data_4GAA # _model_server_result.job_id tQiPpqOR9rnagKIgZNYINA _model_server_result.datetime_utc '2024-11-26 03:11:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gaa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 4GAA # _exptl.entry_id 4GAA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.373 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.58 _cell.angle_gamma 90 _cell.entry_id 4GAA _cell.length_a 222.12 _cell.length_b 52.17 _cell.length_c 109.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GAA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 292 A HIS 292 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc2 A NE2 HIS 296 A HIS 296 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc3 A OE2 GLU 315 A GLU 315 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc4 A OE1 GLU 315 A GLU 315 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc5 C ZN ZN . A ZN 701 1_555 D O3 BES . A BES 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc6 C ZN ZN . A ZN 701 1_555 D O2 BES . A BES 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc7 B NE2 HIS 292 B HIS 292 1_555 E ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc8 B NE2 HIS 296 B HIS 296 1_555 E ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc9 B OE2 GLU 315 B GLU 315 1_555 E ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc10 B OE1 GLU 315 B GLU 315 1_555 E ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc11 E ZN ZN . B ZN 701 1_555 F O2 BES . B BES 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc12 E ZN ZN . B ZN 701 1_555 F O3 BES . B BES 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? # _chem_comp.formula 'C16 H24 N2 O4' _chem_comp.formula_weight 308.373 _chem_comp.id BES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BESTATIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C1 BES sing 70 n n N2 HN21 BES sing 71 n n N2 HN22 BES sing 72 n n C1 C6 BES sing 73 n n C1 C2 BES sing 74 n n C1 H1 BES sing 75 n n C6 C7 BES sing 76 n n C6 H61 BES sing 77 n n C6 H62 BES sing 78 n n C7 C8 BES doub 79 n y C7 C12 BES sing 80 n y C8 C9 BES sing 81 n y C8 H8 BES sing 82 n n C12 C11 BES doub 83 n y C12 H12 BES sing 84 n n C9 C10 BES doub 85 n y C9 H9 BES sing 86 n n C11 C10 BES sing 87 n y C11 H11 BES sing 88 n n C10 H10 BES sing 89 n n C2 O2 BES sing 90 n n C2 C3 BES sing 91 n n C2 H2 BES sing 92 n n O2 HO2 BES sing 93 n n C3 O3 BES doub 94 n n C3 N1 BES sing 95 n n N1 C4 BES sing 96 n n N1 HN BES sing 97 n n C4 C13 BES sing 98 n n C4 C5 BES sing 99 n n C4 H4 BES sing 100 n n C13 C14 BES sing 101 n n C13 H131 BES sing 102 n n C13 H132 BES sing 103 n n C14 C15 BES sing 104 n n C14 C16 BES sing 105 n n C14 H14 BES sing 106 n n C15 H151 BES sing 107 n n C15 H152 BES sing 108 n n C15 H153 BES sing 109 n n C16 H161 BES sing 110 n n C16 H162 BES sing 111 n n C16 H163 BES sing 112 n n C5 O1 BES sing 113 n n C5 O4 BES doub 114 n n O1 HO1 BES sing 115 n n # _atom_sites.entry_id 4GAA _atom_sites.fract_transf_matrix[1][1] 0.004502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001781 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 701 1 ZN ZN . D 3 BES A 1 702 1951 BES BES . E 2 ZN B 1 701 2 ZN ZN . F 3 BES B 1 702 1951 BES BES . G 4 HOH A 1 801 1 HOH HOH . G 4 HOH A 2 802 2 HOH HOH . G 4 HOH A 3 803 3 HOH HOH . G 4 HOH A 4 804 5 HOH HOH . G 4 HOH A 5 805 7 HOH HOH . G 4 HOH A 6 806 8 HOH HOH . G 4 HOH A 7 807 9 HOH HOH . G 4 HOH A 8 808 10 HOH HOH . G 4 HOH A 9 809 12 HOH HOH . G 4 HOH A 10 810 13 HOH HOH . G 4 HOH A 11 811 18 HOH HOH . G 4 HOH A 12 812 19 HOH HOH . G 4 HOH A 13 813 20 HOH HOH . G 4 HOH A 14 814 22 HOH HOH . G 4 HOH A 15 815 23 HOH HOH . G 4 HOH A 16 816 24 HOH HOH . G 4 HOH A 17 817 25 HOH HOH . G 4 HOH A 18 818 26 HOH HOH . G 4 HOH A 19 819 28 HOH HOH . G 4 HOH A 20 820 29 HOH HOH . G 4 HOH A 21 821 30 HOH HOH . G 4 HOH A 22 822 31 HOH HOH . G 4 HOH A 23 823 32 HOH HOH . G 4 HOH A 24 824 33 HOH HOH . G 4 HOH A 25 825 34 HOH HOH . G 4 HOH A 26 826 35 HOH HOH . G 4 HOH A 27 827 36 HOH HOH . G 4 HOH A 28 828 37 HOH HOH . G 4 HOH A 29 829 38 HOH HOH . G 4 HOH A 30 830 39 HOH HOH . G 4 HOH A 31 831 40 HOH HOH . G 4 HOH A 32 832 43 HOH HOH . G 4 HOH A 33 833 44 HOH HOH . G 4 HOH A 34 834 45 HOH HOH . G 4 HOH A 35 835 47 HOH HOH . G 4 HOH A 36 836 48 HOH HOH . G 4 HOH A 37 837 49 HOH HOH . G 4 HOH A 38 838 50 HOH HOH . G 4 HOH A 39 839 51 HOH HOH . G 4 HOH A 40 840 52 HOH HOH . G 4 HOH A 41 841 53 HOH HOH . G 4 HOH A 42 842 54 HOH HOH . G 4 HOH A 43 843 55 HOH HOH . G 4 HOH A 44 844 76 HOH HOH . G 4 HOH A 45 845 77 HOH HOH . G 4 HOH A 46 846 79 HOH HOH . G 4 HOH A 47 847 80 HOH HOH . G 4 HOH A 48 848 81 HOH HOH . G 4 HOH A 49 849 90 HOH HOH . G 4 HOH A 50 850 94 HOH HOH . G 4 HOH A 51 851 95 HOH HOH . G 4 HOH A 52 852 96 HOH HOH . G 4 HOH A 53 853 98 HOH HOH . G 4 HOH A 54 854 101 HOH HOH . G 4 HOH A 55 855 102 HOH HOH . G 4 HOH A 56 856 103 HOH HOH . G 4 HOH A 57 857 110 HOH HOH . H 4 HOH B 1 801 4 HOH HOH . H 4 HOH B 2 802 15 HOH HOH . H 4 HOH B 3 803 16 HOH HOH . H 4 HOH B 4 804 21 HOH HOH . H 4 HOH B 5 805 46 HOH HOH . H 4 HOH B 6 806 57 HOH HOH . H 4 HOH B 7 807 59 HOH HOH . H 4 HOH B 8 808 60 HOH HOH . H 4 HOH B 9 809 61 HOH HOH . H 4 HOH B 10 810 62 HOH HOH . H 4 HOH B 11 811 63 HOH HOH . H 4 HOH B 12 812 64 HOH HOH . H 4 HOH B 13 813 65 HOH HOH . H 4 HOH B 14 814 67 HOH HOH . H 4 HOH B 15 815 68 HOH HOH . H 4 HOH B 16 816 69 HOH HOH . H 4 HOH B 17 817 70 HOH HOH . H 4 HOH B 18 818 71 HOH HOH . H 4 HOH B 19 819 74 HOH HOH . H 4 HOH B 20 820 75 HOH HOH . H 4 HOH B 21 821 85 HOH HOH . H 4 HOH B 22 822 86 HOH HOH . H 4 HOH B 23 823 87 HOH HOH . H 4 HOH B 24 824 88 HOH HOH . H 4 HOH B 25 825 89 HOH HOH . H 4 HOH B 26 826 91 HOH HOH . H 4 HOH B 27 827 92 HOH HOH . H 4 HOH B 28 828 93 HOH HOH . H 4 HOH B 29 829 97 HOH HOH . H 4 HOH B 30 830 100 HOH HOH . H 4 HOH B 31 831 104 HOH HOH . H 4 HOH B 32 832 105 HOH HOH . H 4 HOH B 33 833 106 HOH HOH . H 4 HOH B 34 834 107 HOH HOH . H 4 HOH B 35 835 108 HOH HOH . H 4 HOH B 36 836 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 BES . . . D 3 -8.599 24.801 24.475 1 33 ? N2 BES 702 A 1 HETATM 2 C C1 BES . . . D 3 -7.916 25.759 25.317 1 38.86 ? C1 BES 702 A 1 HETATM 3 C C6 BES . . . D 3 -6.67 26.3 24.598 1 43.17 ? C6 BES 702 A 1 HETATM 4 C C7 BES . . . D 3 -6.967 26.876 23.227 1 45.5 ? C7 BES 702 A 1 HETATM 5 C C8 BES . . . D 3 -7.668 28.085 23.09 1 46.37 ? C8 BES 702 A 1 HETATM 6 C C12 BES . . . D 3 -6.541 26.182 22.086 1 46.5 ? C12 BES 702 A 1 HETATM 7 C C9 BES . . . D 3 -7.954 28.605 21.823 1 45.5 ? C9 BES 702 A 1 HETATM 8 C C11 BES . . . D 3 -6.801 26.714 20.815 1 48.91 ? C11 BES 702 A 1 HETATM 9 C C10 BES . . . D 3 -7.501 27.928 20.684 1 48.92 ? C10 BES 702 A 1 HETATM 10 C C2 BES . . . D 3 -7.498 25.041 26.588 1 42.82 ? C2 BES 702 A 1 HETATM 11 O O2 BES . . . D 3 -8.508 24.19 27.154 1 43.63 ? O2 BES 702 A 1 HETATM 12 C C3 BES . . . D 3 -6.888 25.932 27.619 1 48.54 ? C3 BES 702 A 1 HETATM 13 O O3 BES . . . D 3 -7.509 26.852 28.126 1 51.77 ? O3 BES 702 A 1 HETATM 14 N N1 BES . . . D 3 -5.649 25.587 27.919 1 52.41 ? N1 BES 702 A 1 HETATM 15 C C4 BES . . . D 3 -4.771 26.23 28.88 1 57.77 ? C4 BES 702 A 1 HETATM 16 C C13 BES . . . D 3 -4.913 25.35 30.124 1 58.35 ? C13 BES 702 A 1 HETATM 17 C C14 BES . . . D 3 -4.809 26.155 31.42 1 61.11 ? C14 BES 702 A 1 HETATM 18 C C15 BES . . . D 3 -6.093 26.9 31.774 1 61.43 ? C15 BES 702 A 1 HETATM 19 C C16 BES . . . D 3 -4.373 25.289 32.595 1 61.53 ? C16 BES 702 A 1 HETATM 20 C C5 BES . . . D 3 -3.359 26.214 28.352 1 63.3 ? C5 BES 702 A 1 HETATM 21 O O1 BES . . . D 3 -3.101 25.463 27.382 1 64.67 ? O1 BES 702 A 1 HETATM 22 O O4 BES . . . D 3 -2.486 26.955 28.872 1 65.36 ? O4 BES 702 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 22 #