data_4GEJ # _model_server_result.job_id h1HEU3lljOxL43GhgSmQoA _model_server_result.datetime_utc '2024-10-22 23:25:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gej # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":201}' # _entry.id 4GEJ # _exptl.entry_id 4GEJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.32 _cell.angle_gamma 90 _cell.entry_id 4GEJ _cell.length_a 79.74 _cell.length_b 178.81 _cell.length_c 81.89 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GEJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 ? monomeric 1 author_defined_assembly 9 ? monomeric 1 author_defined_assembly 10 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,K 1 1 B 2 1 C,L 3 1 D,M 4 1 E 5 1 F 6 1 G 7 1 H,N 8 1 I,O 9 1 J 10 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 64 A CYS 63 1_555 B SG CYS 64 B CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? disulf ? disulf2 C SG CYS 64 C CYS 63 1_555 D SG CYS 64 D CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf3 E SG CYS 64 E CYS 63 1_555 F SG CYS 64 F CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? disulf ? disulf4 G SG CYS 64 G CYS 63 1_555 H SG CYS 64 H CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? disulf ? disulf5 I SG CYS 64 I CYS 63 1_555 J SG CYS 64 J CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc1 D O THR 76 D THR 75 1_555 M CA CA . D CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc2 A O THR 76 A THR 75 1_555 K CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc3 J O THR 76 J THR 75 1_555 L CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc4 E O THR 76 E THR 75 1_555 N CA CA . H CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc5 E OD1 ASP 75 E ASP 74 1_555 N CA CA . H CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 H O THR 76 H THR 75 1_555 N CA CA . H CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc7 B O THR 76 B THR 75 1_555 M CA CA . D CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc8 C O THR 76 C THR 75 1_555 L CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 I O THR 76 I THR 75 1_555 O CA CA . I CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc10 D OD1 ASP 75 D ASP 74 1_555 M CA CA . D CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc11 F O THR 76 F THR 75 1_555 K CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc12 C OD1 ASP 75 C ASP 74 1_555 L CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc13 H OD1 ASP 75 H ASP 74 1_555 N CA CA . H CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc14 I OD1 ASP 75 I ASP 74 1_555 O CA CA . I CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc15 J OD1 ASP 75 J ASP 74 1_555 L CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc16 B OD1 ASP 75 B ASP 74 1_555 M CA CA . D CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc17 F OD1 ASP 75 F ASP 74 1_555 K CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc18 A OD2 ASP 75 A ASP 74 1_555 K CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4GEJ _atom_sites.fract_transf_matrix[1][1] 0.012541 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005406 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 CA A 1 201 1 CA CA . L 2 CA C 1 201 1 CA CA . M 2 CA D 1 201 1 CA CA . N 2 CA H 1 201 1 CA CA . O 2 CA I 1 201 1 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 2 _atom_site.Cartn_x 53.186 _atom_site.Cartn_y 23.509 _atom_site.Cartn_z 17.239 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #