data_4G5J # _model_server_result.job_id 78YnJywbIMqH_gTQnR9vwQ _model_server_result.datetime_utc '2024-11-23 12:39:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g5j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 4G5J # _exptl.entry_id 4G5J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 487.954 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)butanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4G5J _cell.length_a 144.468 _cell.length_b 144.468 _cell.length_c 144.468 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 144.468 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 105 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 797 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C30 _struct_conn.ptnr2_label_comp_id 0WN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 0WN _struct_conn.ptnr2_auth_seq_id 1101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.841 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H27 Cl F N5 O3' _chem_comp.formula_weight 487.954 _chem_comp.id 0WN _chem_comp.mon_nstd_flag . _chem_comp.name N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)butanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Afatinib, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F18 C13 0WN sing 63 n n C13 C15 0WN doub 64 n y C13 C12 0WN sing 65 n y CL1 C12 0WN sing 66 n n C15 C17 0WN sing 67 n y C12 C14 0WN doub 68 n y C17 C16 0WN doub 69 n y C14 C16 0WN sing 70 n y C16 N11 0WN sing 71 n n N11 C4 0WN sing 72 n n N2 C4 0WN doub 73 n y N2 C1 0WN sing 74 n y C4 C6 0WN sing 75 n y C1 N3 0WN doub 76 n y C6 C8 0WN doub 77 n y C6 C5 0WN sing 78 n y C33 N32 0WN sing 79 n n C8 C7 0WN sing 80 n y N3 C5 0WN sing 81 n y C5 C10 0WN doub 82 n y O29 C27 0WN doub 83 n n N32 C34 0WN sing 84 n n N32 C31 0WN sing 85 n n C7 N26 0WN sing 86 n n C7 C9 0WN doub 87 n y C10 C9 0WN sing 88 n y C27 N26 0WN sing 89 n n C27 C28 0WN sing 90 n n C9 O20 0WN sing 91 n n C31 C30 0WN sing 92 n n C30 C28 0WN sing 93 n n O20 C21 0WN sing 94 n n C22 C21 0WN sing 95 n n C22 O23 0WN sing 96 n n C21 C25 0WN sing 97 n n O23 C24 0WN sing 98 n n C25 C24 0WN sing 99 n n C1 H1 0WN sing 100 n n C8 H2 0WN sing 101 n n C10 H3 0WN sing 102 n n N11 H4 0WN sing 103 n n C14 H5 0WN sing 104 n n C15 H6 0WN sing 105 n n C17 H7 0WN sing 106 n n C21 H8 0WN sing 107 n n C22 H9 0WN sing 108 n n C22 H10 0WN sing 109 n n C24 H11 0WN sing 110 n n C24 H12 0WN sing 111 n n C25 H13 0WN sing 112 n n C25 H14 0WN sing 113 n n N26 H15 0WN sing 114 n n C28 H16 0WN sing 115 n n C28 H17 0WN sing 116 n n C30 H18 0WN sing 117 n n C30 H19 0WN sing 118 n n C31 H20 0WN sing 119 n n C31 H21 0WN sing 120 n n C33 H23 0WN sing 121 n n C33 H24 0WN sing 122 n n C33 H25 0WN sing 123 n n C34 H26 0WN sing 124 n n C34 H27 0WN sing 125 n n C34 H28 0WN sing 126 n n # _atom_sites.entry_id 4G5J _atom_sites.fract_transf_matrix[1][1] 0.006922 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0WN A 1 1101 1 0WN 0WM . C 3 0WM A 1 1102 1 0WM 0WM . D 3 0WM A 1 1103 2 0WM 0WM . E 4 HOH A 1 1201 1 HOH HOH . E 4 HOH A 2 1202 2 HOH HOH . E 4 HOH A 3 1203 3 HOH HOH . E 4 HOH A 4 1204 4 HOH HOH . E 4 HOH A 5 1205 5 HOH HOH . E 4 HOH A 6 1206 6 HOH HOH . E 4 HOH A 7 1207 7 HOH HOH . E 4 HOH A 8 1208 8 HOH HOH . E 4 HOH A 9 1209 9 HOH HOH . E 4 HOH A 10 1210 10 HOH HOH . E 4 HOH A 11 1211 11 HOH HOH . E 4 HOH A 12 1212 12 HOH HOH . E 4 HOH A 13 1213 13 HOH HOH . E 4 HOH A 14 1214 14 HOH HOH . E 4 HOH A 15 1215 15 HOH HOH . E 4 HOH A 16 1216 16 HOH HOH . E 4 HOH A 17 1217 17 HOH HOH . E 4 HOH A 18 1218 18 HOH HOH . E 4 HOH A 19 1219 19 HOH HOH . E 4 HOH A 20 1220 20 HOH HOH . E 4 HOH A 21 1221 21 HOH HOH . E 4 HOH A 22 1222 22 HOH HOH . E 4 HOH A 23 1223 23 HOH HOH . E 4 HOH A 24 1224 24 HOH HOH . E 4 HOH A 25 1225 25 HOH HOH . E 4 HOH A 26 1226 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 0WN . . . B 2 53.179 -1.616 -21.729 1 154.14 ? C1 0WN 1101 A 1 HETATM 2 N N2 0WN . . . B 2 52.841 -0.626 -22.609 1 148.63 ? N2 0WN 1101 A 1 HETATM 3 N N3 0WN . . . B 2 52.705 -1.567 -20.443 1 159.5 ? N3 0WN 1101 A 1 HETATM 4 C C4 0WN . . . B 2 52.03 0.428 -22.238 1 157.5 ? C4 0WN 1101 A 1 HETATM 5 C C5 0WN . . . B 2 51.903 -0.523 -20.053 1 162.9 ? C5 0WN 1101 A 1 HETATM 6 C C6 0WN . . . B 2 51.541 0.5 -20.927 1 164.97 ? C6 0WN 1101 A 1 HETATM 7 C C7 0WN . . . B 2 50.245 1.523 -19.135 1 173.07 ? C7 0WN 1101 A 1 HETATM 8 C C8 0WN . . . B 2 50.709 1.535 -20.453 1 168.63 ? C8 0WN 1101 A 1 HETATM 9 C C9 0WN . . . B 2 50.649 0.493 -18.285 1 172.33 ? C9 0WN 1101 A 1 HETATM 10 C C10 0WN . . . B 2 51.466 -0.523 -18.756 1 167.1 ? C10 0WN 1101 A 1 HETATM 11 N N11 0WN . . . B 2 51.626 1.325 -23.267 1 158.62 ? N11 0WN 1101 A 1 HETATM 12 C C12 0WN . . . B 2 51.771 -0.562 -26.542 1 161.08 ? C12 0WN 1101 A 1 HETATM 13 C C13 0WN . . . B 2 51.725 0.522 -27.405 1 155.16 ? C13 0WN 1101 A 1 HETATM 14 C C14 0WN . . . B 2 51.699 -0.342 -25.166 1 161.37 ? C14 0WN 1101 A 1 HETATM 15 C C15 0WN . . . B 2 51.609 1.813 -26.914 1 151.87 ? C15 0WN 1101 A 1 HETATM 16 C C16 0WN . . . B 2 51.59 0.965 -24.656 1 158.07 ? C16 0WN 1101 A 1 HETATM 17 C C17 0WN . . . B 2 51.543 2.03 -25.551 1 152.29 ? C17 0WN 1101 A 1 HETATM 18 F F18 0WN . . . B 2 51.788 0.322 -28.712 1 157.96 ? F18 0WN 1101 A 1 HETATM 19 CL CL1 0WN . . . B 2 51.905 -2.162 -27.204 1 163.8 ? CL1 0WN 1101 A 1 HETATM 20 O O20 0WN . . . B 2 50.214 0.487 -16.992 1 181.59 ? O20 0WN 1101 A 1 HETATM 21 C C21 0WN . . . B 2 50.725 -0.345 -15.942 1 185.13 ? C21 0WN 1101 A 1 HETATM 22 C C22 0WN . . . B 2 50.327 -1.827 -16.047 1 188.69 ? C22 0WN 1101 A 1 HETATM 23 O O23 0WN . . . B 2 49.723 -2.243 -14.826 1 198.07 ? O23 0WN 1101 A 1 HETATM 24 C C24 0WN . . . B 2 49.197 -1.053 -14.252 1 204.19 ? C24 0WN 1101 A 1 HETATM 25 C C25 0WN . . . B 2 50.146 0.072 -14.615 1 194.27 ? C25 0WN 1101 A 1 HETATM 26 N N26 0WN . . . B 2 49.457 2.563 -18.547 1 181.02 ? N26 0WN 1101 A 1 HETATM 27 C C27 0WN . . . B 2 49.568 3.957 -18.748 1 182.15 ? C27 0WN 1101 A 1 HETATM 28 C C28 0WN . . . B 2 48.675 4.884 -17.968 1 188.16 ? C28 0WN 1101 A 1 HETATM 29 O O29 0WN . . . B 2 50.361 4.417 -19.549 1 171.63 ? O29 0WN 1101 A 1 HETATM 30 C C30 0WN . . . B 2 49.026 6.397 -18.154 1 188.32 ? C30 0WN 1101 A 1 HETATM 31 C C31 0WN . . . B 2 47.902 7.464 -18.167 1 200.74 ? C31 0WN 1101 A 1 HETATM 32 N N32 0WN . . . B 2 47.949 8.415 -19.312 1 204.19 ? N32 0WN 1101 A 1 HETATM 33 C C33 0WN . . . B 2 47.478 7.801 -20.584 1 202.2 ? C33 0WN 1101 A 1 HETATM 34 C C34 0WN . . . B 2 47.187 9.659 -19.029 1 213.36 ? C34 0WN 1101 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #