data_4GI4 # _model_server_result.job_id rzIs1h6r6U1UHeGHFDnlOQ _model_server_result.datetime_utc '2024-10-18 17:22:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gi4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4GI4 # _exptl.entry_id 4GI4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 453.539 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-amino-4-[2-(benzylamino)ethyl]-2-[(2-phenylethyl)amino]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.05 _cell.angle_gamma 90 _cell.entry_id 4GI4 _cell.length_a 89.85 _cell.length_b 64.728 _cell.length_c 70.65 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GI4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 318 A CYS 318 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc2 A SG CYS 320 A CYS 320 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc3 A SG CYS 323 A CYS 323 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc4 A ND1 HIS 349 A HIS 349 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'C26 H27 N7 O' _chem_comp.formula_weight 453.539 _chem_comp.id 0EX _chem_comp.mon_nstd_flag . _chem_comp.name 6-amino-4-[2-(benzylamino)ethyl]-2-[(2-phenylethyl)amino]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N4 0EX sing 1 n n C14 C13 0EX doub 2 n y C14 C15 0EX sing 3 n y C13 C12 0EX sing 4 n y C15 C10 0EX doub 5 n y N4 C17 0EX sing 6 n n C12 C11 0EX doub 7 n y C10 C11 0EX sing 8 n y C10 C9 0EX sing 9 n n C17 N3 0EX doub 10 n y C17 N1 0EX sing 11 n y N2 C9 0EX sing 12 n n N2 C8 0EX sing 13 n n N3 C16 0EX sing 14 n y N1 C3 0EX sing 15 n y C8 C7 0EX sing 16 n n C16 C3 0EX doub 17 n y C16 C6 0EX sing 18 n y C7 C6 0EX sing 19 n n C3 C2 0EX sing 20 n y C6 C5 0EX doub 21 n y C2 C4 0EX doub 22 n y C5 C4 0EX sing 23 n y C5 N5 0EX sing 24 n n C4 C19 0EX sing 25 n n N5 C18 0EX doub 26 n n C19 O1 0EX doub 27 n n C19 N7 0EX sing 28 n n C18 N7 0EX sing 29 n n C18 N6 0EX sing 30 n n N1 H1 0EX sing 31 n n C2 H2 0EX sing 32 n n C7 H3 0EX sing 33 n n C7 H4 0EX sing 34 n n C8 H5 0EX sing 35 n n C8 H6 0EX sing 36 n n N2 H7 0EX sing 37 n n C9 H9 0EX sing 38 n n C9 H10 0EX sing 39 n n C11 H11 0EX sing 40 n n C12 H12 0EX sing 41 n n C13 H13 0EX sing 42 n n C14 H14 0EX sing 43 n n C15 H15 0EX sing 44 n n N4 H17 0EX sing 45 n n C1 H18 0EX sing 46 n n C1 H19 0EX sing 47 n n N6 H21 0EX sing 48 n n N6 H22 0EX sing 49 n n N7 H23 0EX sing 50 n n C1 C20 0EX sing 51 n n C20 C21 0EX sing 52 n n C21 C22 0EX sing 53 n y C22 C23 0EX doub 54 n y C23 C24 0EX sing 55 n y C24 C25 0EX doub 56 n y C25 C26 0EX sing 57 n y C26 C21 0EX doub 58 n y C20 H8 0EX sing 59 n n C20 H16 0EX sing 60 n n C22 H20 0EX sing 61 n n C23 H24 0EX sing 62 n n C24 H25 0EX sing 63 n n C25 H26 0EX sing 64 n n C26 H27 0EX sing 65 n n # _atom_sites.entry_id 4GI4 _atom_sites.fract_transf_matrix[1][1] 0.01113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00118 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014234 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0EX A 1 501 501 0EX LIG . C 3 ZN A 1 502 601 ZN ZN . D 4 HOH A 1 601 1 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 4 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 6 HOH HOH . D 4 HOH A 7 607 7 HOH HOH . D 4 HOH A 8 608 8 HOH HOH . D 4 HOH A 9 609 9 HOH HOH . D 4 HOH A 10 610 10 HOH HOH . D 4 HOH A 11 611 11 HOH HOH . D 4 HOH A 12 612 12 HOH HOH . D 4 HOH A 13 613 13 HOH HOH . D 4 HOH A 14 614 14 HOH HOH . D 4 HOH A 15 615 15 HOH HOH . D 4 HOH A 16 616 16 HOH HOH . D 4 HOH A 17 617 17 HOH HOH . D 4 HOH A 18 618 18 HOH HOH . D 4 HOH A 19 619 19 HOH HOH . D 4 HOH A 20 620 20 HOH HOH . D 4 HOH A 21 621 21 HOH HOH . D 4 HOH A 22 622 22 HOH HOH . D 4 HOH A 23 623 23 HOH HOH . D 4 HOH A 24 624 24 HOH HOH . D 4 HOH A 25 625 25 HOH HOH . D 4 HOH A 26 626 26 HOH HOH . D 4 HOH A 27 627 27 HOH HOH . D 4 HOH A 28 628 28 HOH HOH . D 4 HOH A 29 629 29 HOH HOH . D 4 HOH A 30 630 30 HOH HOH . D 4 HOH A 31 631 31 HOH HOH . D 4 HOH A 32 632 32 HOH HOH . D 4 HOH A 33 633 33 HOH HOH . D 4 HOH A 34 634 34 HOH HOH . D 4 HOH A 35 635 35 HOH HOH . D 4 HOH A 36 636 36 HOH HOH . D 4 HOH A 37 637 37 HOH HOH . D 4 HOH A 38 638 38 HOH HOH . D 4 HOH A 39 639 39 HOH HOH . D 4 HOH A 40 640 40 HOH HOH . D 4 HOH A 41 641 41 HOH HOH . D 4 HOH A 42 642 42 HOH HOH . D 4 HOH A 43 643 43 HOH HOH . D 4 HOH A 44 644 44 HOH HOH . D 4 HOH A 45 645 45 HOH HOH . D 4 HOH A 46 646 46 HOH HOH . D 4 HOH A 47 647 47 HOH HOH . D 4 HOH A 48 648 48 HOH HOH . D 4 HOH A 49 649 49 HOH HOH . D 4 HOH A 50 650 50 HOH HOH . D 4 HOH A 51 651 51 HOH HOH . D 4 HOH A 52 652 52 HOH HOH . D 4 HOH A 53 653 53 HOH HOH . D 4 HOH A 54 654 54 HOH HOH . D 4 HOH A 55 655 55 HOH HOH . D 4 HOH A 56 656 56 HOH HOH . D 4 HOH A 57 657 57 HOH HOH . D 4 HOH A 58 658 58 HOH HOH . D 4 HOH A 59 659 59 HOH HOH . D 4 HOH A 60 660 60 HOH HOH . D 4 HOH A 61 661 61 HOH HOH . D 4 HOH A 62 662 62 HOH HOH . D 4 HOH A 63 663 63 HOH HOH . D 4 HOH A 64 664 64 HOH HOH . D 4 HOH A 65 665 65 HOH HOH . D 4 HOH A 66 666 66 HOH HOH . D 4 HOH A 67 667 67 HOH HOH . D 4 HOH A 68 668 68 HOH HOH . D 4 HOH A 69 669 69 HOH HOH . D 4 HOH A 70 670 70 HOH HOH . D 4 HOH A 71 671 71 HOH HOH . D 4 HOH A 72 672 72 HOH HOH . D 4 HOH A 73 673 74 HOH HOH . D 4 HOH A 74 674 75 HOH HOH . D 4 HOH A 75 675 76 HOH HOH . D 4 HOH A 76 676 77 HOH HOH . D 4 HOH A 77 677 78 HOH HOH . D 4 HOH A 78 678 79 HOH HOH . D 4 HOH A 79 679 80 HOH HOH . D 4 HOH A 80 680 81 HOH HOH . D 4 HOH A 81 681 82 HOH HOH . D 4 HOH A 82 682 83 HOH HOH . D 4 HOH A 83 683 84 HOH HOH . D 4 HOH A 84 684 85 HOH HOH . D 4 HOH A 85 685 86 HOH HOH . D 4 HOH A 86 686 87 HOH HOH . D 4 HOH A 87 687 88 HOH HOH . D 4 HOH A 88 688 89 HOH HOH . D 4 HOH A 89 689 90 HOH HOH . D 4 HOH A 90 690 91 HOH HOH . D 4 HOH A 91 691 92 HOH HOH . D 4 HOH A 92 692 93 HOH HOH . D 4 HOH A 93 693 94 HOH HOH . D 4 HOH A 94 694 95 HOH HOH . D 4 HOH A 95 695 96 HOH HOH . D 4 HOH A 96 696 97 HOH HOH . D 4 HOH A 97 697 98 HOH HOH . D 4 HOH A 98 698 99 HOH HOH . D 4 HOH A 99 699 100 HOH HOH . D 4 HOH A 100 700 101 HOH HOH . D 4 HOH A 101 701 104 HOH HOH . D 4 HOH A 102 702 105 HOH HOH . D 4 HOH A 103 703 106 HOH HOH . D 4 HOH A 104 704 107 HOH HOH . D 4 HOH A 105 705 108 HOH HOH . D 4 HOH A 106 706 109 HOH HOH . D 4 HOH A 107 707 110 HOH HOH . D 4 HOH A 108 708 111 HOH HOH . D 4 HOH A 109 709 112 HOH HOH . D 4 HOH A 110 710 114 HOH HOH . D 4 HOH A 111 711 115 HOH HOH . D 4 HOH A 112 712 116 HOH HOH . D 4 HOH A 113 713 117 HOH HOH . D 4 HOH A 114 714 118 HOH HOH . D 4 HOH A 115 715 119 HOH HOH . D 4 HOH A 116 716 120 HOH HOH . D 4 HOH A 117 717 121 HOH HOH . D 4 HOH A 118 718 122 HOH HOH . D 4 HOH A 119 719 123 HOH HOH . D 4 HOH A 120 720 124 HOH HOH . D 4 HOH A 121 721 125 HOH HOH . D 4 HOH A 122 722 126 HOH HOH . D 4 HOH A 123 723 127 HOH HOH . D 4 HOH A 124 724 128 HOH HOH . D 4 HOH A 125 725 129 HOH HOH . D 4 HOH A 126 726 130 HOH HOH . D 4 HOH A 127 727 131 HOH HOH . D 4 HOH A 128 728 132 HOH HOH . D 4 HOH A 129 729 134 HOH HOH . D 4 HOH A 130 730 135 HOH HOH . D 4 HOH A 131 731 136 HOH HOH . D 4 HOH A 132 732 137 HOH HOH . D 4 HOH A 133 733 138 HOH HOH . D 4 HOH A 134 734 139 HOH HOH . D 4 HOH A 135 735 140 HOH HOH . D 4 HOH A 136 736 142 HOH HOH . D 4 HOH A 137 737 143 HOH HOH . D 4 HOH A 138 738 144 HOH HOH . D 4 HOH A 139 739 145 HOH HOH . D 4 HOH A 140 740 146 HOH HOH . D 4 HOH A 141 741 147 HOH HOH . D 4 HOH A 142 742 148 HOH HOH . D 4 HOH A 143 743 149 HOH HOH . D 4 HOH A 144 744 150 HOH HOH . D 4 HOH A 145 745 152 HOH HOH . D 4 HOH A 146 746 153 HOH HOH . D 4 HOH A 147 747 154 HOH HOH . D 4 HOH A 148 748 155 HOH HOH . D 4 HOH A 149 749 156 HOH HOH . D 4 HOH A 150 750 157 HOH HOH . D 4 HOH A 151 751 159 HOH HOH . D 4 HOH A 152 752 160 HOH HOH . D 4 HOH A 153 753 161 HOH HOH . D 4 HOH A 154 754 162 HOH HOH . D 4 HOH A 155 755 163 HOH HOH . D 4 HOH A 156 756 164 HOH HOH . D 4 HOH A 157 757 165 HOH HOH . D 4 HOH A 158 758 166 HOH HOH . D 4 HOH A 159 759 167 HOH HOH . D 4 HOH A 160 760 168 HOH HOH . D 4 HOH A 161 761 169 HOH HOH . D 4 HOH A 162 762 170 HOH HOH . D 4 HOH A 163 763 171 HOH HOH . D 4 HOH A 164 764 172 HOH HOH . D 4 HOH A 165 765 173 HOH HOH . D 4 HOH A 166 766 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 0EX . . . B 2 19.182 18.031 18.112 1 10.64 ? N1 0EX 501 A 1 HETATM 2 C C3 0EX . . . B 2 18.349 17.679 19.145 1 9.59 ? C3 0EX 501 A 1 HETATM 3 C C2 0EX . . . B 2 18.591 17.651 20.529 1 5.73 ? C2 0EX 501 A 1 HETATM 4 C C4 0EX . . . B 2 17.533 17.267 21.365 1 8.05 ? C4 0EX 501 A 1 HETATM 5 C C5 0EX . . . B 2 16.251 16.924 20.899 1 12.4 ? C5 0EX 501 A 1 HETATM 6 C C6 0EX . . . B 2 16.026 16.906 19.501 1 11.68 ? C6 0EX 501 A 1 HETATM 7 C C7 0EX . . . B 2 14.725 16.361 18.941 1 7.67 ? C7 0EX 501 A 1 HETATM 8 C C8 0EX . . . B 2 14.926 15.022 18.209 1 13.44 ? C8 0EX 501 A 1 HETATM 9 N N2 0EX . . . B 2 13.957 14.918 17.113 1 16.74 ? N2 0EX 501 A 1 HETATM 10 C C9 0EX . . . B 2 12.583 14.857 17.625 1 24.4 ? C9 0EX 501 A 1 HETATM 11 C C10 0EX . . . B 2 11.656 15.735 16.812 1 24.82 ? C10 0EX 501 A 1 HETATM 12 C C11 0EX . . . B 2 11.407 17.058 17.191 1 21.19 ? C11 0EX 501 A 1 HETATM 13 C C12 0EX . . . B 2 10.588 17.87 16.401 1 29.12 ? C12 0EX 501 A 1 HETATM 14 C C13 0EX . . . B 2 10.018 17.366 15.232 1 30.76 ? C13 0EX 501 A 1 HETATM 15 C C14 0EX . . . B 2 10.244 16.045 14.845 1 28.65 ? C14 0EX 501 A 1 HETATM 16 C C15 0EX . . . B 2 11.078 15.242 15.629 1 31.29 ? C15 0EX 501 A 1 HETATM 17 C C16 0EX . . . B 2 17.129 17.214 18.671 1 10 ? C16 0EX 501 A 1 HETATM 18 N N3 0EX . . . B 2 17.202 17.472 17.315 1 8.48 ? N3 0EX 501 A 1 HETATM 19 C C17 0EX . . . B 2 18.484 17.837 17.01 1 13.81 ? C17 0EX 501 A 1 HETATM 20 N N4 0EX . . . B 2 18.901 18.041 15.75 1 14.73 ? N4 0EX 501 A 1 HETATM 21 C C1 0EX . . . B 2 18.137 17.967 14.529 1 13.13 ? C1 0EX 501 A 1 HETATM 22 N N5 0EX . . . B 2 15.256 16.503 21.802 1 10.31 ? N5 0EX 501 A 1 HETATM 23 C C18 0EX . . . B 2 15.466 16.571 23.075 1 11.94 ? C18 0EX 501 A 1 HETATM 24 N N6 0EX . . . B 2 14.487 16.315 23.976 1 13.22 ? N6 0EX 501 A 1 HETATM 25 N N7 0EX . . . B 2 16.636 17.043 23.592 1 6.26 ? N7 0EX 501 A 1 HETATM 26 C C19 0EX . . . B 2 17.726 17.345 22.82 1 9.89 ? C19 0EX 501 A 1 HETATM 27 O O1 0EX . . . B 2 18.782 17.723 23.308 1 14.87 ? O1 0EX 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #