data_4GEQ
#
_model_server_result.job_id            FXVzWg02MbMVnFMgjNRcDA 
_model_server_result.datetime_utc      '2024-11-21 18:24:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4geq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    4GEQ 
#
_exptl.entry_id    4GEQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4GEQ 
_cell.length_a            34.142 
_cell.length_b            61.848 
_cell.length_c            139.056 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4GEQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,F,G,I,J,N 1 1 
C,D,E,H,K,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4GEQ 
_atom_sites.fract_transf_matrix[1][1]    0.029289 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016169 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007191 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 GOL B 1 301 1 GOL GOL . 
H 4 GOL C 1 301 1 GOL GOL . 
I 5 HOH A 1 301 3 HOH HOH . 
I 5 HOH A 2 302 5 HOH HOH . 
I 5 HOH A 3 303 7 HOH HOH . 
I 5 HOH A 4 304 12 HOH HOH . 
I 5 HOH A 5 305 16 HOH HOH . 
I 5 HOH A 6 306 17 HOH HOH . 
I 5 HOH A 7 307 23 HOH HOH . 
I 5 HOH A 8 308 29 HOH HOH . 
I 5 HOH A 9 309 30 HOH HOH . 
I 5 HOH A 10 310 32 HOH HOH . 
I 5 HOH A 11 311 38 HOH HOH . 
I 5 HOH A 12 312 47 HOH HOH . 
I 5 HOH A 13 313 49 HOH HOH . 
I 5 HOH A 14 314 51 HOH HOH . 
I 5 HOH A 15 315 52 HOH HOH . 
I 5 HOH A 16 316 55 HOH HOH . 
I 5 HOH A 17 317 56 HOH HOH . 
I 5 HOH A 18 318 57 HOH HOH . 
I 5 HOH A 19 319 60 HOH HOH . 
I 5 HOH A 20 320 62 HOH HOH . 
I 5 HOH A 21 321 63 HOH HOH . 
I 5 HOH A 22 322 64 HOH HOH . 
I 5 HOH A 23 323 66 HOH HOH . 
I 5 HOH A 24 324 71 HOH HOH . 
I 5 HOH A 25 325 74 HOH HOH . 
I 5 HOH A 26 326 75 HOH HOH . 
I 5 HOH A 27 327 76 HOH HOH . 
I 5 HOH A 28 328 79 HOH HOH . 
I 5 HOH A 29 329 80 HOH HOH . 
I 5 HOH A 30 330 81 HOH HOH . 
I 5 HOH A 31 331 85 HOH HOH . 
I 5 HOH A 32 332 86 HOH HOH . 
I 5 HOH A 33 333 88 HOH HOH . 
I 5 HOH A 34 334 89 HOH HOH . 
I 5 HOH A 35 335 90 HOH HOH . 
I 5 HOH A 36 336 94 HOH HOH . 
I 5 HOH A 37 337 102 HOH HOH . 
I 5 HOH A 38 338 106 HOH HOH . 
I 5 HOH A 39 339 110 HOH HOH . 
I 5 HOH A 40 340 113 HOH HOH . 
I 5 HOH A 41 341 114 HOH HOH . 
I 5 HOH A 42 342 115 HOH HOH . 
I 5 HOH A 43 343 118 HOH HOH . 
I 5 HOH A 44 344 120 HOH HOH . 
I 5 HOH A 45 345 125 HOH HOH . 
I 5 HOH A 46 346 127 HOH HOH . 
I 5 HOH A 47 347 129 HOH HOH . 
I 5 HOH A 48 348 134 HOH HOH . 
I 5 HOH A 49 349 136 HOH HOH . 
I 5 HOH A 50 350 137 HOH HOH . 
I 5 HOH A 51 351 139 HOH HOH . 
I 5 HOH A 52 352 141 HOH HOH . 
I 5 HOH A 53 353 143 HOH HOH . 
I 5 HOH A 54 354 148 HOH HOH . 
I 5 HOH A 55 355 152 HOH HOH . 
J 5 HOH B 1 401 41 HOH HOH . 
J 5 HOH B 2 402 19 HOH HOH . 
J 5 HOH B 3 403 31 HOH HOH . 
J 5 HOH B 4 404 34 HOH HOH . 
J 5 HOH B 5 405 50 HOH HOH . 
J 5 HOH B 6 406 53 HOH HOH . 
J 5 HOH B 7 407 61 HOH HOH . 
J 5 HOH B 8 408 68 HOH HOH . 
J 5 HOH B 9 409 73 HOH HOH . 
J 5 HOH B 10 410 84 HOH HOH . 
J 5 HOH B 11 411 92 HOH HOH . 
J 5 HOH B 12 412 93 HOH HOH . 
J 5 HOH B 13 413 100 HOH HOH . 
J 5 HOH B 14 414 107 HOH HOH . 
J 5 HOH B 15 415 117 HOH HOH . 
J 5 HOH B 16 416 123 HOH HOH . 
J 5 HOH B 17 417 126 HOH HOH . 
J 5 HOH B 18 418 128 HOH HOH . 
J 5 HOH B 19 419 130 HOH HOH . 
J 5 HOH B 20 420 146 HOH HOH . 
K 5 HOH C 1 401 1 HOH HOH . 
K 5 HOH C 2 402 2 HOH HOH . 
K 5 HOH C 3 403 4 HOH HOH . 
K 5 HOH C 4 404 6 HOH HOH . 
K 5 HOH C 5 405 8 HOH HOH . 
K 5 HOH C 6 406 9 HOH HOH . 
K 5 HOH C 7 407 10 HOH HOH . 
K 5 HOH C 8 408 13 HOH HOH . 
K 5 HOH C 9 409 15 HOH HOH . 
K 5 HOH C 10 410 18 HOH HOH . 
K 5 HOH C 11 411 20 HOH HOH . 
K 5 HOH C 12 412 24 HOH HOH . 
K 5 HOH C 13 413 25 HOH HOH . 
K 5 HOH C 14 414 28 HOH HOH . 
K 5 HOH C 15 415 33 HOH HOH . 
K 5 HOH C 16 416 36 HOH HOH . 
K 5 HOH C 17 417 40 HOH HOH . 
K 5 HOH C 18 418 42 HOH HOH . 
K 5 HOH C 19 419 43 HOH HOH . 
K 5 HOH C 20 420 44 HOH HOH . 
K 5 HOH C 21 421 46 HOH HOH . 
K 5 HOH C 22 422 48 HOH HOH . 
K 5 HOH C 23 423 54 HOH HOH . 
K 5 HOH C 24 424 58 HOH HOH . 
K 5 HOH C 25 425 59 HOH HOH . 
K 5 HOH C 26 426 67 HOH HOH . 
K 5 HOH C 27 427 69 HOH HOH . 
K 5 HOH C 28 428 72 HOH HOH . 
K 5 HOH C 29 429 83 HOH HOH . 
K 5 HOH C 30 430 87 HOH HOH . 
K 5 HOH C 31 431 91 HOH HOH . 
K 5 HOH C 32 432 95 HOH HOH . 
K 5 HOH C 33 433 96 HOH HOH . 
K 5 HOH C 34 434 97 HOH HOH . 
K 5 HOH C 35 435 99 HOH HOH . 
K 5 HOH C 36 436 101 HOH HOH . 
K 5 HOH C 37 437 112 HOH HOH . 
K 5 HOH C 38 438 119 HOH HOH . 
K 5 HOH C 39 439 124 HOH HOH . 
K 5 HOH C 40 440 131 HOH HOH . 
K 5 HOH C 41 441 133 HOH HOH . 
K 5 HOH C 42 442 135 HOH HOH . 
K 5 HOH C 43 443 138 HOH HOH . 
K 5 HOH C 44 444 140 HOH HOH . 
K 5 HOH C 45 445 145 HOH HOH . 
K 5 HOH C 46 446 147 HOH HOH . 
K 5 HOH C 47 447 151 HOH HOH . 
L 5 HOH D 1 301 11 HOH HOH . 
L 5 HOH D 2 302 14 HOH HOH . 
L 5 HOH D 3 303 21 HOH HOH . 
L 5 HOH D 4 304 22 HOH HOH . 
L 5 HOH D 5 305 26 HOH HOH . 
L 5 HOH D 6 306 35 HOH HOH . 
L 5 HOH D 7 307 45 HOH HOH . 
L 5 HOH D 8 308 65 HOH HOH . 
L 5 HOH D 9 309 70 HOH HOH . 
L 5 HOH D 10 310 77 HOH HOH . 
L 5 HOH D 11 311 82 HOH HOH . 
L 5 HOH D 12 312 103 HOH HOH . 
L 5 HOH D 13 313 105 HOH HOH . 
L 5 HOH D 14 314 109 HOH HOH . 
L 5 HOH D 15 315 116 HOH HOH . 
L 5 HOH D 16 316 142 HOH HOH . 
L 5 HOH D 17 317 149 HOH HOH . 
M 5 HOH E 1 101 27 HOH HOH . 
M 5 HOH E 2 102 78 HOH HOH . 
M 5 HOH E 3 103 98 HOH HOH . 
M 5 HOH E 4 104 111 HOH HOH . 
M 5 HOH E 5 105 132 HOH HOH . 
M 5 HOH E 6 106 144 HOH HOH . 
N 5 HOH F 1 101 37 HOH HOH . 
N 5 HOH F 2 102 39 HOH HOH . 
N 5 HOH F 3 103 104 HOH HOH . 
N 5 HOH F 4 104 108 HOH HOH . 
N 5 HOH F 5 105 150 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 4 10.745 6.627 16.544 1 51.3 ? C1 GOL 301 B 1 
HETATM 2 O O1 GOL . . . G 4 10.823 5.242 16.203 1 49.36 ? O1 GOL 301 B 1 
HETATM 3 C C2 GOL . . . G 4 9.37 7.199 16.274 1 49.7 ? C2 GOL 301 B 1 
HETATM 4 O O2 GOL . . . G 4 8.376 6.226 16.597 1 48.2 ? O2 GOL 301 B 1 
HETATM 5 C C3 GOL . . . G 4 9.14 8.433 17.113 1 49.91 ? C3 GOL 301 B 1 
HETATM 6 O O3 GOL . . . G 4 9.427 9.613 16.378 1 52.48 ? O3 GOL 301 B 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           6 
#