data_4G9Z # _model_server_result.job_id IK1OdyoOgxDVhTmZ_E0gUQ _model_server_result.datetime_utc '2024-11-08 04:35:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4g9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 4G9Z # _exptl.entry_id 4G9Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4G9Z _cell.length_a 46.744 _cell.length_b 46.744 _cell.length_c 217.315 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4G9Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OE2 GLU 43 A GLU 399 1_555 D ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc2 C SG CYS 150 A CYS 506 1_555 D ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc3 C NE2 HIS 153 A HIS 509 1_555 D ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc4 C SG CYS 173 A CYS 529 1_555 D ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? hydrog WATSON-CRICK hydrog1 A N1 G 1 E G 4 1_555 B N3 C 4 F C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 G 1 E G 4 1_555 B O2 C 4 F C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 G 1 E G 4 1_555 B N4 C 4 F C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 C 2 E C 5 1_555 B N1 G 3 F G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 C 2 E C 5 1_555 B O6 G 3 F G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 C 2 E C 5 1_555 B N2 G 3 F G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 C 3 E C 6 1_555 B N1 G 2 F G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 C 3 E C 6 1_555 B O6 G 2 F G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 C 3 E C 6 1_555 B N2 G 2 F G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N3 C 4 E C 7 1_555 B N1 G 1 F G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N4 C 4 E C 7 1_555 B O6 G 1 F G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O2 C 4 E C 7 1_555 B N2 G 1 F G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4G9Z _atom_sites.fract_transf_matrix[1][1] 0.021393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 601 1 ZN ZN . E 5 HOH E 1 101 17 HOH HOH . E 5 HOH E 2 102 3 HOH HOH . F 5 HOH F 1 101 33 HOH HOH . F 5 HOH F 2 102 35 HOH HOH . F 5 HOH F 3 103 40 HOH HOH . G 5 HOH A 1 701 1 HOH HOH . G 5 HOH A 2 702 2 HOH HOH . G 5 HOH A 3 703 3 HOH HOH . G 5 HOH A 4 704 5 HOH HOH . G 5 HOH A 5 705 7 HOH HOH . G 5 HOH A 6 706 8 HOH HOH . G 5 HOH A 7 707 10 HOH HOH . G 5 HOH A 8 708 12 HOH HOH . G 5 HOH A 9 709 13 HOH HOH . G 5 HOH A 10 710 14 HOH HOH . G 5 HOH A 11 711 15 HOH HOH . G 5 HOH A 12 712 16 HOH HOH . G 5 HOH A 13 713 18 HOH HOH . G 5 HOH A 14 714 19 HOH HOH . G 5 HOH A 15 715 21 HOH HOH . G 5 HOH A 16 716 23 HOH HOH . G 5 HOH A 17 717 24 HOH HOH . G 5 HOH A 18 718 26 HOH HOH . G 5 HOH A 19 719 27 HOH HOH . G 5 HOH A 20 720 29 HOH HOH . G 5 HOH A 21 721 30 HOH HOH . G 5 HOH A 22 722 31 HOH HOH . G 5 HOH A 23 723 36 HOH HOH . G 5 HOH A 24 724 37 HOH HOH . G 5 HOH A 25 725 38 HOH HOH . G 5 HOH A 26 726 41 HOH HOH . G 5 HOH A 27 727 43 HOH HOH . G 5 HOH A 28 728 46 HOH HOH . G 5 HOH A 29 729 47 HOH HOH . G 5 HOH A 30 730 49 HOH HOH . G 5 HOH A 31 731 50 HOH HOH . G 5 HOH A 32 732 55 HOH HOH . G 5 HOH A 33 733 57 HOH HOH . G 5 HOH A 34 734 60 HOH HOH . G 5 HOH A 35 735 62 HOH HOH . G 5 HOH A 36 736 68 HOH HOH . G 5 HOH A 37 737 72 HOH HOH . G 5 HOH A 38 738 77 HOH HOH . G 5 HOH A 39 739 79 HOH HOH . G 5 HOH A 40 740 87 HOH HOH . G 5 HOH A 41 741 88 HOH HOH . G 5 HOH A 42 742 90 HOH HOH . G 5 HOH A 43 743 94 HOH HOH . G 5 HOH A 44 744 97 HOH HOH . G 5 HOH A 45 745 103 HOH HOH . G 5 HOH A 46 746 106 HOH HOH . G 5 HOH A 47 747 109 HOH HOH . G 5 HOH A 48 748 118 HOH HOH . G 5 HOH A 49 749 136 HOH HOH . G 5 HOH A 50 750 148 HOH HOH . G 5 HOH A 51 751 153 HOH HOH . G 5 HOH A 52 752 5 HOH HOH . G 5 HOH A 53 753 7 HOH HOH . G 5 HOH A 54 754 8 HOH HOH . G 5 HOH A 55 755 14 HOH HOH . G 5 HOH A 56 756 23 HOH HOH . G 5 HOH A 57 757 27 HOH HOH . G 5 HOH A 58 758 30 HOH HOH . G 5 HOH A 59 759 35 HOH HOH . G 5 HOH A 60 760 36 HOH HOH . G 5 HOH A 61 761 39 HOH HOH . G 5 HOH A 62 762 55 HOH HOH . G 5 HOH A 63 763 57 HOH HOH . G 5 HOH A 64 764 60 HOH HOH . G 5 HOH A 65 765 79 HOH HOH . G 5 HOH A 66 766 8 HOH HOH . G 5 HOH A 67 767 9 HOH HOH . G 5 HOH A 68 768 18 HOH HOH . G 5 HOH A 69 769 20 HOH HOH . G 5 HOH A 70 770 23 HOH HOH . G 5 HOH A 71 771 28 HOH HOH . G 5 HOH A 72 772 31 HOH HOH . G 5 HOH A 73 773 35 HOH HOH . G 5 HOH A 74 774 41 HOH HOH . G 5 HOH A 75 775 1 HOH HOH . G 5 HOH A 76 776 12 HOH HOH . G 5 HOH A 77 777 16 HOH HOH . G 5 HOH A 78 778 19 HOH HOH . G 5 HOH A 79 779 75 HOH HOH . G 5 HOH A 80 780 98 HOH HOH . G 5 HOH A 81 781 6 HOH HOH . G 5 HOH A 82 782 15 HOH HOH . G 5 HOH A 83 783 86 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 6.268 _atom_site.Cartn_y -12.71 _atom_site.Cartn_z 19.941 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #