data_4G5J # _model_server_result.job_id ZauzyS6xefs4hjDQxzYIlw _model_server_result.datetime_utc '2024-11-23 12:24:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g5j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1102}' # _entry.id 4G5J # _exptl.entry_id 4G5J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 485.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4G5J _cell.length_a 144.468 _cell.length_b 144.468 _cell.length_c 144.468 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 144.468 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 105 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 797 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C30 _struct_conn.ptnr2_label_comp_id 0WN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 0WN _struct_conn.ptnr2_auth_seq_id 1101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.841 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H25 Cl F N5 O3' _chem_comp.formula_weight 485.938 _chem_comp.id 0WM _chem_comp.mon_nstd_flag . _chem_comp.name (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Afatinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 0WM doub 1 n y C1 N3 0WM sing 2 n y C1 H1 0WM sing 3 n n N2 C4 0WM sing 4 n y N3 C5 0WM doub 5 n y C4 N11 0WM sing 6 n n C4 C6 0WM doub 7 n y C5 C6 0WM sing 8 n y C5 C10 0WM sing 9 n y C6 C8 0WM sing 10 n y C8 C7 0WM doub 11 n y C7 C9 0WM sing 12 n y C7 N26 0WM sing 13 n n C8 H8 0WM sing 14 n n C10 C9 0WM doub 15 n y C9 O20 0WM sing 16 n n C10 H10 0WM sing 17 n n N11 C16 0WM sing 18 n n N11 HN11 0WM sing 19 n n C13 C12 0WM doub 20 n y C14 C12 0WM sing 21 n y C12 CL1 0WM sing 22 n n C15 C13 0WM sing 23 n y C13 F18 0WM sing 24 n n C16 C14 0WM doub 25 n y C14 H14 0WM sing 26 n n C17 C15 0WM doub 27 n y C15 H15 0WM sing 28 n n C17 C16 0WM sing 29 n y C17 H17 0WM sing 30 n n O20 C21 0WM sing 31 n n C21 C22 0WM sing 32 n n C21 C25 0WM sing 33 n n C21 H21 0WM sing 34 n n C22 O23 0WM sing 35 n n C22 H22 0WM sing 36 n n C22 H22A 0WM sing 37 n n O23 C24 0WM sing 38 n n C25 C24 0WM sing 39 n n C24 H24 0WM sing 40 n n C24 H24A 0WM sing 41 n n C25 H25 0WM sing 42 n n C25 H25A 0WM sing 43 n n N26 C27 0WM sing 44 n n N26 HN26 0WM sing 45 n n O29 C27 0WM doub 46 n n C27 C28 0WM sing 47 n n C28 C30 0WM doub 48 e n C28 H28 0WM sing 49 n n C30 C31 0WM sing 50 n n C30 H30 0WM sing 51 n n N32 C31 0WM sing 52 n n C31 H31 0WM sing 53 n n C31 H31A 0WM sing 54 n n C33 N32 0WM sing 55 n n C34 N32 0WM sing 56 n n C33 H33 0WM sing 57 n n C33 H33A 0WM sing 58 n n C33 H33B 0WM sing 59 n n C34 H34 0WM sing 60 n n C34 H34A 0WM sing 61 n n C34 H34B 0WM sing 62 n n # _atom_sites.entry_id 4G5J _atom_sites.fract_transf_matrix[1][1] 0.006922 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0WN A 1 1101 1 0WN 0WM . C 3 0WM A 1 1102 1 0WM 0WM . D 3 0WM A 1 1103 2 0WM 0WM . E 4 HOH A 1 1201 1 HOH HOH . E 4 HOH A 2 1202 2 HOH HOH . E 4 HOH A 3 1203 3 HOH HOH . E 4 HOH A 4 1204 4 HOH HOH . E 4 HOH A 5 1205 5 HOH HOH . E 4 HOH A 6 1206 6 HOH HOH . E 4 HOH A 7 1207 7 HOH HOH . E 4 HOH A 8 1208 8 HOH HOH . E 4 HOH A 9 1209 9 HOH HOH . E 4 HOH A 10 1210 10 HOH HOH . E 4 HOH A 11 1211 11 HOH HOH . E 4 HOH A 12 1212 12 HOH HOH . E 4 HOH A 13 1213 13 HOH HOH . E 4 HOH A 14 1214 14 HOH HOH . E 4 HOH A 15 1215 15 HOH HOH . E 4 HOH A 16 1216 16 HOH HOH . E 4 HOH A 17 1217 17 HOH HOH . E 4 HOH A 18 1218 18 HOH HOH . E 4 HOH A 19 1219 19 HOH HOH . E 4 HOH A 20 1220 20 HOH HOH . E 4 HOH A 21 1221 21 HOH HOH . E 4 HOH A 22 1222 22 HOH HOH . E 4 HOH A 23 1223 23 HOH HOH . E 4 HOH A 24 1224 24 HOH HOH . E 4 HOH A 25 1225 25 HOH HOH . E 4 HOH A 26 1226 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 0WM . . . C 3 59.274 -5.56 -5.435 1 167.82 ? C1 0WM 1102 A 1 HETATM 2 N N2 0WM . . . C 3 60.565 -5.101 -5.454 1 157.47 ? N2 0WM 1102 A 1 HETATM 3 N N3 0WM . . . C 3 58.253 -4.642 -5.372 1 173.48 ? N3 0WM 1102 A 1 HETATM 4 C C4 0WM . . . C 3 60.864 -3.758 -5.41 1 150.96 ? C4 0WM 1102 A 1 HETATM 5 C C5 0WM . . . C 3 58.523 -3.29 -5.328 1 165.96 ? C5 0WM 1102 A 1 HETATM 6 C C6 0WM . . . C 3 59.833 -2.818 -5.347 1 156.68 ? C6 0WM 1102 A 1 HETATM 7 C C7 0WM . . . C 3 58.96 -0.565 -5.249 1 160.55 ? C7 0WM 1102 A 1 HETATM 8 C C8 0WM . . . C 3 60.046 -1.435 -5.306 1 153.79 ? C8 0WM 1102 A 1 HETATM 9 C C9 0WM . . . C 3 57.661 -1.051 -5.228 1 170.2 ? C9 0WM 1102 A 1 HETATM 10 C C10 0WM . . . C 3 57.447 -2.422 -5.268 1 172.41 ? C10 0WM 1102 A 1 HETATM 11 N N11 0WM . . . C 3 62.228 -3.389 -5.458 1 145.03 ? N11 0WM 1102 A 1 HETATM 12 C C12 0WM . . . C 3 64.374 -6.441 -5.959 1 142.41 ? C12 0WM 1102 A 1 HETATM 13 C C13 0WM . . . C 3 65.605 -5.827 -6.046 1 133.3 ? C13 0WM 1102 A 1 HETATM 14 C C14 0WM . . . C 3 63.233 -5.681 -5.766 1 146.64 ? C14 0WM 1102 A 1 HETATM 15 C C15 0WM . . . C 3 65.708 -4.456 -5.938 1 130.36 ? C15 0WM 1102 A 1 HETATM 16 C C16 0WM . . . C 3 63.319 -4.288 -5.656 1 141.31 ? C16 0WM 1102 A 1 HETATM 17 C C17 0WM . . . C 3 64.571 -3.695 -5.748 1 135.39 ? C17 0WM 1102 A 1 HETATM 18 F F18 0WM . . . C 3 66.692 -6.551 -6.23 1 132.33 ? F18 0WM 1102 A 1 HETATM 19 CL CL1 0WM . . . C 3 64.27 -8.154 -6.093 1 149.27 ? CL1 0WM 1102 A 1 HETATM 20 O O20 0WM . . . C 3 56.652 -0.123 -5.169 1 178.7 ? O20 0WM 1102 A 1 HETATM 21 C C21 0WM . . . C 3 55.249 -0.347 -5.324 1 194.33 ? C21 0WM 1102 A 1 HETATM 22 C C22 0WM . . . C 3 54.51 0.958 -5.642 1 198.27 ? C22 0WM 1102 A 1 HETATM 23 O O23 0WM . . . C 3 54.205 1.592 -4.398 1 206.62 ? O23 0WM 1102 A 1 HETATM 24 C C24 0WM . . . C 3 53.979 0.527 -3.479 1 213.68 ? C24 0WM 1102 A 1 HETATM 25 C C25 0WM . . . C 3 54.585 -0.752 -4.038 1 205.93 ? C25 0WM 1102 A 1 HETATM 26 N N26 0WM . . . C 3 59.056 0.847 -5.211 1 157.15 ? N26 0WM 1102 A 1 HETATM 27 C C27 0WM . . . C 3 60.117 1.741 -5.255 1 156.15 ? C27 0WM 1102 A 1 HETATM 28 C C28 0WM . . . C 3 59.635 3.139 -5.177 1 162.13 ? C28 0WM 1102 A 1 HETATM 29 O O29 0WM . . . C 3 61.294 1.444 -5.324 1 144 ? O29 0WM 1102 A 1 HETATM 30 C C30 0WM . . . C 3 60.413 4.225 -5.132 1 160.84 ? C30 0WM 1102 A 1 HETATM 31 C C31 0WM . . . C 3 59.642 5.536 -5.033 1 169.44 ? C31 0WM 1102 A 1 HETATM 32 N N32 0WM . . . C 3 60.291 6.665 -5.702 1 171.25 ? N32 0WM 1102 A 1 HETATM 33 C C33 0WM . . . C 3 60.652 6.328 -7.093 1 165.61 ? C33 0WM 1102 A 1 HETATM 34 C C34 0WM . . . C 3 59.368 7.806 -5.718 1 180.89 ? C34 0WM 1102 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #