data_4GAV
#
_model_server_result.job_id            xzQAgvSccA_WtNudwesqbQ 
_model_server_result.datetime_utc      '2024-11-24 13:55:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4gav 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":601}' 
#
_entry.id    4GAV 
#
_exptl.entry_id    4GAV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4GAV 
_cell.length_a            65.589 
_cell.length_b            111.926 
_cell.length_c            165.525 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4GAV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 70 n n 
PA O2A FAD sing 71 n n 
PA O5B FAD sing 72 n n 
PA O3P FAD sing 73 n n 
O2A HOA2 FAD sing 74 n n 
O5B C5B FAD sing 75 n n 
C5B C4B FAD sing 76 n n 
C5B H51A FAD sing 77 n n 
C5B H52A FAD sing 78 n n 
C4B O4B FAD sing 79 n n 
C4B C3B FAD sing 80 n n 
C4B H4B FAD sing 81 n n 
O4B C1B FAD sing 82 n n 
C3B O3B FAD sing 83 n n 
C3B C2B FAD sing 84 n n 
C3B H3B FAD sing 85 n n 
O3B HO3A FAD sing 86 n n 
C2B O2B FAD sing 87 n n 
C2B C1B FAD sing 88 n n 
C2B H2B FAD sing 89 n n 
O2B HO2A FAD sing 90 n n 
C1B N9A FAD sing 91 n n 
C1B H1B FAD sing 92 n n 
N9A C8A FAD sing 93 n y 
N9A C4A FAD sing 94 n y 
C8A N7A FAD doub 95 n y 
C8A H8A FAD sing 96 n n 
N7A C5A FAD sing 97 n y 
C5A C6A FAD sing 98 n y 
C5A C4A FAD doub 99 n y 
C6A N6A FAD sing 100 n n 
C6A N1A FAD doub 101 n y 
N6A H61A FAD sing 102 n n 
N6A H62A FAD sing 103 n n 
N1A C2A FAD sing 104 n y 
C2A N3A FAD doub 105 n y 
C2A H2A FAD sing 106 n n 
N3A C4A FAD sing 107 n y 
N1 C2 FAD sing 108 n n 
N1 C10 FAD doub 109 n n 
C2 O2 FAD doub 110 n n 
C2 N3 FAD sing 111 n n 
N3 C4 FAD sing 112 n n 
N3 HN3 FAD sing 113 n n 
C4 O4 FAD doub 114 n n 
C4 C4X FAD sing 115 n n 
C4X N5 FAD doub 116 n n 
C4X C10 FAD sing 117 n n 
N5 C5X FAD sing 118 n n 
C5X C6 FAD doub 119 n y 
C5X C9A FAD sing 120 n y 
C6 C7 FAD sing 121 n y 
C6 H6 FAD sing 122 n n 
C7 C7M FAD sing 123 n n 
C7 C8 FAD doub 124 n y 
C7M HM71 FAD sing 125 n n 
C7M HM72 FAD sing 126 n n 
C7M HM73 FAD sing 127 n n 
C8 C8M FAD sing 128 n n 
C8 C9 FAD sing 129 n y 
C8M HM81 FAD sing 130 n n 
C8M HM82 FAD sing 131 n n 
C8M HM83 FAD sing 132 n n 
C9 C9A FAD doub 133 n y 
C9 H9 FAD sing 134 n n 
C9A N10 FAD sing 135 n n 
N10 C10 FAD sing 136 n n 
N10 C1' FAD sing 137 n n 
C1' C2' FAD sing 138 n n 
C1' "H1'1" FAD sing 139 n n 
C1' "H1'2" FAD sing 140 n n 
C2' O2' FAD sing 141 n n 
C2' C3' FAD sing 142 n n 
C2' H2' FAD sing 143 n n 
O2' HO2' FAD sing 144 n n 
C3' O3' FAD sing 145 n n 
C3' C4' FAD sing 146 n n 
C3' H3' FAD sing 147 n n 
O3' HO3' FAD sing 148 n n 
C4' O4' FAD sing 149 n n 
C4' C5' FAD sing 150 n n 
C4' H4' FAD sing 151 n n 
O4' HO4' FAD sing 152 n n 
C5' O5' FAD sing 153 n n 
C5' "H5'1" FAD sing 154 n n 
C5' "H5'2" FAD sing 155 n n 
O5' P FAD sing 156 n n 
P O1P FAD doub 157 n n 
P O2P FAD sing 158 n n 
P O3P FAD sing 159 n n 
O2P HOP2 FAD sing 160 n n 
#
_atom_sites.entry_id                     4GAV 
_atom_sites.fract_transf_matrix[1][1]    0.015246 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008934 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006041 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 601 601 FAD FAD . 
D 3 UQ2 A 1 602 602 UQ2 UQ2 . 
E 2 FAD B 1 601 601 FAD FAD . 
F 3 UQ2 B 1 602 602 UQ2 UQ2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 -14.574 -19.846 19.114 1 65.81 ? PA FAD 601 B 1 
HETATM 2 O O1A FAD . . . E 2 -13.093 -19.913 19.4 1 62.1 ? O1A FAD 601 B 1 
HETATM 3 O O2A FAD . . . E 2 -15.479 -20.94 19.617 1 69.52 ? O2A FAD 601 B 1 
HETATM 4 O O5B FAD . . . E 2 -15.151 -18.447 19.638 1 62.51 ? O5B FAD 601 B 1 
HETATM 5 C C5B FAD . . . E 2 -16.462 -18.054 19.283 1 62.16 ? C5B FAD 601 B 1 
HETATM 6 C C4B FAD . . . E 2 -16.789 -16.87 20.171 1 65.37 ? C4B FAD 601 B 1 
HETATM 7 O O4B FAD . . . E 2 -17.994 -16.227 19.772 1 66.74 ? O4B FAD 601 B 1 
HETATM 8 C C3B FAD . . . E 2 -16.972 -17.284 21.615 1 67.62 ? C3B FAD 601 B 1 
HETATM 9 O O3B FAD . . . E 2 -16.107 -16.476 22.412 1 66.75 ? O3B FAD 601 B 1 
HETATM 10 C C2B FAD . . . E 2 -18.443 -17.059 21.922 1 70.45 ? C2B FAD 601 B 1 
HETATM 11 O O2B FAD . . . E 2 -18.676 -16.56 23.244 1 74.76 ? O2B FAD 601 B 1 
HETATM 12 C C1B FAD . . . E 2 -18.859 -16.032 20.889 1 72.8 ? C1B FAD 601 B 1 
HETATM 13 N N9A FAD . . . E 2 -20.263 -16.13 20.416 1 77.98 ? N9A FAD 601 B 1 
HETATM 14 C C8A FAD . . . E 2 -21.026 -17.228 20.313 1 80.14 ? C8A FAD 601 B 1 
HETATM 15 N N7A FAD . . . E 2 -22.249 -16.91 19.813 1 85.88 ? N7A FAD 601 B 1 
HETATM 16 C C5A FAD . . . E 2 -22.271 -15.591 19.579 1 83.55 ? C5A FAD 601 B 1 
HETATM 17 C C6A FAD . . . E 2 -23.242 -14.612 19.052 1 87.47 ? C6A FAD 601 B 1 
HETATM 18 N N6A FAD . . . E 2 -24.479 -14.999 18.668 1 93.36 ? N6A FAD 601 B 1 
HETATM 19 N N1A FAD . . . E 2 -22.861 -13.321 18.968 1 88.4 ? N1A FAD 601 B 1 
HETATM 20 C C2A FAD . . . E 2 -21.633 -12.917 19.343 1 89.29 ? C2A FAD 601 B 1 
HETATM 21 N N3A FAD . . . E 2 -20.706 -13.761 19.83 1 86.73 ? N3A FAD 601 B 1 
HETATM 22 C C4A FAD . . . E 2 -20.96 -15.084 19.973 1 82.59 ? C4A FAD 601 B 1 
HETATM 23 N N1 FAD . . . E 2 -8.321 -26.876 18.052 1 67.66 ? N1 FAD 601 B 1 
HETATM 24 C C2 FAD . . . E 2 -6.987 -27.176 17.997 1 70.44 ? C2 FAD 601 B 1 
HETATM 25 O O2 FAD . . . E 2 -6.306 -26.793 17.021 1 71.49 ? O2 FAD 601 B 1 
HETATM 26 N N3 FAD . . . E 2 -6.35 -27.875 18.954 1 70.49 ? N3 FAD 601 B 1 
HETATM 27 C C4 FAD . . . E 2 -6.986 -28.34 20.034 1 69.76 ? C4 FAD 601 B 1 
HETATM 28 O O4 FAD . . . E 2 -6.376 -28.987 20.911 1 72.04 ? O4 FAD 601 B 1 
HETATM 29 C C4X FAD . . . E 2 -8.431 -28.068 20.174 1 68.08 ? C4X FAD 601 B 1 
HETATM 30 N N5 FAD . . . E 2 -9.112 -28.514 21.246 1 65.27 ? N5 FAD 601 B 1 
HETATM 31 C C5X FAD . . . E 2 -10.43 -28.263 21.38 1 63.11 ? C5X FAD 601 B 1 
HETATM 32 C C6 FAD . . . E 2 -11.073 -28.744 22.514 1 63.41 ? C6 FAD 601 B 1 
HETATM 33 C C7 FAD . . . E 2 -12.423 -28.514 22.71 1 63.27 ? C7 FAD 601 B 1 
HETATM 34 C C7M FAD . . . E 2 -13.119 -29.041 23.936 1 63.11 ? C7M FAD 601 B 1 
HETATM 35 C C8 FAD . . . E 2 -13.179 -27.753 21.694 1 66.49 ? C8 FAD 601 B 1 
HETATM 36 C C8M FAD . . . E 2 -14.652 -27.508 21.9 1 69.33 ? C8M FAD 601 B 1 
HETATM 37 C C9 FAD . . . E 2 -12.536 -27.264 20.552 1 68.22 ? C9 FAD 601 B 1 
HETATM 38 C C9A FAD . . . E 2 -11.171 -27.484 20.344 1 64.73 ? C9A FAD 601 B 1 
HETATM 39 N N10 FAD . . . E 2 -10.471 -26.994 19.198 1 65.51 ? N10 FAD 601 B 1 
HETATM 40 C C10 FAD . . . E 2 -9.089 -27.286 19.093 1 67.75 ? C10 FAD 601 B 1 
HETATM 41 C C1' FAD . . . E 2 -11.124 -26.236 18.119 1 63.75 ? C1' FAD 601 B 1 
HETATM 42 C C2' FAD . . . E 2 -11.165 -24.741 18.403 1 65.44 ? C2' FAD 601 B 1 
HETATM 43 O O2' FAD . . . E 2 -11.53 -24.507 19.769 1 62.4 ? O2' FAD 601 B 1 
HETATM 44 C C3' FAD . . . E 2 -12.172 -24.031 17.491 1 66.09 ? C3' FAD 601 B 1 
HETATM 45 O O3' FAD . . . E 2 -12.035 -24.508 16.15 1 62.19 ? O3' FAD 601 B 1 
HETATM 46 C C4' FAD . . . E 2 -11.992 -22.511 17.553 1 68.23 ? C4' FAD 601 B 1 
HETATM 47 O O4' FAD . . . E 2 -12.399 -22.087 18.861 1 69.19 ? O4' FAD 601 B 1 
HETATM 48 C C5' FAD . . . E 2 -12.796 -21.752 16.492 1 66.57 ? C5' FAD 601 B 1 
HETATM 49 O O5' FAD . . . E 2 -12.5 -20.355 16.52 1 62.79 ? O5' FAD 601 B 1 
HETATM 50 P P FAD . . . E 2 -13.694 -19.275 16.436 1 72.67 ? P FAD 601 B 1 
HETATM 51 O O1P FAD . . . E 2 -13.152 -17.939 16.938 1 71.38 ? O1P FAD 601 B 1 
HETATM 52 O O2P FAD . . . E 2 -14.391 -19.403 15.09 1 65.26 ? O2P FAD 601 B 1 
HETATM 53 O O3P FAD . . . E 2 -14.813 -19.739 17.516 1 72.43 ? O3P FAD 601 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           53 
#