data_4GG7 # _model_server_result.job_id '_DvruWuCvc2AS6xtbidUrQ' _model_server_result.datetime_utc '2024-11-04 20:07:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gg7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 4GG7 # _exptl.entry_id 4GG7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 498.46 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-nitrobenzyl)-6-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-2-(trifluoromethyl)pyrido[2,3-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4GG7 _cell.length_a 65.867 _cell.length_b 65.867 _cell.length_c 187.176 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GG7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H21 F3 N8 O2' _chem_comp.formula_weight 498.46 _chem_comp.id 0J8 _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-nitrobenzyl)-6-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-2-(trifluoromethyl)pyrido[2,3-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAO NAW 0J8 sing 1 n n CAO CAQ 0J8 sing 2 n n NAW CAN 0J8 sing 3 n n CAQ CBG 0J8 sing 4 n n CAN CAP 0J8 sing 5 n n CBG CAP 0J8 sing 6 n n CBG NBI 0J8 sing 7 n n NAT NBI 0J8 sing 8 n y NAT CAJ 0J8 doub 9 n y NBI CAM 0J8 sing 10 n y CAJ CBA 0J8 sing 11 n y CAM CBA 0J8 doub 12 n y CBA CAZ 0J8 sing 13 n n CAZ CAI 0J8 doub 14 n y CAZ CAL 0J8 sing 15 n y CAI NAS 0J8 sing 16 n y CAL C5 0J8 doub 17 n y NAS C4 0J8 doub 18 n y C5 C4 0J8 sing 19 n y C5 C6 0J8 sing 20 n y C4 N3 0J8 sing 21 n y NAX C6 0J8 sing 22 n n NAX CAR 0J8 sing 23 n n C6 N1 0J8 doub 24 n y N3 C2 0J8 doub 25 n y CAR CAY 0J8 sing 26 n n N1 C2 0J8 sing 27 n y C2 CBJ 0J8 sing 28 n n FAE CBJ 0J8 sing 29 n n CAY CAG 0J8 doub 30 n y CAY CAK 0J8 sing 31 n y CAG CAF 0J8 sing 32 n y CBJ FAD 0J8 sing 33 n n CBJ FAC 0J8 sing 34 n n CAK CBB 0J8 doub 35 n y CAF CAH 0J8 doub 36 n y CBB CAH 0J8 sing 37 n y CBB NBH 0J8 sing 38 n n NBH OAA 0J8 doub 39 n n NBH OAB 0J8 sing 40 n n CAP H1 0J8 sing 41 n n CAP H2 0J8 sing 42 n n CAN H3 0J8 sing 43 n n CAN H4 0J8 sing 44 n n NAW H5 0J8 sing 45 n n CAO H7 0J8 sing 46 n n CAO H8 0J8 sing 47 n n CAQ H9 0J8 sing 48 n n CAQ H10 0J8 sing 49 n n CBG H11 0J8 sing 50 n n CAM H12 0J8 sing 51 n n CAJ H13 0J8 sing 52 n n CAL H14 0J8 sing 53 n n CAI H15 0J8 sing 54 n n NAX H16 0J8 sing 55 n n CAR H17 0J8 sing 56 n n CAR H18 0J8 sing 57 n n CAK H19 0J8 sing 58 n n CAG H20 0J8 sing 59 n n CAF H21 0J8 sing 60 n n CAH H22 0J8 sing 61 n n # _atom_sites.entry_id 4GG7 _atom_sites.fract_transf_matrix[1][1] 0.015182 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0J8 A 1 1401 1 0J8 DRG . C 3 HOH A 1 1501 1 HOH HOH . C 3 HOH A 2 1502 2 HOH HOH . C 3 HOH A 3 1503 3 HOH HOH . C 3 HOH A 4 1504 4 HOH HOH . C 3 HOH A 5 1505 5 HOH HOH . C 3 HOH A 6 1506 6 HOH HOH . C 3 HOH A 7 1507 7 HOH HOH . C 3 HOH A 8 1508 8 HOH HOH . C 3 HOH A 9 1509 9 HOH HOH . C 3 HOH A 10 1510 10 HOH HOH . C 3 HOH A 11 1511 11 HOH HOH . C 3 HOH A 12 1512 12 HOH HOH . C 3 HOH A 13 1513 13 HOH HOH . C 3 HOH A 14 1514 14 HOH HOH . C 3 HOH A 15 1515 15 HOH HOH . C 3 HOH A 16 1516 16 HOH HOH . C 3 HOH A 17 1517 17 HOH HOH . C 3 HOH A 18 1518 18 HOH HOH . C 3 HOH A 19 1519 19 HOH HOH . C 3 HOH A 20 1520 20 HOH HOH . C 3 HOH A 21 1521 21 HOH HOH . C 3 HOH A 22 1522 22 HOH HOH . C 3 HOH A 23 1523 23 HOH HOH . C 3 HOH A 24 1524 24 HOH HOH . C 3 HOH A 25 1525 25 HOH HOH . C 3 HOH A 26 1526 26 HOH HOH . C 3 HOH A 27 1527 27 HOH HOH . C 3 HOH A 28 1528 28 HOH HOH . C 3 HOH A 29 1529 29 HOH HOH . C 3 HOH A 30 1530 30 HOH HOH . C 3 HOH A 31 1531 31 HOH HOH . C 3 HOH A 32 1532 32 HOH HOH . C 3 HOH A 33 1533 33 HOH HOH . C 3 HOH A 34 1534 34 HOH HOH . C 3 HOH A 35 1535 35 HOH HOH . C 3 HOH A 36 1536 36 HOH HOH . C 3 HOH A 37 1537 37 HOH HOH . C 3 HOH A 38 1538 38 HOH HOH . C 3 HOH A 39 1539 39 HOH HOH . C 3 HOH A 40 1540 40 HOH HOH . C 3 HOH A 41 1541 41 HOH HOH . C 3 HOH A 42 1542 42 HOH HOH . C 3 HOH A 43 1543 43 HOH HOH . C 3 HOH A 44 1544 44 HOH HOH . C 3 HOH A 45 1545 45 HOH HOH . C 3 HOH A 46 1546 46 HOH HOH . C 3 HOH A 47 1547 47 HOH HOH . C 3 HOH A 48 1548 48 HOH HOH . C 3 HOH A 49 1549 49 HOH HOH . C 3 HOH A 50 1550 50 HOH HOH . C 3 HOH A 51 1551 51 HOH HOH . C 3 HOH A 52 1552 52 HOH HOH . C 3 HOH A 53 1553 53 HOH HOH . C 3 HOH A 54 1554 54 HOH HOH . C 3 HOH A 55 1555 55 HOH HOH . C 3 HOH A 56 1556 56 HOH HOH . C 3 HOH A 57 1557 57 HOH HOH . C 3 HOH A 58 1558 58 HOH HOH . C 3 HOH A 59 1559 59 HOH HOH . C 3 HOH A 60 1560 60 HOH HOH . C 3 HOH A 61 1561 61 HOH HOH . C 3 HOH A 62 1562 62 HOH HOH . C 3 HOH A 63 1563 63 HOH HOH . C 3 HOH A 64 1564 64 HOH HOH . C 3 HOH A 65 1565 65 HOH HOH . C 3 HOH A 66 1566 66 HOH HOH . C 3 HOH A 67 1567 67 HOH HOH . C 3 HOH A 68 1568 68 HOH HOH . C 3 HOH A 69 1569 69 HOH HOH . C 3 HOH A 70 1570 70 HOH HOH . C 3 HOH A 71 1571 71 HOH HOH . C 3 HOH A 72 1572 72 HOH HOH . C 3 HOH A 73 1573 73 HOH HOH . C 3 HOH A 74 1574 74 HOH HOH . C 3 HOH A 75 1575 75 HOH HOH . C 3 HOH A 76 1576 76 HOH HOH . C 3 HOH A 77 1577 77 HOH HOH . C 3 HOH A 78 1578 78 HOH HOH . C 3 HOH A 79 1579 79 HOH HOH . C 3 HOH A 80 1580 80 HOH HOH . C 3 HOH A 81 1581 81 HOH HOH . C 3 HOH A 82 1582 82 HOH HOH . C 3 HOH A 83 1583 83 HOH HOH . C 3 HOH A 84 1584 84 HOH HOH . C 3 HOH A 85 1585 85 HOH HOH . C 3 HOH A 86 1586 86 HOH HOH . C 3 HOH A 87 1587 87 HOH HOH . C 3 HOH A 88 1588 88 HOH HOH . C 3 HOH A 89 1589 89 HOH HOH . C 3 HOH A 90 1590 90 HOH HOH . C 3 HOH A 91 1591 91 HOH HOH . C 3 HOH A 92 1592 92 HOH HOH . C 3 HOH A 93 1593 93 HOH HOH . C 3 HOH A 94 1594 94 HOH HOH . C 3 HOH A 95 1595 95 HOH HOH . C 3 HOH A 96 1596 96 HOH HOH . C 3 HOH A 97 1597 97 HOH HOH . C 3 HOH A 98 1598 98 HOH HOH . C 3 HOH A 99 1599 99 HOH HOH . C 3 HOH A 100 1600 100 HOH HOH . C 3 HOH A 101 1601 101 HOH HOH . C 3 HOH A 102 1602 102 HOH HOH . C 3 HOH A 103 1603 103 HOH HOH . C 3 HOH A 104 1604 104 HOH HOH . C 3 HOH A 105 1605 105 HOH HOH . C 3 HOH A 106 1606 106 HOH HOH . C 3 HOH A 107 1607 107 HOH HOH . C 3 HOH A 108 1608 108 HOH HOH . C 3 HOH A 109 1609 109 HOH HOH . C 3 HOH A 110 1610 110 HOH HOH . C 3 HOH A 111 1611 111 HOH HOH . C 3 HOH A 112 1612 112 HOH HOH . C 3 HOH A 113 1613 113 HOH HOH . C 3 HOH A 114 1614 114 HOH HOH . C 3 HOH A 115 1615 115 HOH HOH . C 3 HOH A 116 1616 116 HOH HOH . C 3 HOH A 117 1617 117 HOH HOH . C 3 HOH A 118 1618 118 HOH HOH . C 3 HOH A 119 1619 119 HOH HOH . C 3 HOH A 120 1620 120 HOH HOH . C 3 HOH A 121 1621 121 HOH HOH . C 3 HOH A 122 1622 122 HOH HOH . C 3 HOH A 123 1623 123 HOH HOH . C 3 HOH A 124 1624 124 HOH HOH . C 3 HOH A 125 1625 125 HOH HOH . C 3 HOH A 126 1626 126 HOH HOH . C 3 HOH A 127 1627 127 HOH HOH . C 3 HOH A 128 1628 128 HOH HOH . C 3 HOH A 129 1629 129 HOH HOH . C 3 HOH A 130 1630 130 HOH HOH . C 3 HOH A 131 1631 131 HOH HOH . C 3 HOH A 132 1632 132 HOH HOH . C 3 HOH A 133 1633 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 0J8 . . . B 2 -1.134 -17.587 14.626 1 22.83 ? C4 0J8 1401 A 1 HETATM 2 C C5 0J8 . . . B 2 -2.183 -16.667 14.458 1 23.15 ? C5 0J8 1401 A 1 HETATM 3 C C6 0J8 . . . B 2 -2.183 -15.47 15.231 1 23.22 ? C6 0J8 1401 A 1 HETATM 4 N N1 0J8 . . . B 2 -1.174 -15.247 16.105 1 23.9 ? N1 0J8 1401 A 1 HETATM 5 N N3 0J8 . . . B 2 -0.155 -17.307 15.532 1 19.66 ? N3 0J8 1401 A 1 HETATM 6 C CAP 0J8 . . . B 2 -7.613 -21.132 10.635 1 36.2 ? CAP 0J8 1401 A 1 HETATM 7 C CAN 0J8 . . . B 2 -8.385 -22.302 9.993 1 39.08 ? CAN 0J8 1401 A 1 HETATM 8 N NAW 0J8 . . . B 2 -8.344 -22.271 8.528 1 43.97 ? NAW 0J8 1401 A 1 HETATM 9 C CAO 0J8 . . . B 2 -7.465 -21.299 7.857 1 40.61 ? CAO 0J8 1401 A 1 HETATM 10 C CAQ 0J8 . . . B 2 -6.163 -20.922 8.548 1 34 ? CAQ 0J8 1401 A 1 HETATM 11 C CBG 0J8 . . . B 2 -6.22 -21.008 10.059 1 34.98 ? CBG 0J8 1401 A 1 HETATM 12 N NBI 0J8 . . . B 2 -5.518 -19.836 10.648 1 31.96 ? NBI 0J8 1401 A 1 HETATM 13 C CAM 0J8 . . . B 2 -4.513 -19.902 11.543 1 23.7 ? CAM 0J8 1401 A 1 HETATM 14 N NAT 0J8 . . . B 2 -5.807 -18.503 10.373 1 35.81 ? NAT 0J8 1401 A 1 HETATM 15 C CAJ 0J8 . . . B 2 -4.958 -17.727 11.105 1 29.63 ? CAJ 0J8 1401 A 1 HETATM 16 C CBA 0J8 . . . B 2 -4.134 -18.597 11.829 1 28.8 ? CBA 0J8 1401 A 1 HETATM 17 C CAZ 0J8 . . . B 2 -3.067 -18.213 12.807 1 28.19 ? CAZ 0J8 1401 A 1 HETATM 18 C CAL 0J8 . . . B 2 -3.18 -16.987 13.52 1 19.89 ? CAL 0J8 1401 A 1 HETATM 19 C CAI 0J8 . . . B 2 -2.004 -19.081 13.034 1 24.96 ? CAI 0J8 1401 A 1 HETATM 20 N NAS 0J8 . . . B 2 -1.051 -18.759 13.937 1 23.33 ? NAS 0J8 1401 A 1 HETATM 21 C C2 0J8 . . . B 2 -0.207 -16.166 16.24 1 26.13 ? C2 0J8 1401 A 1 HETATM 22 C CBJ 0J8 . . . B 2 0.913 -15.872 17.233 1 27.45 ? CBJ 0J8 1401 A 1 HETATM 23 F FAD 0J8 . . . B 2 1.607 -16.968 17.501 1 30.86 ? FAD 0J8 1401 A 1 HETATM 24 F FAE 0J8 . . . B 2 1.653 -14.932 16.679 1 27.52 ? FAE 0J8 1401 A 1 HETATM 25 F FAC 0J8 . . . B 2 0.431 -15.434 18.382 1 32.32 ? FAC 0J8 1401 A 1 HETATM 26 N NAX 0J8 . . . B 2 -3.208 -14.453 15.102 1 20.21 ? NAX 0J8 1401 A 1 HETATM 27 C CAR 0J8 . . . B 2 -2.985 -13.176 15.754 1 23.93 ? CAR 0J8 1401 A 1 HETATM 28 C CAY 0J8 . . . B 2 -3.642 -13.329 17.113 1 24.68 ? CAY 0J8 1401 A 1 HETATM 29 C CAK 0J8 . . . B 2 -2.84 -13.422 18.253 1 24.73 ? CAK 0J8 1401 A 1 HETATM 30 C CAG 0J8 . . . B 2 -5.057 -13.44 17.21 1 22.91 ? CAG 0J8 1401 A 1 HETATM 31 C CAF 0J8 . . . B 2 -5.66 -13.615 18.465 1 28.67 ? CAF 0J8 1401 A 1 HETATM 32 C CAH 0J8 . . . B 2 -4.865 -13.703 19.611 1 24.8 ? CAH 0J8 1401 A 1 HETATM 33 C CBB 0J8 . . . B 2 -3.449 -13.606 19.5 1 26.06 ? CBB 0J8 1401 A 1 HETATM 34 N NBH 0J8 . . . B 2 -2.668 -13.702 20.695 1 26.65 ? NBH 0J8 1401 A 1 HETATM 35 O OAB 0J8 . . . B 2 -3.225 -14.278 21.715 1 28.88 ? OAB 0J8 1401 A 1 HETATM 36 O OAA 0J8 . . . B 2 -1.438 -13.226 20.761 1 31.7 ? OAA 0J8 1401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #