data_4G36
#
_model_server_result.job_id            46MdKDRzqlXqgRXQT7KZ8A 
_model_server_result.datetime_utc      '2024-12-24 03:42:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4g36 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    4G36 
#
_exptl.entry_id    4G36 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              606.611 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4G36 
_cell.length_a            93.04 
_cell.length_b            93.04 
_cell.length_c            297.62 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4G36 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H18 N8 O8 S3' 
_chem_comp.formula_weight    606.611 
_chem_comp.id                SLU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O39 C16 SLU doub 290 n n 
C16 C14 SLU sing 291 n n 
C16 N40 SLU sing 292 n n 
C14 N15 SLU sing 293 n y 
C14 C13 SLU doub 294 n y 
N15 C11 SLU doub 295 n y 
C13 S12 SLU sing 296 n y 
C13 H13 SLU sing 297 n n 
S12 C11 SLU sing 298 n y 
C11 C8 SLU sing 299 n y 
C8 S9 SLU sing 300 n y 
C8 N7 SLU doub 301 n y 
S9 C4 SLU sing 302 n y 
C4 C5 SLU sing 303 n y 
C4 C3 SLU doub 304 n y 
C5 C6 SLU doub 305 n y 
C5 H5 SLU sing 306 n n 
C6 O10 SLU sing 307 n n 
C6 C1 SLU sing 308 n y 
O10 H10 SLU sing 309 n n 
C3 N7 SLU sing 310 n y 
C3 C2 SLU sing 311 n y 
C2 C1 SLU doub 312 n y 
C2 H2 SLU sing 313 n n 
C1 H1 SLU sing 314 n n 
N40 S17 SLU sing 315 n n 
N40 H40 SLU sing 316 n n 
S17 O18 SLU doub 317 n n 
S17 O19 SLU doub 318 n n 
S17 O20 SLU sing 319 n n 
O20 C21 SLU sing 320 n n 
C21 C22 SLU sing 321 n n 
C21 H211 SLU sing 322 n n 
C21 H212 SLU sing 323 n n 
C22 C23 SLU sing 324 n n 
C22 O26 SLU sing 325 n n 
C22 H22 SLU sing 326 n n 
C23 O27 SLU sing 327 n n 
C23 C24 SLU sing 328 n n 
C23 H23 SLU sing 329 n n 
O27 H27 SLU sing 330 n n 
C24 O28 SLU sing 331 n n 
C24 C25 SLU sing 332 n n 
C24 H24 SLU sing 333 n n 
O28 H28 SLU sing 334 n n 
C25 O26 SLU sing 335 n n 
C25 N35 SLU sing 336 n n 
C25 H25 SLU sing 337 n n 
N35 C32 SLU sing 338 n y 
N35 C36 SLU sing 339 n y 
C32 N31 SLU sing 340 n y 
C32 C33 SLU doub 341 n y 
N31 C30 SLU doub 342 n y 
C30 N29 SLU sing 343 n y 
C30 H30 SLU sing 344 n n 
N29 C34 SLU doub 345 n y 
C33 C34 SLU sing 346 n y 
C33 N37 SLU sing 347 n y 
C34 N38 SLU sing 348 n n 
N38 H381 SLU sing 349 n n 
N38 H382 SLU sing 350 n n 
N37 C36 SLU doub 351 n y 
C36 H36 SLU sing 352 n n 
#
_atom_sites.entry_id                     4G36 
_atom_sites.fract_transf_matrix[1][1]    0.010748 
_atom_sites.fract_transf_matrix[1][2]    0.006205 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012411 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00336 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SLU A 1 601 998 SLU SLU . 
D 2 SLU B 1 601 999 SLU SLU . 
E 3 HOH A 1 701 1 HOH HOH . 
E 3 HOH A 2 702 2 HOH HOH . 
E 3 HOH A 3 703 3 HOH HOH . 
E 3 HOH A 4 704 4 HOH HOH . 
E 3 HOH A 5 705 5 HOH HOH . 
E 3 HOH A 6 706 6 HOH HOH . 
E 3 HOH A 7 707 7 HOH HOH . 
E 3 HOH A 8 708 8 HOH HOH . 
E 3 HOH A 9 709 9 HOH HOH . 
E 3 HOH A 10 710 10 HOH HOH . 
E 3 HOH A 11 711 12 HOH HOH . 
E 3 HOH A 12 712 13 HOH HOH . 
E 3 HOH A 13 713 14 HOH HOH . 
E 3 HOH A 14 714 15 HOH HOH . 
E 3 HOH A 15 715 25 HOH HOH . 
E 3 HOH A 16 716 26 HOH HOH . 
E 3 HOH A 17 717 27 HOH HOH . 
E 3 HOH A 18 718 28 HOH HOH . 
E 3 HOH A 19 719 29 HOH HOH . 
E 3 HOH A 20 720 30 HOH HOH . 
E 3 HOH A 21 721 31 HOH HOH . 
E 3 HOH A 22 722 35 HOH HOH . 
E 3 HOH A 23 723 36 HOH HOH . 
E 3 HOH A 24 724 37 HOH HOH . 
E 3 HOH A 25 725 38 HOH HOH . 
E 3 HOH A 26 726 39 HOH HOH . 
E 3 HOH A 27 727 40 HOH HOH . 
E 3 HOH A 28 728 41 HOH HOH . 
E 3 HOH A 29 729 42 HOH HOH . 
E 3 HOH A 30 730 43 HOH HOH . 
E 3 HOH A 31 731 44 HOH HOH . 
E 3 HOH A 32 732 45 HOH HOH . 
E 3 HOH A 33 733 46 HOH HOH . 
E 3 HOH A 34 734 47 HOH HOH . 
E 3 HOH A 35 735 48 HOH HOH . 
E 3 HOH A 36 736 49 HOH HOH . 
E 3 HOH A 37 737 50 HOH HOH . 
E 3 HOH A 38 738 52 HOH HOH . 
E 3 HOH A 39 739 53 HOH HOH . 
E 3 HOH A 40 740 54 HOH HOH . 
E 3 HOH A 41 741 55 HOH HOH . 
E 3 HOH A 42 742 56 HOH HOH . 
E 3 HOH A 43 743 57 HOH HOH . 
E 3 HOH A 44 744 58 HOH HOH . 
E 3 HOH A 45 745 59 HOH HOH . 
E 3 HOH A 46 746 60 HOH HOH . 
F 3 HOH B 1 701 11 HOH HOH . 
F 3 HOH B 2 702 16 HOH HOH . 
F 3 HOH B 3 703 17 HOH HOH . 
F 3 HOH B 4 704 18 HOH HOH . 
F 3 HOH B 5 705 19 HOH HOH . 
F 3 HOH B 6 706 20 HOH HOH . 
F 3 HOH B 7 707 21 HOH HOH . 
F 3 HOH B 8 708 22 HOH HOH . 
F 3 HOH B 9 709 23 HOH HOH . 
F 3 HOH B 10 710 24 HOH HOH . 
F 3 HOH B 11 711 32 HOH HOH . 
F 3 HOH B 12 712 33 HOH HOH . 
F 3 HOH B 13 713 34 HOH HOH . 
F 3 HOH B 14 714 51 HOH HOH . 
F 3 HOH B 15 715 61 HOH HOH . 
F 3 HOH B 16 716 62 HOH HOH . 
F 3 HOH B 17 717 63 HOH HOH . 
F 3 HOH B 18 718 64 HOH HOH . 
F 3 HOH B 19 719 65 HOH HOH . 
F 3 HOH B 20 720 66 HOH HOH . 
F 3 HOH B 21 721 67 HOH HOH . 
F 3 HOH B 22 722 68 HOH HOH . 
F 3 HOH B 23 723 69 HOH HOH . 
F 3 HOH B 24 724 70 HOH HOH . 
F 3 HOH B 25 725 71 HOH HOH . 
F 3 HOH B 26 726 72 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O39 SLU . . . D 2 -55.593 30.664 -56.965 1 30.52 ? O39 SLU 601 B 1 
HETATM 2 C C16 SLU . . . D 2 -55.554 29.44 -56.997 1 27.82 ? C16 SLU 601 B 1 
HETATM 3 C C14 SLU . . . D 2 -55.449 28.659 -55.741 1 26.33 ? C14 SLU 601 B 1 
HETATM 4 N N15 SLU . . . D 2 -55.114 29.242 -54.629 1 26.85 ? N15 SLU 601 B 1 
HETATM 5 C C13 SLU . . . D 2 -55.72 27.326 -55.771 1 26.76 ? C13 SLU 601 B 1 
HETATM 6 S S12 SLU . . . D 2 -55.456 26.888 -54.104 1 21.34 ? S12 SLU 601 B 1 
HETATM 7 C C11 SLU . . . D 2 -55.035 28.474 -53.552 1 27.09 ? C11 SLU 601 B 1 
HETATM 8 C C8 SLU . . . D 2 -54.7 28.866 -52.272 1 25.21 ? C8 SLU 601 B 1 
HETATM 9 S S9 SLU . . . D 2 -53.857 30.322 -51.854 1 23.76 ? S9 SLU 601 B 1 
HETATM 10 C C4 SLU . . . D 2 -53.877 30.01 -50.117 1 27.14 ? C4 SLU 601 B 1 
HETATM 11 C C5 SLU . . . D 2 -53.407 30.712 -48.993 1 27.05 ? C5 SLU 601 B 1 
HETATM 12 C C6 SLU . . . D 2 -53.595 30.185 -47.735 1 26.65 ? C6 SLU 601 B 1 
HETATM 13 O O10 SLU . . . D 2 -53.121 30.874 -46.621 1 35.87 ? O10 SLU 601 B 1 
HETATM 14 C C3 SLU . . . D 2 -54.554 28.79 -50.009 1 28.72 ? C3 SLU 601 B 1 
HETATM 15 N N7 SLU . . . D 2 -54.944 28.253 -51.138 1 24.32 ? N7 SLU 601 B 1 
HETATM 16 C C2 SLU . . . D 2 -54.723 28.281 -48.695 1 27.51 ? C2 SLU 601 B 1 
HETATM 17 C C1 SLU . . . D 2 -54.248 28.982 -47.59 1 25.94 ? C1 SLU 601 B 1 
HETATM 18 N N40 SLU . . . D 2 -55.573 28.636 -58.216 1 25.79 ? N40 SLU 601 B 1 
HETATM 19 S S17 SLU . . . D 2 -55.732 29.346 -59.693 1 26.98 ? S17 SLU 601 B 1 
HETATM 20 O O18 SLU . . . D 2 -57.031 29.981 -59.668 1 27.06 ? O18 SLU 601 B 1 
HETATM 21 O O19 SLU . . . D 2 -55.848 28.374 -60.763 1 25.47 ? O19 SLU 601 B 1 
HETATM 22 O O20 SLU . . . D 2 -54.686 30.399 -59.969 1 30.57 ? O20 SLU 601 B 1 
HETATM 23 C C21 SLU . . . D 2 -53.348 30.264 -59.561 1 27.74 ? C21 SLU 601 B 1 
HETATM 24 C C22 SLU . . . D 2 -52.651 31.551 -59.925 1 23.66 ? C22 SLU 601 B 1 
HETATM 25 C C23 SLU . . . D 2 -51.187 31.487 -59.715 1 28.5 ? C23 SLU 601 B 1 
HETATM 26 O O27 SLU . . . D 2 -50.483 30.994 -60.805 1 28.14 ? O27 SLU 601 B 1 
HETATM 27 C C24 SLU . . . D 2 -50.858 32.881 -59.411 1 28.3 ? C24 SLU 601 B 1 
HETATM 28 O O28 SLU . . . D 2 -50.791 33.697 -60.514 1 28.03 ? O28 SLU 601 B 1 
HETATM 29 C C25 SLU . . . D 2 -52.053 33.276 -58.648 1 25.03 ? C25 SLU 601 B 1 
HETATM 30 O O26 SLU . . . D 2 -53.171 32.52 -59.074 1 25.53 ? O26 SLU 601 B 1 
HETATM 31 N N35 SLU . . . D 2 -51.859 33.189 -57.224 1 27.78 ? N35 SLU 601 B 1 
HETATM 32 C C32 SLU . . . D 2 -51.073 34.05 -56.533 1 30.26 ? C32 SLU 601 B 1 
HETATM 33 N N31 SLU . . . D 2 -50.31 35.107 -56.909 1 27.65 ? N31 SLU 601 B 1 
HETATM 34 C C30 SLU . . . D 2 -49.625 35.791 -55.995 1 29.31 ? C30 SLU 601 B 1 
HETATM 35 N N29 SLU . . . D 2 -49.665 35.46 -54.693 1 35.71 ? N29 SLU 601 B 1 
HETATM 36 C C33 SLU . . . D 2 -51.152 33.652 -55.164 1 27.53 ? C33 SLU 601 B 1 
HETATM 37 C C34 SLU . . . D 2 -50.402 34.417 -54.226 1 29.3 ? C34 SLU 601 B 1 
HETATM 38 N N38 SLU . . . D 2 -50.414 34.117 -52.805 1 29.27 ? N38 SLU 601 B 1 
HETATM 39 N N37 SLU . . . D 2 -51.97 32.606 -55.106 1 24.02 ? N37 SLU 601 B 1 
HETATM 40 C C36 SLU . . . D 2 -52.395 32.322 -56.332 1 25.8 ? C36 SLU 601 B 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          21 
_model_server_stats.element_count           40 
#