data_4G7R
#
_model_server_result.job_id            -lTYW927CJAFBhSivzcahA 
_model_server_result.datetime_utc      '2025-03-13 17:53:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4g7r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":608}' 
#
_entry.id    4G7R 
#
_exptl.entry_id    4G7R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    15 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          127.79 
_cell.angle_gamma         90 
_cell.entry_id            4G7R 
_cell.length_a            143.761 
_cell.length_b            98.226 
_cell.length_c            94.704 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4G7R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 H N N 
? 8 I N N 
? 8 J N N 
? 8 K N N 
? 8 L N N 
? 8 M N N 
? 8 N N N 
? 8 O N N 
? 8 P N N 
? 8 Q N N 
? 8 R N N 
? 8 T N N 
? 8 U N N 
? 8 V N N 
? 8 W N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 79 A HIS 72 1_555 E FE HEM . A HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc2 A ND1 HIS 240 A HIS 233 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
metalc ? metalc3 A NE2 HIS 289 A HIS 282 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
metalc ? metalc4 A NE2 HIS 290 A HIS 283 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc5 A NE2 HIS 391 A HIS 384 1_555 F FE HAS . A HAS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc6 A NE2 HIS 393 A HIS 386 1_555 E FE HEM . A HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc7 D CU CU . A CU 601 1_555 G O2 PER . A PER 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? 
metalc ? metalc8 F FE HAS . A HAS 603 1_555 G O1 PER . A PER 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc9 B ND1 HIS 114 B HIS 114 1_555 S CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc10 B SG CYS 149 B CYS 149 1_555 S CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc11 B SG CYS 149 B CYS 149 1_555 S CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc12 B O GLN 151 B GLN 151 1_555 S CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc13 B SG CYS 153 B CYS 153 1_555 S CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc14 B SG CYS 153 B CYS 153 1_555 S CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc15 B ND1 HIS 157 B HIS 157 1_555 S CU1 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc16 B SD MET 160 B MET 160 1_555 S CU2 CUA . B CUA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 456 n n 
C10 C9 OLC doub 457 n n 
C10 C11 OLC sing 458 n n 
C9 C8 OLC sing 459 n n 
C17 C16 OLC sing 460 z n 
C11 C12 OLC sing 461 n n 
C8 C7 OLC sing 462 n n 
C24 C22 OLC sing 463 n n 
C24 O25 OLC sing 464 n n 
C16 C15 OLC sing 465 n n 
C12 C13 OLC sing 466 n n 
C7 C6 OLC sing 467 n n 
C15 C14 OLC sing 468 n n 
C13 C14 OLC sing 469 n n 
C6 C5 OLC sing 470 n n 
C5 C4 OLC sing 471 n n 
C4 C3 OLC sing 472 n n 
C3 C2 OLC sing 473 n n 
C2 C1 OLC sing 474 n n 
C21 C22 OLC sing 475 n n 
C21 O20 OLC sing 476 n n 
C1 O19 OLC doub 477 n n 
C1 O20 OLC sing 478 n n 
C22 O23 OLC sing 479 n n 
C18 H18 OLC sing 480 n n 
C18 H18A OLC sing 481 n n 
C18 H18B OLC sing 482 n n 
C10 H10 OLC sing 483 n n 
C9 H9 OLC sing 484 n n 
C17 H17 OLC sing 485 n n 
C17 H17A OLC sing 486 n n 
C11 H11 OLC sing 487 n n 
C11 H11A OLC sing 488 n n 
C8 H8 OLC sing 489 n n 
C8 H8A OLC sing 490 n n 
C24 H24 OLC sing 491 n n 
C24 H24A OLC sing 492 n n 
C16 H16 OLC sing 493 n n 
C16 H16A OLC sing 494 n n 
C12 H12 OLC sing 495 n n 
C12 H12A OLC sing 496 n n 
C7 H7 OLC sing 497 n n 
C7 H7A OLC sing 498 n n 
C15 H15 OLC sing 499 n n 
C15 H15A OLC sing 500 n n 
C13 H13 OLC sing 501 n n 
C13 H13A OLC sing 502 n n 
C6 H6 OLC sing 503 n n 
C6 H6A OLC sing 504 n n 
C14 H14 OLC sing 505 n n 
C14 H14A OLC sing 506 n n 
C5 H5 OLC sing 507 n n 
C5 H5A OLC sing 508 n n 
C4 H4 OLC sing 509 n n 
C4 H4A OLC sing 510 n n 
C3 H3 OLC sing 511 n n 
C3 H3A OLC sing 512 n n 
C2 H2 OLC sing 513 n n 
C2 H2A OLC sing 514 n n 
C21 H21 OLC sing 515 n n 
C21 H21A OLC sing 516 n n 
C22 H22 OLC sing 517 n n 
O25 HO25 OLC sing 518 n n 
O23 HO23 OLC sing 519 n n 
#
_atom_sites.entry_id                     4G7R 
_atom_sites.fract_transf_matrix[1][1]    0.006956 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005394 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010181 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013362 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CU A 1 601 803 CU CU . 
E 5 HEM A 1 602 800 HEM HEM . 
F 6 HAS A 1 603 801 HAS HAS . 
G 7 PER A 1 604 802 PER PER . 
H 8 OLC A 1 605 1 OLC OLC . 
I 8 OLC A 1 606 3 OLC OLC . 
J 8 OLC A 1 607 4 OLC OLC . 
K 8 OLC A 1 608 8 OLC OLC . 
L 8 OLC A 1 609 9 OLC OLC . 
M 8 OLC A 1 610 10 OLC OLC . 
N 8 OLC A 1 611 11 OLC OLC . 
O 8 OLC A 1 612 13 OLC OLC . 
P 8 OLC A 1 613 14 OLC OLC . 
Q 8 OLC A 1 614 15 OLC OLC . 
R 8 OLC A 1 615 16 OLC OLC . 
S 9 CUA B 1 201 802 CUA CUA . 
T 8 OLC B 1 202 6 OLC OLC . 
U 8 OLC B 1 203 7 OLC OLC . 
V 8 OLC C 1 101 2 OLC OLC . 
W 8 OLC C 1 102 5 OLC OLC . 
X 10 HOH A 1 701 17 HOH HOH . 
X 10 HOH A 2 702 18 HOH HOH . 
X 10 HOH A 3 703 22 HOH HOH . 
X 10 HOH A 4 704 28 HOH HOH . 
X 10 HOH A 5 705 33 HOH HOH . 
X 10 HOH A 6 706 39 HOH HOH . 
X 10 HOH A 7 707 41 HOH HOH . 
X 10 HOH A 8 708 47 HOH HOH . 
X 10 HOH A 9 709 52 HOH HOH . 
X 10 HOH A 10 710 58 HOH HOH . 
X 10 HOH A 11 711 67 HOH HOH . 
X 10 HOH A 12 712 71 HOH HOH . 
X 10 HOH A 13 713 72 HOH HOH . 
X 10 HOH A 14 714 76 HOH HOH . 
X 10 HOH A 15 715 90 HOH HOH . 
X 10 HOH A 16 716 93 HOH HOH . 
X 10 HOH A 17 717 97 HOH HOH . 
X 10 HOH A 18 718 104 HOH HOH . 
X 10 HOH A 19 719 105 HOH HOH . 
X 10 HOH A 20 720 126 HOH HOH . 
X 10 HOH A 21 721 137 HOH HOH . 
X 10 HOH A 22 722 144 HOH HOH . 
X 10 HOH A 23 723 145 HOH HOH . 
X 10 HOH A 24 724 146 HOH HOH . 
X 10 HOH A 25 725 159 HOH HOH . 
X 10 HOH A 26 726 160 HOH HOH . 
X 10 HOH A 27 727 161 HOH HOH . 
X 10 HOH A 28 728 162 HOH HOH . 
X 10 HOH A 29 729 166 HOH HOH . 
X 10 HOH A 30 730 171 HOH HOH . 
X 10 HOH A 31 731 182 HOH HOH . 
X 10 HOH A 32 732 183 HOH HOH . 
X 10 HOH A 33 733 196 HOH HOH . 
X 10 HOH A 34 734 197 HOH HOH . 
X 10 HOH A 35 735 198 HOH HOH . 
X 10 HOH A 36 736 200 HOH HOH . 
Y 10 HOH B 1 301 40 HOH HOH . 
Y 10 HOH B 2 302 44 HOH HOH . 
Y 10 HOH B 3 303 48 HOH HOH . 
Y 10 HOH B 4 304 54 HOH HOH . 
Y 10 HOH B 5 305 55 HOH HOH . 
Y 10 HOH B 6 306 56 HOH HOH . 
Y 10 HOH B 7 307 62 HOH HOH . 
Y 10 HOH B 8 308 77 HOH HOH . 
Y 10 HOH B 9 309 101 HOH HOH . 
Y 10 HOH B 10 310 118 HOH HOH . 
Y 10 HOH B 11 311 119 HOH HOH . 
Y 10 HOH B 12 312 121 HOH HOH . 
Y 10 HOH B 13 313 142 HOH HOH . 
Y 10 HOH B 14 314 151 HOH HOH . 
Y 10 HOH B 15 315 155 HOH HOH . 
Y 10 HOH B 16 316 172 HOH HOH . 
Y 10 HOH B 17 317 175 HOH HOH . 
Y 10 HOH B 18 318 176 HOH HOH . 
Y 10 HOH B 19 319 180 HOH HOH . 
Y 10 HOH B 20 320 188 HOH HOH . 
Y 10 HOH B 21 321 204 HOH HOH . 
Y 10 HOH B 22 322 205 HOH HOH . 
Y 10 HOH B 23 323 206 HOH HOH . 
Z 10 HOH C 1 201 19 HOH HOH . 
Z 10 HOH C 2 202 36 HOH HOH . 
Z 10 HOH C 3 203 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 OLC . . . K 8 -8.152 -17.532 2.435 1 53.61 ? C10 OLC 608 A 1 
HETATM 2 C C9 OLC . . . K 8 -9.476 -17.649 2.585 1 53.18 ? C9 OLC 608 A 1 
HETATM 3 C C11 OLC . . . K 8 -7.147 -17.751 3.547 1 54.97 ? C11 OLC 608 A 1 
HETATM 4 C C8 OLC . . . K 8 -10.137 -18.01 3.903 1 57.8 ? C8 OLC 608 A 1 
HETATM 5 C C16 OLC . . . K 8 -1.558 -16.826 3.957 1 54.67 ? C16 OLC 608 A 1 
HETATM 6 C C12 OLC . . . K 8 -5.847 -18.305 2.974 1 52.72 ? C12 OLC 608 A 1 
HETATM 7 C C7 OLC . . . K 8 -11.532 -18.649 3.747 1 58.53 ? C7 OLC 608 A 1 
HETATM 8 C C15 OLC . . . K 8 -2.789 -15.997 3.6 1 55.72 ? C15 OLC 608 A 1 
HETATM 9 C C13 OLC . . . K 8 -4.695 -17.686 3.75 1 55.27 ? C13 OLC 608 A 1 
HETATM 10 C C6 OLC . . . K 8 -12.461 -18.213 4.886 1 56.01 ? C6 OLC 608 A 1 
HETATM 11 C C14 OLC . . . K 8 -3.839 -16.809 2.839 1 56.94 ? C14 OLC 608 A 1 
HETATM 12 C C5 OLC . . . K 8 -13.728 -19.052 4.992 1 56.56 ? C5 OLC 608 A 1 
HETATM 13 C C4 OLC . . . K 8 -14.17 -19.173 6.451 1 59.96 ? C4 OLC 608 A 1 
HETATM 14 C C3 OLC . . . K 8 -15.694 -19.193 6.562 1 63.89 ? C3 OLC 608 A 1 
HETATM 15 C C2 OLC . . . K 8 -16.216 -19.951 7.796 1 70.58 ? C2 OLC 608 A 1 
HETATM 16 C C21 OLC . . . K 8 -19.387 -20.252 9.565 1 73.72 ? C21 OLC 608 A 1 
HETATM 17 C C1 OLC . . . K 8 -17.704 -20.304 7.709 1 75.12 ? C1 OLC 608 A 1 
HETATM 18 O O19 OLC . . . K 8 -18.147 -21.079 6.863 1 79.72 ? O19 OLC 608 A 1 
HETATM 19 O O20 OLC . . . K 8 -18.448 -19.633 8.674 1 74.77 ? O20 OLC 608 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           19 
#