data_4GB1 # _model_server_result.job_id fDCFpbXtCZUiERuXqADp1g _model_server_result.datetime_utc '2024-10-13 04:19:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4GB1 # _exptl.entry_id 4GB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4GB1 _cell.length_a 90.501 _cell.length_b 90.501 _cell.length_c 108.731 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 92 1_555 A SG CYS 337 A CYS 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 42 A CYS 124 1_555 A SG CYS 47 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 102 A CYS 185 1_555 A SG CYS 149 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 151 A CYS 234 1_555 A SG CYS 156 A CYS 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 197 A CYS 280 1_555 A SG CYS 210 A CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? disulf ? disulf6 A SG CYS 199 A CYS 282 1_555 A SG CYS 208 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 A SG CYS 236 A CYS 320 1_555 A SG CYS 255 A CYS 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 A SG CYS 341 A CYS 431 1_555 A SG CYS 366 A CYS 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A O ASP 212 A ASP 295 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc2 A O GLY 216 A GLY 299 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.053 ? metalc ? metalc3 A OD1 ASP 242 A ASP 326 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc4 A O TYR 264 A TYR 352 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4GB1 _atom_sites.fract_transf_matrix[1][1] 0.01105 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01105 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0LP A 1 501 1 0LP DRG . C 3 CA A 1 502 1 CA CA . D 4 HOH A 1 601 1 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 4 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 6 HOH HOH . D 4 HOH A 7 607 7 HOH HOH . D 4 HOH A 8 608 8 HOH HOH . D 4 HOH A 9 609 9 HOH HOH . D 4 HOH A 10 610 10 HOH HOH . D 4 HOH A 11 611 11 HOH HOH . D 4 HOH A 12 612 12 HOH HOH . D 4 HOH A 13 613 13 HOH HOH . D 4 HOH A 14 614 14 HOH HOH . D 4 HOH A 15 615 15 HOH HOH . D 4 HOH A 16 616 16 HOH HOH . D 4 HOH A 17 617 17 HOH HOH . D 4 HOH A 18 618 18 HOH HOH . D 4 HOH A 19 619 19 HOH HOH . D 4 HOH A 20 620 20 HOH HOH . D 4 HOH A 21 621 21 HOH HOH . D 4 HOH A 22 622 22 HOH HOH . D 4 HOH A 23 623 23 HOH HOH . D 4 HOH A 24 624 24 HOH HOH . D 4 HOH A 25 625 25 HOH HOH . D 4 HOH A 26 626 26 HOH HOH . D 4 HOH A 27 627 27 HOH HOH . D 4 HOH A 28 628 28 HOH HOH . D 4 HOH A 29 629 29 HOH HOH . D 4 HOH A 30 630 30 HOH HOH . D 4 HOH A 31 631 31 HOH HOH . D 4 HOH A 32 632 32 HOH HOH . D 4 HOH A 33 633 33 HOH HOH . D 4 HOH A 34 634 34 HOH HOH . D 4 HOH A 35 635 35 HOH HOH . D 4 HOH A 36 636 36 HOH HOH . D 4 HOH A 37 637 37 HOH HOH . D 4 HOH A 38 638 38 HOH HOH . D 4 HOH A 39 639 39 HOH HOH . D 4 HOH A 40 640 40 HOH HOH . D 4 HOH A 41 641 41 HOH HOH . D 4 HOH A 42 642 42 HOH HOH . D 4 HOH A 43 643 43 HOH HOH . D 4 HOH A 44 644 44 HOH HOH . D 4 HOH A 45 645 45 HOH HOH . D 4 HOH A 46 646 46 HOH HOH . D 4 HOH A 47 647 48 HOH HOH . D 4 HOH A 48 648 49 HOH HOH . D 4 HOH A 49 649 50 HOH HOH . D 4 HOH A 50 650 51 HOH HOH . D 4 HOH A 51 651 52 HOH HOH . D 4 HOH A 52 652 53 HOH HOH . D 4 HOH A 53 653 54 HOH HOH . D 4 HOH A 54 654 55 HOH HOH . D 4 HOH A 55 655 56 HOH HOH . D 4 HOH A 56 656 57 HOH HOH . D 4 HOH A 57 657 58 HOH HOH . D 4 HOH A 58 658 59 HOH HOH . D 4 HOH A 59 659 60 HOH HOH . D 4 HOH A 60 660 61 HOH HOH . D 4 HOH A 61 661 62 HOH HOH . D 4 HOH A 62 662 63 HOH HOH . D 4 HOH A 63 663 64 HOH HOH . D 4 HOH A 64 664 65 HOH HOH . D 4 HOH A 65 665 66 HOH HOH . D 4 HOH A 66 666 67 HOH HOH . D 4 HOH A 67 667 68 HOH HOH . D 4 HOH A 68 668 69 HOH HOH . D 4 HOH A 69 669 70 HOH HOH . D 4 HOH A 70 670 71 HOH HOH . D 4 HOH A 71 671 72 HOH HOH . D 4 HOH A 72 672 73 HOH HOH . D 4 HOH A 73 673 74 HOH HOH . D 4 HOH A 74 674 75 HOH HOH . D 4 HOH A 75 675 76 HOH HOH . D 4 HOH A 76 676 77 HOH HOH . D 4 HOH A 77 677 78 HOH HOH . D 4 HOH A 78 678 79 HOH HOH . D 4 HOH A 79 679 80 HOH HOH . D 4 HOH A 80 680 81 HOH HOH . D 4 HOH A 81 681 82 HOH HOH . D 4 HOH A 82 682 83 HOH HOH . D 4 HOH A 83 683 84 HOH HOH . D 4 HOH A 84 684 85 HOH HOH . D 4 HOH A 85 685 86 HOH HOH . D 4 HOH A 86 686 87 HOH HOH . D 4 HOH A 87 687 88 HOH HOH . D 4 HOH A 88 688 89 HOH HOH . D 4 HOH A 89 689 90 HOH HOH . D 4 HOH A 90 690 91 HOH HOH . D 4 HOH A 91 691 92 HOH HOH . D 4 HOH A 92 692 93 HOH HOH . D 4 HOH A 93 693 94 HOH HOH . D 4 HOH A 94 694 95 HOH HOH . D 4 HOH A 95 695 96 HOH HOH . D 4 HOH A 96 696 97 HOH HOH . D 4 HOH A 97 697 98 HOH HOH . D 4 HOH A 98 698 99 HOH HOH . D 4 HOH A 99 699 100 HOH HOH . D 4 HOH A 100 700 101 HOH HOH . D 4 HOH A 101 701 102 HOH HOH . D 4 HOH A 102 702 103 HOH HOH . D 4 HOH A 103 703 104 HOH HOH . D 4 HOH A 104 704 105 HOH HOH . D 4 HOH A 105 705 106 HOH HOH . D 4 HOH A 106 706 107 HOH HOH . D 4 HOH A 107 707 108 HOH HOH . D 4 HOH A 108 708 109 HOH HOH . D 4 HOH A 109 709 110 HOH HOH . D 4 HOH A 110 710 111 HOH HOH . D 4 HOH A 111 711 112 HOH HOH . D 4 HOH A 112 712 113 HOH HOH . D 4 HOH A 113 713 114 HOH HOH . D 4 HOH A 114 714 115 HOH HOH . D 4 HOH A 115 715 116 HOH HOH . D 4 HOH A 116 716 117 HOH HOH . D 4 HOH A 117 717 118 HOH HOH . D 4 HOH A 118 718 119 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -31.633 _atom_site.Cartn_y 26.217 _atom_site.Cartn_z 8.475 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #