29 HOH HOH . M 6 HOH A 26 526 30 HOH HOH . M 6 HOH A 27 527 31 HOH HOH . M 6 HOH A 28 528 32 HOH HOH . M 6 HOH A 29 529 33 HOH HOH . M 6 HOH A 30 530 34 HOH HOH . M 6 HOH A 31 531 35 HOH HOH . M 6 HOH A 32 532 36 HOH HOH . M 6 HOH A 33 533 37 HOH HOH . M 6 HOH A 34 534 38 HOH HOH . M 6 HOH A 35 535 39 HOH HOH . M 6 HOH A 36 536 40 HOH HOH . M 6 HOH A 37 537 41 HOH HOH . M 6 HOH A 38 538 42 HOH HOH . M 6 HOH A 39 539 43 HOH HOH . M 6 HOH A 40 540 44 HOH HOH . M 6 HOH A 41 541 45 HOH HOH . M 6 HOH A 42 542 46 HOH HOH . M 6 HOH A 43 543 47 HOH HOH . M 6 HOH A 44 544 48 HOH HOH . M 6 HOH A 45 545 49 HOH HOH . M 6 HOH A 46 546 50 HOH HOH . M 6 HOH A 47 547 51 HOH HOH . M 6 HOH A 48 548 52 HOH HOH . M 6 HOH A 49 549 54 HOH HOH . M 6 HOH A 50 550 55 HOH HOH . M 6 HOH A 51 551 56 HOH HOH . M 6 HOH A 52 552 57 HOH HOH . M 6 HOH A 53 553 58 HOH HOH . M 6 HOH A 54 554 59 HOH HOH . M 6 HOH A 55 555 60 HOH HOH . M 6 HOH A 56 556 61 HOH HOH . M 6 HOH A 57 557 62 HOH HOH . M 6 HOH A 58 558 63 HOH HOH . M 6 HOH A 59 559 64 HOH HOH . M 6 HOH A 60 560 65 HOH HOH . M 6 HOH A 61 561 66 HOH HOH . M 6 HOH A 62 562 67 HOH HOH . M 6 HOH A 63 563 68 HOH HOH . M 6 HOH A 64 564 69 HOH HOH . M 6 HOH A 65 565 71 HOH HOH . M 6 HOH A 66 566 72 HOH HOH . M 6 HOH A 67 567 73 HOH HOH . M 6 HOH A 68 568 75 HOH HOH . M 6 HOH A 69 569 76 HOH HOH . M 6 HOH A 70 570 77 HOH HOH . M 6 HOH A 71 571 78 HOH HOH . M 6 HOH A 72 572 79 HOH HOH . M 6 HOH A 73 573 80 HOH HOH . M 6 HOH A 74 574 81 HOH HOH . M 6 HOH A 75 575 82 HOH HOH . M 6 HOH A 76 576 83 HOH HOH . M 6 HOH A 77 577 84 HOH HOH . M 6 HOH A 78 578 85 HOH HOH . N 6 HOH B 1 201 2 HOH HOH . N 6 HOH B 2 202 13 HOH HOH . N 6 HOH B 3 203 14 HOH HOH . N 6 HOH B 4 204 22 HOH HOH . N 6 HOH B 5 205 53 HOH HOH . N 6 HOH B 6 206 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 8.808 -12.819 -13.116 1 40.57 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . C 3 8.61 -12.345 -11.803 1 31.93 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . C 3 8.144 -11.873 -14.111 1 46.47 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . C 3 6.742 -11.923 -13.978 1 50.24 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . C 3 8.55 -12.257 -15.531 1 61.81 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . C 3 8.267 -13.619 -15.764 1 70.27 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #