data_4GC0 # _model_server_result.job_id XXpZgAWuM_i3810OgdtZsQ _model_server_result.datetime_utc '2024-11-23 10:58:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gc0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4GC0 # _exptl.entry_id 4GC0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.053 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-bromo-6-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4GC0 _cell.length_a 95.171 _cell.length_b 95.171 _cell.length_c 171.668 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GC0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H11 Br O5' _chem_comp.formula_weight 243.053 _chem_comp.id 6BG _chem_comp.mon_nstd_flag . _chem_comp.name 6-bromo-6-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms 6-bromo-6-deoxy-beta-D-glucose;6-bromo-6-deoxy-D-glucose;6-bromo-6-deoxy-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 6BG sing 1 n n O2 C2 6BG sing 2 n n C3 C2 6BG sing 3 n n C3 C4 6BG sing 4 n n O4 C4 6BG sing 5 n n C2 C1 6BG sing 6 n n C4 C5 6BG sing 7 n n C1 O1 6BG sing 8 n n C1 O5 6BG sing 9 n n C5 O5 6BG sing 10 n n C5 C6 6BG sing 11 n n C6 BR6 6BG sing 12 n n C6 H61 6BG sing 13 n n C6 H62 6BG sing 14 n n C5 H5 6BG sing 15 n n C1 H1 6BG sing 16 n n O1 HO1 6BG sing 17 n n C4 H4 6BG sing 18 n n O4 HO4 6BG sing 19 n n C3 H3 6BG sing 20 n n O3 HO3 6BG sing 21 n n C2 H2 6BG sing 22 n n O2 HO2 6BG sing 23 n n # _pdbx_chem_comp_identifier.comp_id 6BG _pdbx_chem_comp_identifier.identifier b-D-Glcp6bromo _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 4GC0 _atom_sites.fract_transf_matrix[1][1] 0.010507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6BG A 1 501 1 6BG 6BG . C 3 BNG A 1 502 1 BNG BNG . D 3 BNG A 1 503 2 BNG BNG . E 3 BNG A 1 504 3 BNG BNG . F 3 BNG A 1 505 4 BNG BNG . G 4 HOH A 1 601 1 HOH HOH . G 4 HOH A 2 602 2 HOH HOH . G 4 HOH A 3 603 3 HOH HOH . G 4 HOH A 4 604 4 HOH HOH . G 4 HOH A 5 605 5 HOH HOH . G 4 HOH A 6 606 6 HOH HOH . G 4 HOH A 7 607 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR6 6BG . . . B 2 -29.173 24.885 1.857 1 107.82 ? BR6 6BG 501 A 1 HETATM 2 C C6 6BG . . . B 2 -30.104 25.412 0.193 1 106.62 ? C6 6BG 501 A 1 HETATM 3 C C5 6BG . . . B 2 -29.821 24.315 -0.781 1 106.35 ? C5 6BG 501 A 1 HETATM 4 O O5 6BG . . . B 2 -30.446 23.172 -0.27 1 106.03 ? O5 6BG 501 A 1 HETATM 5 C C1 6BG . . . B 2 -30.241 22.108 -1.137 1 105.97 ? C1 6BG 501 A 1 HETATM 6 O O1 6BG . . . B 2 -30.885 20.973 -0.647 1 105.94 ? O1 6BG 501 A 1 HETATM 7 C C4 6BG . . . B 2 -30.332 24.692 -2.143 1 105.62 ? C4 6BG 501 A 1 HETATM 8 O O4 6BG . . . B 2 -29.324 25.51 -2.674 1 105.95 ? O4 6BG 501 A 1 HETATM 9 C C3 6BG . . . B 2 -30.418 23.52 -3.061 1 105.33 ? C3 6BG 501 A 1 HETATM 10 O O3 6BG . . . B 2 -31.225 23.802 -4.173 1 104.66 ? O3 6BG 501 A 1 HETATM 11 C C2 6BG . . . B 2 -31.069 22.42 -2.314 1 105.32 ? C2 6BG 501 A 1 HETATM 12 O O2 6BG . . . B 2 -31.026 21.248 -3.081 1 105.48 ? O2 6BG 501 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #