data_4G8O # _model_server_result.job_id fZSJas8y8sjhC9S80okDcQ _model_server_result.datetime_utc '2024-11-22 00:39:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":403}' # _entry.id 4G8O # _exptl.entry_id 4G8O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 583.421 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-({[3-(trifluoromethyl)phenoxy]carbonyl}amino)propane-1,2-diyl bis(3,4,5-trihydroxybenzoate)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 91.32 _cell.angle_beta 93.49 _cell.angle_gamma 115.65 _cell.entry_id 4G8O _cell.length_a 65.335 _cell.length_b 75.317 _cell.length_c 105.002 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,N 2 1 C,H,I,O 3 1 D,J,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H20 F3 N O12' _chem_comp.formula_weight 583.421 _chem_comp.id 96P _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-({[3-(trifluoromethyl)phenoxy]carbonyl}amino)propane-1,2-diyl bis(3,4,5-trihydroxybenzoate)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O10 C16 96P sing 1 n n O11 C17 96P sing 2 n n F2 C24 96P sing 3 n n C16 C17 96P doub 4 n y C16 C15 96P sing 5 n y C17 C18 96P sing 6 n y O9 C15 96P sing 7 n n C15 C14 96P doub 8 n y F3 C24 96P sing 9 n n C24 F1 96P sing 10 n n C24 C23 96P sing 11 n n C18 C13 96P doub 12 n y C14 C13 96P sing 13 n y C23 C25 96P doub 14 n y C23 C22 96P sing 15 n y C13 C12 96P sing 16 n n C25 C19 96P sing 17 n y C22 C21 96P doub 18 n y C19 O12 96P sing 19 n n C19 C20 96P doub 20 n y C12 O8 96P doub 21 n n C12 O7 96P sing 22 n n O12 C1 96P sing 23 n n C21 C20 96P sing 24 n y O7 C3 96P sing 25 n n C1 N 96P sing 26 n n C1 O1 96P doub 27 n n N C2 96P sing 28 n n C3 C2 96P sing 29 n n C3 C4 96P sing 30 n n C4 O2 96P sing 31 n n O2 C5 96P sing 32 n n C5 O3 96P doub 33 n n C5 C6 96P sing 34 n n C11 C6 96P doub 35 n y C11 C10 96P sing 36 n y O6 C10 96P sing 37 n n C6 C7 96P sing 38 n y C10 C9 96P doub 39 n y C7 C8 96P doub 40 n y C9 C8 96P sing 41 n y C9 O5 96P sing 42 n n C8 O4 96P sing 43 n n C22 H1 96P sing 44 n n C21 H2 96P sing 45 n n C20 H3 96P sing 46 n n C25 H4 96P sing 47 n n N H5 96P sing 48 n n C2 H6 96P sing 49 n n C2 H7 96P sing 50 n n C3 H8 96P sing 51 n n C18 H9 96P sing 52 n n O11 H10 96P sing 53 n n O10 H11 96P sing 54 n n O9 H12 96P sing 55 n n C14 H13 96P sing 56 n n C4 H14 96P sing 57 n n C4 H15 96P sing 58 n n C11 H16 96P sing 59 n n O6 H17 96P sing 60 n n O5 H18 96P sing 61 n n O4 H19 96P sing 62 n n C7 H20 96P sing 63 n n # _atom_sites.entry_id 4G8O _atom_sites.fract_transf_matrix[1][1] 0.015306 _atom_sites.fract_transf_matrix[1][2] 0.00735 _atom_sites.fract_transf_matrix[1][3] 0.001339 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014729 _atom_sites.fract_transf_matrix[2][3] 0.00081 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 401 401 SO4 SO4 . F 3 EDO A 1 402 402 EDO EDO . G 2 SO4 B 1 401 401 SO4 SO4 . H 2 SO4 C 1 401 401 SO4 SO4 . I 2 SO4 C 1 402 402 SO4 SO4 . J 2 SO4 D 1 401 401 SO4 SO4 . K 2 SO4 D 1 402 402 SO4 SO4 . L 4 96P D 1 403 403 96P 96P . M 5 HOH A 1 501 501 HOH HOH . M 5 HOH A 2 502 502 HOH HOH . M 5 HOH A 3 503 503 HOH HOH . M 5 HOH A 4 504 504 HOH HOH . M 5 HOH A 5 505 505 HOH HOH . M 5 HOH A 6 506 506 HOH HOH . M 5 HOH A 7 507 507 HOH HOH . M 5 HOH A 8 508 508 HOH HOH . M 5 HOH A 9 509 509 HOH HOH . M 5 HOH A 10 510 510 HOH HOH . M 5 HOH A 11 511 511 HOH HOH . M 5 HOH A 12 512 512 HOH HOH . M 5 HOH A 13 513 513 HOH HOH . M 5 HOH A 14 514 514 HOH HOH . M 5 HOH A 15 515 515 HOH HOH . M 5 HOH A 16 516 516 HOH HOH . M 5 HOH A 17 517 517 HOH HOH . M 5 HOH A 18 518 518 HOH HOH . M 5 HOH A 19 519 519 HOH HOH . M 5 HOH A 20 520 521 HOH HOH . M 5 HOH A 21 521 522 HOH HOH . M 5 HOH A 22 522 523 HOH HOH . M 5 HOH A 23 523 524 HOH HOH . M 5 HOH A 24 524 526 HOH HOH . M 5 HOH A 25 525 527 HOH HOH . M 5 HOH A 26 526 528 HOH HOH . M 5 HOH A 27 527 529 HOH HOH . M 5 HOH A 28 528 530 HOH HOH . M 5 HOH A 29 529 531 HOH HOH . M 5 HOH A 30 530 532 HOH HOH . M 5 HOH A 31 531 533 HOH HOH . M 5 HOH A 32 532 534 HOH HOH . M 5 HOH A 33 533 535 HOH HOH . M 5 HOH A 34 534 536 HOH HOH . M 5 HOH A 35 535 537 HOH HOH . M 5 HOH A 36 536 538 HOH HOH . M 5 HOH A 37 537 539 HOH HOH . M 5 HOH A 38 538 540 HOH HOH . M 5 HOH A 39 539 543 HOH HOH . M 5 HOH A 40 540 544 HOH HOH . N 5 HOH B 1 501 501 HOH HOH . N 5 HOH B 2 502 502 HOH HOH . N 5 HOH B 3 503 503 HOH HOH . N 5 HOH B 4 504 504 HOH HOH . N 5 HOH B 5 505 505 HOH HOH . N 5 HOH B 6 506 506 HOH HOH . N 5 HOH B 7 507 507 HOH HOH . N 5 HOH B 8 508 508 HOH HOH . N 5 HOH B 9 509 509 HOH HOH . N 5 HOH B 10 510 510 HOH HOH . N 5 HOH B 11 511 511 HOH HOH . N 5 HOH B 12 512 512 HOH HOH . N 5 HOH B 13 513 513 HOH HOH . N 5 HOH B 14 514 514 HOH HOH . N 5 HOH B 15 515 515 HOH HOH . N 5 HOH B 16 516 516 HOH HOH . N 5 HOH B 17 517 517 HOH HOH . N 5 HOH B 18 518 518 HOH HOH . N 5 HOH B 19 519 519 HOH HOH . N 5 HOH B 20 520 520 HOH HOH . N 5 HOH B 21 521 521 HOH HOH . N 5 HOH B 22 522 524 HOH HOH . N 5 HOH B 23 523 525 HOH HOH . N 5 HOH B 24 524 526 HOH HOH . N 5 HOH B 25 525 527 HOH HOH . N 5 HOH B 26 526 528 HOH HOH . N 5 HOH B 27 527 529 HOH HOH . N 5 HOH B 28 528 530 HOH HOH . N 5 HOH B 29 529 531 HOH HOH . N 5 HOH B 30 530 533 HOH HOH . N 5 HOH B 31 531 534 HOH HOH . N 5 HOH B 32 532 536 HOH HOH . N 5 HOH B 33 533 537 HOH HOH . N 5 HOH B 34 534 538 HOH HOH . N 5 HOH B 35 535 539 HOH HOH . N 5 HOH B 36 536 540 HOH HOH . N 5 HOH B 37 537 541 HOH HOH . N 5 HOH B 38 538 543 HOH HOH . N 5 HOH B 39 539 544 HOH HOH . N 5 HOH B 40 540 545 HOH HOH . N 5 HOH B 41 541 546 HOH HOH . N 5 HOH B 42 542 547 HOH HOH . N 5 HOH B 43 543 548 HOH HOH . N 5 HOH B 44 544 549 HOH HOH . N 5 HOH B 45 545 550 HOH HOH . N 5 HOH B 46 546 551 HOH HOH . O 5 HOH C 1 501 501 HOH HOH . O 5 HOH C 2 502 502 HOH HOH . O 5 HOH C 3 503 503 HOH HOH . O 5 HOH C 4 504 504 HOH HOH . O 5 HOH C 5 505 505 HOH HOH . O 5 HOH C 6 506 507 HOH HOH . O 5 HOH C 7 507 508 HOH HOH . O 5 HOH C 8 508 509 HOH HOH . O 5 HOH C 9 509 510 HOH HOH . O 5 HOH C 10 510 511 HOH HOH . O 5 HOH C 11 511 512 HOH HOH . O 5 HOH C 12 512 513 HOH HOH . O 5 HOH C 13 513 514 HOH HOH . O 5 HOH C 14 514 515 HOH HOH . O 5 HOH C 15 515 516 HOH HOH . O 5 HOH C 16 516 517 HOH HOH . O 5 HOH C 17 517 518 HOH HOH . O 5 HOH C 18 518 519 HOH HOH . O 5 HOH C 19 519 520 HOH HOH . O 5 HOH C 20 520 521 HOH HOH . O 5 HOH C 21 521 524 HOH HOH . O 5 HOH C 22 522 525 HOH HOH . O 5 HOH C 23 523 527 HOH HOH . O 5 HOH C 24 524 528 HOH HOH . O 5 HOH C 25 525 529 HOH HOH . O 5 HOH C 26 526 530 HOH HOH . O 5 HOH C 27 527 531 HOH HOH . O 5 HOH C 28 528 532 HOH HOH . O 5 HOH C 29 529 533 HOH HOH . O 5 HOH C 30 530 534 HOH HOH . O 5 HOH C 31 531 535 HOH HOH . O 5 HOH C 32 532 536 HOH HOH . O 5 HOH C 33 533 537 HOH HOH . O 5 HOH C 34 534 538 HOH HOH . O 5 HOH C 35 535 539 HOH HOH . O 5 HOH C 36 536 540 HOH HOH . O 5 HOH C 37 537 541 HOH HOH . P 5 HOH D 1 501 501 HOH HOH . P 5 HOH D 2 502 502 HOH HOH . P 5 HOH D 3 503 503 HOH HOH . P 5 HOH D 4 504 504 HOH HOH . P 5 HOH D 5 505 505 HOH HOH . P 5 HOH D 6 506 506 HOH HOH . P 5 HOH D 7 507 507 HOH HOH . P 5 HOH D 8 508 508 HOH HOH . P 5 HOH D 9 509 509 HOH HOH . P 5 HOH D 10 510 510 HOH HOH . P 5 HOH D 11 511 511 HOH HOH . P 5 HOH D 12 512 513 HOH HOH . P 5 HOH D 13 513 514 HOH HOH . P 5 HOH D 14 514 515 HOH HOH . P 5 HOH D 15 515 516 HOH HOH . P 5 HOH D 16 516 517 HOH HOH . P 5 HOH D 17 517 518 HOH HOH . P 5 HOH D 18 518 519 HOH HOH . P 5 HOH D 19 519 521 HOH HOH . P 5 HOH D 20 520 522 HOH HOH . P 5 HOH D 21 521 523 HOH HOH . P 5 HOH D 22 522 524 HOH HOH . P 5 HOH D 23 523 525 HOH HOH . P 5 HOH D 24 524 526 HOH HOH . P 5 HOH D 25 525 527 HOH HOH . P 5 HOH D 26 526 528 HOH HOH . P 5 HOH D 27 527 529 HOH HOH . P 5 HOH D 28 528 530 HOH HOH . P 5 HOH D 29 529 532 HOH HOH . P 5 HOH D 30 530 534 HOH HOH . P 5 HOH D 31 531 537 HOH HOH . P 5 HOH D 32 532 538 HOH HOH . P 5 HOH D 33 533 539 HOH HOH . P 5 HOH D 34 534 540 HOH HOH . P 5 HOH D 35 535 541 HOH HOH . P 5 HOH D 36 536 542 HOH HOH . P 5 HOH D 37 537 543 HOH HOH . P 5 HOH D 38 538 544 HOH HOH . P 5 HOH D 39 539 545 HOH HOH . P 5 HOH D 40 540 546 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F3 96P . . . L 4 31.221 -22.302 -92.371 0 85.2 ? F3 96P 403 D 1 HETATM 2 C C24 96P . . . L 4 30.206 -23.157 -92.303 0 85.2 ? C24 96P 403 D 1 HETATM 3 F F1 96P . . . L 4 29.132 -22.414 -92.061 0 85.2 ? F1 96P 403 D 1 HETATM 4 F F2 96P . . . L 4 30.049 -23.631 -93.53 0 85.2 ? F2 96P 403 D 1 HETATM 5 C C23 96P . . . L 4 30.416 -24.239 -91.289 0 85.2 ? C23 96P 403 D 1 HETATM 6 C C22 96P . . . L 4 29.349 -24.751 -90.558 0 85.2 ? C22 96P 403 D 1 HETATM 7 C C21 96P . . . L 4 29.549 -25.767 -89.631 0 85.2 ? C21 96P 403 D 1 HETATM 8 C C20 96P . . . L 4 30.821 -26.288 -89.421 0 85.2 ? C20 96P 403 D 1 HETATM 9 C C25 96P . . . L 4 31.687 -24.763 -91.075 0 85.2 ? C25 96P 403 D 1 HETATM 10 C C19 96P . . . L 4 31.885 -25.779 -90.15 0 85.2 ? C19 96P 403 D 1 HETATM 11 O O12 96P . . . L 4 33.18 -26.301 -89.96 0 85.2 ? O12 96P 403 D 1 HETATM 12 C C1 96P . . . L 4 33.984 -25.72 -89.01 0.8 85.2 ? C1 96P 403 D 1 HETATM 13 O O1 96P . . . L 4 33.65 -24.769 -88.337 0.8 85.2 ? O1 96P 403 D 1 HETATM 14 N N 96P . . . L 4 35.171 -26.344 -88.932 0.8 85.2 ? N 96P 403 D 1 HETATM 15 C C2 96P . . . L 4 36.205 -25.936 -87.993 0.8 85.2 ? C2 96P 403 D 1 HETATM 16 C C3 96P . . . L 4 37.432 -26.818 -88.093 0.8 85.2 ? C3 96P 403 D 1 HETATM 17 O O7 96P . . . L 4 37.47 -27.757 -89.218 0.8 85.2 ? O7 96P 403 D 1 HETATM 18 C C12 96P . . . L 4 38.476 -27.642 -90.109 0.8 85.2 ? C12 96P 403 D 1 HETATM 19 C C13 96P . . . L 4 38.286 -28.538 -91.288 0 85.2 ? C13 96P 403 D 1 HETATM 20 C C18 96P . . . L 4 37.127 -29.295 -91.434 0 85.2 ? C18 96P 403 D 1 HETATM 21 C C17 96P . . . L 4 36.936 -30.069 -92.573 0 85.2 ? C17 96P 403 D 1 HETATM 22 O O11 96P . . . L 4 35.81 -30.813 -92.718 0 85.2 ? O11 96P 403 D 1 HETATM 23 C C16 96P . . . L 4 37.927 -30.123 -93.555 0 85.2 ? C16 96P 403 D 1 HETATM 24 O O10 96P . . . L 4 37.751 -30.899 -94.659 0 85.2 ? O10 96P 403 D 1 HETATM 25 C C15 96P . . . L 4 39.066 -29.328 -93.43 0 85.2 ? C15 96P 403 D 1 HETATM 26 O O9 96P . . . L 4 40.026 -29.378 -94.386 0 85.2 ? O9 96P 403 D 1 HETATM 27 C C14 96P . . . L 4 39.243 -28.538 -92.302 0 85.2 ? C14 96P 403 D 1 HETATM 28 O O8 96P . . . L 4 39.405 -26.883 -89.973 0 85.2 ? O8 96P 403 D 1 HETATM 29 C C4 96P . . . L 4 37.684 -27.561 -86.806 0.8 85.2 ? C4 96P 403 D 1 HETATM 30 O O2 96P . . . L 4 39.088 -27.608 -86.476 0.8 85.2 ? O2 96P 403 D 1 HETATM 31 C C5 96P . . . L 4 39.467 -28.523 -85.571 0.8 85.2 ? C5 96P 403 D 1 HETATM 32 O O3 96P . . . L 4 38.784 -29.465 -85.249 0.8 85.2 ? O3 96P 403 D 1 HETATM 33 C C6 96P . . . L 4 40.821 -28.243 -84.997 0.8 85.2 ? C6 96P 403 D 1 HETATM 34 C C11 96P . . . L 4 41.35 -29.114 -84.051 0.8 85.2 ? C11 96P 403 D 1 HETATM 35 C C10 96P . . . L 4 42.588 -28.859 -83.469 0.8 85.2 ? C10 96P 403 D 1 HETATM 36 O O6 96P . . . L 4 43.058 -29.618 -82.454 0.8 85.2 ? O6 96P 403 D 1 HETATM 37 C C9 96P . . . L 4 43.312 -27.733 -83.856 0.8 85.2 ? C9 96P 403 D 1 HETATM 38 O O5 96P . . . L 4 44.523 -27.476 -83.289 0.8 85.2 ? O5 96P 403 D 1 HETATM 39 C C8 96P . . . L 4 42.839 -26.923 -84.883 0.8 85.2 ? C8 96P 403 D 1 HETATM 40 O O4 96P . . . L 4 43.591 -25.865 -85.267 0.8 85.2 ? O4 96P 403 D 1 HETATM 41 C C7 96P . . . L 4 41.578 -27.154 -85.428 0.8 85.2 ? C7 96P 403 D 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 41 #