data_4G79 # _model_server_result.job_id 1vjgDod1CFahTepa6UAI6g _model_server_result.datetime_utc '2024-10-18 16:29:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g79 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 4G79 # _exptl.entry_id 4G79 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4G79 _cell.length_a 69.33 _cell.length_b 73.37 _cell.length_c 79.33 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_554 x,-y,-z-1 1 0 0 0 -1 0 0 0 -1 0 0 -79.33 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 100 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 102 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 100 _struct_conn.ptnr2_symmetry 2_455 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.59 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 4G79 _atom_sites.fract_transf_matrix[1][1] 0.014424 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 1 GOL GOL . C 2 GOL A 1 202 1 GOL GOL . D 2 GOL A 1 203 1 GOL GOL . E 2 GOL A 1 204 1 GOL GOL . F 3 PG4 A 1 205 1 PG4 PG4 . G 3 PG4 A 1 206 1 PG4 PG4 . H 4 HOH A 1 301 1 HOH HOH . H 4 HOH A 2 302 8 HOH HOH . H 4 HOH A 3 303 9 HOH HOH . H 4 HOH A 4 304 10 HOH HOH . H 4 HOH A 5 305 11 HOH HOH . H 4 HOH A 6 306 12 HOH HOH . H 4 HOH A 7 307 1 HOH HOH . H 4 HOH A 8 308 2 HOH HOH . H 4 HOH A 9 309 3 HOH HOH . H 4 HOH A 10 310 4 HOH HOH . H 4 HOH A 11 311 5 HOH HOH . H 4 HOH A 12 312 6 HOH HOH . H 4 HOH A 13 313 7 HOH HOH . H 4 HOH A 14 314 1 HOH HOH . H 4 HOH A 15 315 4 HOH HOH . H 4 HOH A 16 316 3 HOH HOH . H 4 HOH A 17 317 4 HOH HOH . H 4 HOH A 18 318 5 HOH HOH . H 4 HOH A 19 319 6 HOH HOH . H 4 HOH A 20 320 7 HOH HOH . H 4 HOH A 21 321 8 HOH HOH . H 4 HOH A 22 322 9 HOH HOH . H 4 HOH A 23 323 10 HOH HOH . H 4 HOH A 24 324 11 HOH HOH . H 4 HOH A 25 325 12 HOH HOH . H 4 HOH A 26 326 13 HOH HOH . H 4 HOH A 27 327 14 HOH HOH . H 4 HOH A 28 328 15 HOH HOH . H 4 HOH A 29 329 16 HOH HOH . H 4 HOH A 30 330 17 HOH HOH . H 4 HOH A 31 331 18 HOH HOH . H 4 HOH A 32 332 19 HOH HOH . H 4 HOH A 33 333 20 HOH HOH . H 4 HOH A 34 334 21 HOH HOH . H 4 HOH A 35 335 22 HOH HOH . H 4 HOH A 36 336 23 HOH HOH . H 4 HOH A 37 337 24 HOH HOH . H 4 HOH A 38 338 25 HOH HOH . H 4 HOH A 39 339 26 HOH HOH . H 4 HOH A 40 340 27 HOH HOH . H 4 HOH A 41 341 28 HOH HOH . H 4 HOH A 42 342 29 HOH HOH . H 4 HOH A 43 343 30 HOH HOH . H 4 HOH A 44 344 31 HOH HOH . H 4 HOH A 45 345 32 HOH HOH . H 4 HOH A 46 346 33 HOH HOH . H 4 HOH A 47 347 34 HOH HOH . H 4 HOH A 48 348 35 HOH HOH . H 4 HOH A 49 349 36 HOH HOH . H 4 HOH A 50 350 37 HOH HOH . H 4 HOH A 51 351 38 HOH HOH . H 4 HOH A 52 352 39 HOH HOH . H 4 HOH A 53 353 40 HOH HOH . H 4 HOH A 54 354 41 HOH HOH . H 4 HOH A 55 355 42 HOH HOH . H 4 HOH A 56 356 43 HOH HOH . H 4 HOH A 57 357 44 HOH HOH . H 4 HOH A 58 358 45 HOH HOH . H 4 HOH A 59 359 46 HOH HOH . H 4 HOH A 60 360 47 HOH HOH . H 4 HOH A 61 361 48 HOH HOH . H 4 HOH A 62 362 49 HOH HOH . H 4 HOH A 63 363 50 HOH HOH . H 4 HOH A 64 364 51 HOH HOH . H 4 HOH A 65 365 52 HOH HOH . H 4 HOH A 66 366 54 HOH HOH . H 4 HOH A 67 367 55 HOH HOH . H 4 HOH A 68 368 56 HOH HOH . H 4 HOH A 69 369 57 HOH HOH . H 4 HOH A 70 370 59 HOH HOH . H 4 HOH A 71 371 60 HOH HOH . H 4 HOH A 72 372 61 HOH HOH . H 4 HOH A 73 373 62 HOH HOH . H 4 HOH A 74 374 63 HOH HOH . H 4 HOH A 75 375 64 HOH HOH . H 4 HOH A 76 376 65 HOH HOH . H 4 HOH A 77 377 66 HOH HOH . H 4 HOH A 78 378 67 HOH HOH . H 4 HOH A 79 379 68 HOH HOH . H 4 HOH A 80 380 69 HOH HOH . H 4 HOH A 81 381 70 HOH HOH . H 4 HOH A 82 382 71 HOH HOH . H 4 HOH A 83 383 72 HOH HOH . H 4 HOH A 84 384 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 -3.138 -11.21 -14.525 1 77.45 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 2 -2.498 -10.706 -15.692 1 77.77 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 2 -3.929 -12.458 -14.842 1 78.84 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 2 -4.841 -12.731 -13.775 1 79.89 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 2 -3.04 -13.658 -15.076 1 79.85 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 2 -3.781 -14.732 -15.645 1 80.85 ? O3 GOL 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #