data_4G8O # _model_server_result.job_id Xi5QgLTbxF4i4QNtEOfQKw _model_server_result.datetime_utc '2024-11-21 23:27:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 4G8O # _exptl.entry_id 4G8O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 91.32 _cell.angle_beta 93.49 _cell.angle_gamma 115.65 _cell.entry_id 4G8O _cell.length_a 65.335 _cell.length_b 75.317 _cell.length_c 105.002 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,N 2 1 C,H,I,O 3 1 D,J,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 133 n n C1 C2 EDO sing 134 n n C1 H11 EDO sing 135 n n C1 H12 EDO sing 136 n n O1 HO1 EDO sing 137 n n C2 O2 EDO sing 138 n n C2 H21 EDO sing 139 n n C2 H22 EDO sing 140 n n O2 HO2 EDO sing 141 n n # _atom_sites.entry_id 4G8O _atom_sites.fract_transf_matrix[1][1] 0.015306 _atom_sites.fract_transf_matrix[1][2] 0.00735 _atom_sites.fract_transf_matrix[1][3] 0.001339 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014729 _atom_sites.fract_transf_matrix[2][3] 0.00081 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 401 401 SO4 SO4 . F 3 EDO A 1 402 402 EDO EDO . G 2 SO4 B 1 401 401 SO4 SO4 . H 2 SO4 C 1 401 401 SO4 SO4 . I 2 SO4 C 1 402 402 SO4 SO4 . J 2 SO4 D 1 401 401 SO4 SO4 . K 2 SO4 D 1 402 402 SO4 SO4 . L 4 96P D 1 403 403 96P 96P . M 5 HOH A 1 501 501 HOH HOH . M 5 HOH A 2 502 502 HOH HOH . M 5 HOH A 3 503 503 HOH HOH . M 5 HOH A 4 504 504 HOH HOH . M 5 HOH A 5 505 505 HOH HOH . M 5 HOH A 6 506 506 HOH HOH . M 5 HOH A 7 507 507 HOH HOH . M 5 HOH A 8 508 508 HOH HOH . M 5 HOH A 9 509 509 HOH HOH . M 5 HOH A 10 510 510 HOH HOH . M 5 HOH A 11 511 511 HOH HOH . M 5 HOH A 12 512 512 HOH HOH . M 5 HOH A 13 513 513 HOH HOH . M 5 HOH A 14 514 514 HOH HOH . M 5 HOH A 15 515 515 HOH HOH . M 5 HOH A 16 516 516 HOH HOH . M 5 HOH A 17 517 517 HOH HOH . M 5 HOH A 18 518 518 HOH HOH . M 5 HOH A 19 519 519 HOH HOH . M 5 HOH A 20 520 521 HOH HOH . M 5 HOH A 21 521 522 HOH HOH . M 5 HOH A 22 522 523 HOH HOH . M 5 HOH A 23 523 524 HOH HOH . M 5 HOH A 24 524 526 HOH HOH . M 5 HOH A 25 525 527 HOH HOH . M 5 HOH A 26 526 528 HOH HOH . M 5 HOH A 27 527 529 HOH HOH . M 5 HOH A 28 528 530 HOH HOH . M 5 HOH A 29 529 531 HOH HOH . M 5 HOH A 30 530 532 HOH HOH . M 5 HOH A 31 531 533 HOH HOH . M 5 HOH A 32 532 534 HOH HOH . M 5 HOH A 33 533 535 HOH HOH . M 5 HOH A 34 534 536 HOH HOH . M 5 HOH A 35 535 537 HOH HOH . M 5 HOH A 36 536 538 HOH HOH . M 5 HOH A 37 537 539 HOH HOH . M 5 HOH A 38 538 540 HOH HOH . M 5 HOH A 39 539 543 HOH HOH . M 5 HOH A 40 540 544 HOH HOH . N 5 HOH B 1 501 501 HOH HOH . N 5 HOH B 2 502 502 HOH HOH . N 5 HOH B 3 503 503 HOH HOH . N 5 HOH B 4 504 504 HOH HOH . N 5 HOH B 5 505 505 HOH HOH . N 5 HOH B 6 506 506 HOH HOH . N 5 HOH B 7 507 507 HOH HOH . N 5 HOH B 8 508 508 HOH HOH . N 5 HOH B 9 509 509 HOH HOH . N 5 HOH B 10 510 510 HOH HOH . N 5 HOH B 11 511 511 HOH HOH . N 5 HOH B 12 512 512 HOH HOH . N 5 HOH B 13 513 513 HOH HOH . N 5 HOH B 14 514 514 HOH HOH . N 5 HOH B 15 515 515 HOH HOH . N 5 HOH B 16 516 516 HOH HOH . N 5 HOH B 17 517 517 HOH HOH . N 5 HOH B 18 518 518 HOH HOH . N 5 HOH B 19 519 519 HOH HOH . N 5 HOH B 20 520 520 HOH HOH . N 5 HOH B 21 521 521 HOH HOH . N 5 HOH B 22 522 524 HOH HOH . N 5 HOH B 23 523 525 HOH HOH . N 5 HOH B 24 524 526 HOH HOH . N 5 HOH B 25 525 527 HOH HOH . N 5 HOH B 26 526 528 HOH HOH . N 5 HOH B 27 527 529 HOH HOH . N 5 HOH B 28 528 530 HOH HOH . N 5 HOH B 29 529 531 HOH HOH . N 5 HOH B 30 530 533 HOH HOH . N 5 HOH B 31 531 534 HOH HOH . N 5 HOH B 32 532 536 HOH HOH . N 5 HOH B 33 533 537 HOH HOH . N 5 HOH B 34 534 538 HOH HOH . N 5 HOH B 35 535 539 HOH HOH . N 5 HOH B 36 536 540 HOH HOH . N 5 HOH B 37 537 541 HOH HOH . N 5 HOH B 38 538 543 HOH HOH . N 5 HOH B 39 539 544 HOH HOH . N 5 HOH B 40 540 545 HOH HOH . N 5 HOH B 41 541 546 HOH HOH . N 5 HOH B 42 542 547 HOH HOH . N 5 HOH B 43 543 548 HOH HOH . N 5 HOH B 44 544 549 HOH HOH . N 5 HOH B 45 545 550 HOH HOH . N 5 HOH B 46 546 551 HOH HOH . O 5 HOH C 1 501 501 HOH HOH . O 5 HOH C 2 502 502 HOH HOH . O 5 HOH C 3 503 503 HOH HOH . O 5 HOH C 4 504 504 HOH HOH . O 5 HOH C 5 505 505 HOH HOH . O 5 HOH C 6 506 507 HOH HOH . O 5 HOH C 7 507 508 HOH HOH . O 5 HOH C 8 508 509 HOH HOH . O 5 HOH C 9 509 510 HOH HOH . O 5 HOH C 10 510 511 HOH HOH . O 5 HOH C 11 511 512 HOH HOH . O 5 HOH C 12 512 513 HOH HOH . O 5 HOH C 13 513 514 HOH HOH . O 5 HOH C 14 514 515 HOH HOH . O 5 HOH C 15 515 516 HOH HOH . O 5 HOH C 16 516 517 HOH HOH . O 5 HOH C 17 517 518 HOH HOH . O 5 HOH C 18 518 519 HOH HOH . O 5 HOH C 19 519 520 HOH HOH . O 5 HOH C 20 520 521 HOH HOH . O 5 HOH C 21 521 524 HOH HOH . O 5 HOH C 22 522 525 HOH HOH . O 5 HOH C 23 523 527 HOH HOH . O 5 HOH C 24 524 528 HOH HOH . O 5 HOH C 25 525 529 HOH HOH . O 5 HOH C 26 526 530 HOH HOH . O 5 HOH C 27 527 531 HOH HOH . O 5 HOH C 28 528 532 HOH HOH . O 5 HOH C 29 529 533 HOH HOH . O 5 HOH C 30 530 534 HOH HOH . O 5 HOH C 31 531 535 HOH HOH . O 5 HOH C 32 532 536 HOH HOH . O 5 HOH C 33 533 537 HOH HOH . O 5 HOH C 34 534 538 HOH HOH . O 5 HOH C 35 535 539 HOH HOH . O 5 HOH C 36 536 540 HOH HOH . O 5 HOH C 37 537 541 HOH HOH . P 5 HOH D 1 501 501 HOH HOH . P 5 HOH D 2 502 502 HOH HOH . P 5 HOH D 3 503 503 HOH HOH . P 5 HOH D 4 504 504 HOH HOH . P 5 HOH D 5 505 505 HOH HOH . P 5 HOH D 6 506 506 HOH HOH . P 5 HOH D 7 507 507 HOH HOH . P 5 HOH D 8 508 508 HOH HOH . P 5 HOH D 9 509 509 HOH HOH . P 5 HOH D 10 510 510 HOH HOH . P 5 HOH D 11 511 511 HOH HOH . P 5 HOH D 12 512 513 HOH HOH . P 5 HOH D 13 513 514 HOH HOH . P 5 HOH D 14 514 515 HOH HOH . P 5 HOH D 15 515 516 HOH HOH . P 5 HOH D 16 516 517 HOH HOH . P 5 HOH D 17 517 518 HOH HOH . P 5 HOH D 18 518 519 HOH HOH . P 5 HOH D 19 519 521 HOH HOH . P 5 HOH D 20 520 522 HOH HOH . P 5 HOH D 21 521 523 HOH HOH . P 5 HOH D 22 522 524 HOH HOH . P 5 HOH D 23 523 525 HOH HOH . P 5 HOH D 24 524 526 HOH HOH . P 5 HOH D 25 525 527 HOH HOH . P 5 HOH D 26 526 528 HOH HOH . P 5 HOH D 27 527 529 HOH HOH . P 5 HOH D 28 528 530 HOH HOH . P 5 HOH D 29 529 532 HOH HOH . P 5 HOH D 30 530 534 HOH HOH . P 5 HOH D 31 531 537 HOH HOH . P 5 HOH D 32 532 538 HOH HOH . P 5 HOH D 33 533 539 HOH HOH . P 5 HOH D 34 534 540 HOH HOH . P 5 HOH D 35 535 541 HOH HOH . P 5 HOH D 36 536 542 HOH HOH . P 5 HOH D 37 537 543 HOH HOH . P 5 HOH D 38 538 544 HOH HOH . P 5 HOH D 39 539 545 HOH HOH . P 5 HOH D 40 540 546 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 -2.532 12.095 10.605 1 40.71 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . F 3 -2.087 11.874 11.932 1 40.68 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . F 3 -1.893 11.041 9.669 1 40.58 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . F 3 -2.341 11.264 8.344 1 40.43 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #