data_4G7P # _model_server_result.job_id rz2fYdZMCb-yn2kurs4Dyg _model_server_result.datetime_utc '2024-11-13 13:00:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g7p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4G7P # _exptl.entry_id 4G7P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4G7P _cell.length_a 65.841 _cell.length_b 65.841 _cell.length_c 120.268 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 25 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 25 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 300 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.253 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 71 n n C O2 FMT sing 72 n n C H FMT sing 73 n n O2 HO2 FMT sing 74 n n # _atom_sites.entry_id 4G7P _atom_sites.fract_transf_matrix[1][1] 0.015188 _atom_sites.fract_transf_matrix[1][2] 0.008769 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017538 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 300 300 HEM HEM . C 3 CMO A 1 301 301 CMO CMO . D 4 FMT A 1 302 302 FMT FMT . E 5 HOH A 1 401 1 HOH HOH . E 5 HOH A 2 402 2 HOH HOH . E 5 HOH A 3 403 3 HOH HOH . E 5 HOH A 4 404 4 HOH HOH . E 5 HOH A 5 405 5 HOH HOH . E 5 HOH A 6 406 6 HOH HOH . E 5 HOH A 7 407 7 HOH HOH . E 5 HOH A 8 408 8 HOH HOH . E 5 HOH A 9 409 9 HOH HOH . E 5 HOH A 10 410 10 HOH HOH . E 5 HOH A 11 411 11 HOH HOH . E 5 HOH A 12 412 12 HOH HOH . E 5 HOH A 13 413 13 HOH HOH . E 5 HOH A 14 414 14 HOH HOH . E 5 HOH A 15 415 15 HOH HOH . E 5 HOH A 16 416 16 HOH HOH . E 5 HOH A 17 417 17 HOH HOH . E 5 HOH A 18 418 18 HOH HOH . E 5 HOH A 19 419 19 HOH HOH . E 5 HOH A 20 420 20 HOH HOH . E 5 HOH A 21 421 21 HOH HOH . E 5 HOH A 22 422 22 HOH HOH . E 5 HOH A 23 423 23 HOH HOH . E 5 HOH A 24 424 24 HOH HOH . E 5 HOH A 25 425 25 HOH HOH . E 5 HOH A 26 426 26 HOH HOH . E 5 HOH A 27 427 27 HOH HOH . E 5 HOH A 28 428 28 HOH HOH . E 5 HOH A 29 429 29 HOH HOH . E 5 HOH A 30 430 30 HOH HOH . E 5 HOH A 31 431 31 HOH HOH . E 5 HOH A 32 432 32 HOH HOH . E 5 HOH A 33 433 33 HOH HOH . E 5 HOH A 34 434 34 HOH HOH . E 5 HOH A 35 435 35 HOH HOH . E 5 HOH A 36 436 36 HOH HOH . E 5 HOH A 37 437 37 HOH HOH . E 5 HOH A 38 438 38 HOH HOH . E 5 HOH A 39 439 39 HOH HOH . E 5 HOH A 40 440 40 HOH HOH . E 5 HOH A 41 441 41 HOH HOH . E 5 HOH A 42 442 42 HOH HOH . E 5 HOH A 43 443 43 HOH HOH . E 5 HOH A 44 444 44 HOH HOH . E 5 HOH A 45 445 45 HOH HOH . E 5 HOH A 46 446 46 HOH HOH . E 5 HOH A 47 447 47 HOH HOH . E 5 HOH A 48 448 48 HOH HOH . E 5 HOH A 49 449 49 HOH HOH . E 5 HOH A 50 450 50 HOH HOH . E 5 HOH A 51 451 51 HOH HOH . E 5 HOH A 52 452 52 HOH HOH . E 5 HOH A 53 453 53 HOH HOH . E 5 HOH A 54 454 54 HOH HOH . E 5 HOH A 55 455 55 HOH HOH . E 5 HOH A 56 456 56 HOH HOH . E 5 HOH A 57 457 57 HOH HOH . E 5 HOH A 58 458 58 HOH HOH . E 5 HOH A 59 459 59 HOH HOH . E 5 HOH A 60 460 60 HOH HOH . E 5 HOH A 61 461 61 HOH HOH . E 5 HOH A 62 462 62 HOH HOH . E 5 HOH A 63 463 63 HOH HOH . E 5 HOH A 64 464 64 HOH HOH . E 5 HOH A 65 465 65 HOH HOH . E 5 HOH A 66 466 66 HOH HOH . E 5 HOH A 67 467 67 HOH HOH . E 5 HOH A 68 468 68 HOH HOH . E 5 HOH A 69 469 69 HOH HOH . E 5 HOH A 70 470 70 HOH HOH . E 5 HOH A 71 471 71 HOH HOH . E 5 HOH A 72 472 72 HOH HOH . E 5 HOH A 73 473 74 HOH HOH . E 5 HOH A 74 474 75 HOH HOH . E 5 HOH A 75 475 76 HOH HOH . E 5 HOH A 76 476 77 HOH HOH . E 5 HOH A 77 477 78 HOH HOH . E 5 HOH A 78 478 79 HOH HOH . E 5 HOH A 79 479 80 HOH HOH . E 5 HOH A 80 480 81 HOH HOH . E 5 HOH A 81 481 82 HOH HOH . E 5 HOH A 82 482 83 HOH HOH . E 5 HOH A 83 483 84 HOH HOH . E 5 HOH A 84 484 85 HOH HOH . E 5 HOH A 85 485 86 HOH HOH . E 5 HOH A 86 486 87 HOH HOH . E 5 HOH A 87 487 88 HOH HOH . E 5 HOH A 88 488 89 HOH HOH . E 5 HOH A 89 489 90 HOH HOH . E 5 HOH A 90 490 91 HOH HOH . E 5 HOH A 91 491 92 HOH HOH . E 5 HOH A 92 492 93 HOH HOH . E 5 HOH A 93 493 94 HOH HOH . E 5 HOH A 94 494 95 HOH HOH . E 5 HOH A 95 495 96 HOH HOH . E 5 HOH A 96 496 97 HOH HOH . E 5 HOH A 97 497 98 HOH HOH . E 5 HOH A 98 498 99 HOH HOH . E 5 HOH A 99 499 100 HOH HOH . E 5 HOH A 100 500 101 HOH HOH . E 5 HOH A 101 501 102 HOH HOH . E 5 HOH A 102 502 103 HOH HOH . E 5 HOH A 103 503 104 HOH HOH . E 5 HOH A 104 504 105 HOH HOH . E 5 HOH A 105 505 106 HOH HOH . E 5 HOH A 106 506 107 HOH HOH . E 5 HOH A 107 507 108 HOH HOH . E 5 HOH A 108 508 109 HOH HOH . E 5 HOH A 109 509 110 HOH HOH . E 5 HOH A 110 510 111 HOH HOH . E 5 HOH A 111 511 112 HOH HOH . E 5 HOH A 112 512 113 HOH HOH . E 5 HOH A 113 513 114 HOH HOH . E 5 HOH A 114 514 115 HOH HOH . E 5 HOH A 115 515 116 HOH HOH . E 5 HOH A 116 516 117 HOH HOH . E 5 HOH A 117 517 118 HOH HOH . E 5 HOH A 118 518 119 HOH HOH . E 5 HOH A 119 519 120 HOH HOH . E 5 HOH A 120 520 121 HOH HOH . E 5 HOH A 121 521 122 HOH HOH . E 5 HOH A 122 522 123 HOH HOH . E 5 HOH A 123 523 124 HOH HOH . E 5 HOH A 124 524 125 HOH HOH . E 5 HOH A 125 525 126 HOH HOH . E 5 HOH A 126 526 127 HOH HOH . E 5 HOH A 127 527 128 HOH HOH . E 5 HOH A 128 528 129 HOH HOH . E 5 HOH A 129 529 130 HOH HOH . E 5 HOH A 130 530 131 HOH HOH . E 5 HOH A 131 531 132 HOH HOH . E 5 HOH A 132 532 133 HOH HOH . E 5 HOH A 133 533 134 HOH HOH . E 5 HOH A 134 534 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 4 -41.977 22.997 -17.721 1 39.7 ? C FMT 302 A 1 HETATM 2 O O1 FMT . . . D 4 -42.358 21.97 -17.143 1 36.39 ? O1 FMT 302 A 1 HETATM 3 O O2 FMT . . . D 4 -42.009 23.03 -19.05 1 30.48 ? O2 FMT 302 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #