data_4GEU # _model_server_result.job_id j--uiDOiWY0GAI7xQQ2GzQ _model_server_result.datetime_utc '2025-02-05 09:36:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4geu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 4GEU # _exptl.entry_id 4GEU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.43 _cell.angle_gamma 90 _cell.entry_id 4GEU _cell.length_a 70.58 _cell.length_b 74.04 _cell.length_c 81.07 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GEU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H 1 1 C,I 2 1 D,J 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 11.884942 0 -80.194096 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4GEU _atom_sites.fract_transf_matrix[1][1] 0.014168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0021 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 201 1 GOL GOL . F 3 PG4 A 1 202 1 PG4 PG4 . G 4 HOH A 1 301 1 HOH HOH . G 4 HOH A 2 302 10 HOH HOH . G 4 HOH A 3 303 12 HOH HOH . G 4 HOH A 4 304 17 HOH HOH . G 4 HOH A 5 305 18 HOH HOH . G 4 HOH A 6 306 24 HOH HOH . G 4 HOH A 7 307 26 HOH HOH . G 4 HOH A 8 308 30 HOH HOH . G 4 HOH A 9 309 34 HOH HOH . G 4 HOH A 10 310 37 HOH HOH . G 4 HOH A 11 311 40 HOH HOH . G 4 HOH A 12 312 47 HOH HOH . G 4 HOH A 13 313 56 HOH HOH . G 4 HOH A 14 314 10 HOH HOH . G 4 HOH A 15 315 3 HOH HOH . G 4 HOH A 16 316 7 HOH HOH . G 4 HOH A 17 317 8 HOH HOH . G 4 HOH A 18 318 10 HOH HOH . G 4 HOH A 19 319 12 HOH HOH . G 4 HOH A 20 320 14 HOH HOH . G 4 HOH A 21 321 18 HOH HOH . G 4 HOH A 22 322 22 HOH HOH . G 4 HOH A 23 323 35 HOH HOH . G 4 HOH A 24 324 38 HOH HOH . G 4 HOH A 25 325 41 HOH HOH . G 4 HOH A 26 326 42 HOH HOH . G 4 HOH A 27 327 43 HOH HOH . G 4 HOH A 28 328 44 HOH HOH . G 4 HOH A 29 329 48 HOH HOH . G 4 HOH A 30 330 56 HOH HOH . G 4 HOH A 31 331 61 HOH HOH . G 4 HOH A 32 332 63 HOH HOH . G 4 HOH A 33 333 68 HOH HOH . H 4 HOH B 1 201 13 HOH HOH . H 4 HOH B 2 202 27 HOH HOH . H 4 HOH B 3 203 28 HOH HOH . H 4 HOH B 4 204 31 HOH HOH . H 4 HOH B 5 205 42 HOH HOH . H 4 HOH B 6 206 44 HOH HOH . H 4 HOH B 7 207 49 HOH HOH . H 4 HOH B 8 208 57 HOH HOH . H 4 HOH B 9 209 9 HOH HOH . H 4 HOH B 10 210 12 HOH HOH . H 4 HOH B 11 211 5 HOH HOH . H 4 HOH B 12 212 6 HOH HOH . H 4 HOH B 13 213 20 HOH HOH . H 4 HOH B 14 214 21 HOH HOH . H 4 HOH B 15 215 25 HOH HOH . H 4 HOH B 16 216 26 HOH HOH . H 4 HOH B 17 217 33 HOH HOH . H 4 HOH B 18 218 34 HOH HOH . H 4 HOH B 19 219 36 HOH HOH . H 4 HOH B 20 220 45 HOH HOH . H 4 HOH B 21 221 53 HOH HOH . H 4 HOH B 22 222 58 HOH HOH . H 4 HOH B 23 223 66 HOH HOH . I 4 HOH C 1 201 2 HOH HOH . I 4 HOH C 2 202 5 HOH HOH . I 4 HOH C 3 203 7 HOH HOH . I 4 HOH C 4 204 9 HOH HOH . I 4 HOH C 5 205 11 HOH HOH . I 4 HOH C 6 206 14 HOH HOH . I 4 HOH C 7 207 15 HOH HOH . I 4 HOH C 8 208 20 HOH HOH . I 4 HOH C 9 209 21 HOH HOH . I 4 HOH C 10 210 22 HOH HOH . I 4 HOH C 11 211 23 HOH HOH . I 4 HOH C 12 212 33 HOH HOH . I 4 HOH C 13 213 35 HOH HOH . I 4 HOH C 14 214 36 HOH HOH . I 4 HOH C 15 215 39 HOH HOH . I 4 HOH C 16 216 43 HOH HOH . I 4 HOH C 17 217 45 HOH HOH . I 4 HOH C 18 218 46 HOH HOH . I 4 HOH C 19 219 48 HOH HOH . I 4 HOH C 20 220 11 HOH HOH . I 4 HOH C 21 221 1 HOH HOH . I 4 HOH C 22 222 9 HOH HOH . I 4 HOH C 23 223 15 HOH HOH . I 4 HOH C 24 224 16 HOH HOH . I 4 HOH C 25 225 17 HOH HOH . I 4 HOH C 26 226 19 HOH HOH . I 4 HOH C 27 227 23 HOH HOH . I 4 HOH C 28 228 24 HOH HOH . I 4 HOH C 29 229 31 HOH HOH . I 4 HOH C 30 230 39 HOH HOH . I 4 HOH C 31 231 46 HOH HOH . I 4 HOH C 32 232 49 HOH HOH . I 4 HOH C 33 233 51 HOH HOH . I 4 HOH C 34 234 52 HOH HOH . I 4 HOH C 35 235 55 HOH HOH . I 4 HOH C 36 236 57 HOH HOH . I 4 HOH C 37 237 60 HOH HOH . I 4 HOH C 38 238 64 HOH HOH . I 4 HOH C 39 239 65 HOH HOH . I 4 HOH C 40 240 70 HOH HOH . I 4 HOH C 41 241 72 HOH HOH . J 4 HOH D 1 201 1 HOH HOH . J 4 HOH D 2 202 2 HOH HOH . J 4 HOH D 3 203 3 HOH HOH . J 4 HOH D 4 204 4 HOH HOH . J 4 HOH D 5 205 6 HOH HOH . J 4 HOH D 6 206 8 HOH HOH . J 4 HOH D 7 207 19 HOH HOH . J 4 HOH D 8 208 29 HOH HOH . J 4 HOH D 9 209 38 HOH HOH . J 4 HOH D 10 210 52 HOH HOH . J 4 HOH D 11 211 2 HOH HOH . J 4 HOH D 12 212 3 HOH HOH . J 4 HOH D 13 213 4 HOH HOH . J 4 HOH D 14 214 5 HOH HOH . J 4 HOH D 15 215 6 HOH HOH . J 4 HOH D 16 216 7 HOH HOH . J 4 HOH D 17 217 8 HOH HOH . J 4 HOH D 18 218 2 HOH HOH . J 4 HOH D 19 219 4 HOH HOH . J 4 HOH D 20 220 11 HOH HOH . J 4 HOH D 21 221 13 HOH HOH . J 4 HOH D 22 222 27 HOH HOH . J 4 HOH D 23 223 28 HOH HOH . J 4 HOH D 24 224 29 HOH HOH . J 4 HOH D 25 225 30 HOH HOH . J 4 HOH D 26 226 32 HOH HOH . J 4 HOH D 27 227 37 HOH HOH . J 4 HOH D 28 228 40 HOH HOH . J 4 HOH D 29 229 47 HOH HOH . J 4 HOH D 30 230 50 HOH HOH . J 4 HOH D 31 231 54 HOH HOH . J 4 HOH D 32 232 59 HOH HOH . J 4 HOH D 33 233 62 HOH HOH . J 4 HOH D 34 234 67 HOH HOH . J 4 HOH D 35 235 69 HOH HOH . J 4 HOH D 36 236 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 39.509 13.727 34.345 1 103.23 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . E 2 39.629 13.56 32.933 1 102.91 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . E 2 40.86 13.725 35.029 1 102.84 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . E 2 40.75 14.332 36.328 1 99.63 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . E 2 41.412 12.323 35.173 1 103.5 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . E 2 42.049 11.895 33.973 1 103.07 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #