data_4GJE
#
_model_server_result.job_id            GiVvaauzoxIpwJEvA922xg 
_model_server_result.datetime_utc      '2024-12-26 12:24:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4gje 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":110}' 
#
_entry.id    4GJE 
#
_exptl.entry_id    4GJE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4GJE 
_cell.length_a            49.627 
_cell.length_b            49.627 
_cell.length_c            116.313 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4GJE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 15 A GLU 15 1_555 L CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc2 A OE2 GLU 19 A GLU 19 1_555 L CA CA . A CA 111 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.923 ? 
metalc ? metalc3 A OE2 GLU 19 A GLU 19 1_555 M CA CA . A CA 112 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc4 A OE1 GLU 19 A GLU 19 1_555 M CA CA . A CA 112 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.56 ? 
metalc ? metalc5 A O PHE 27 A PHE 27 1_555 D CD CD . A CD 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc6 A OD1 ASP 33 A ASP 33 1_555 B CD CD . A CD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc7 A OD2 ASP 33 A ASP 33 1_555 B CD CD . A CD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
metalc ? metalc8 A O CYS 35 A CYS 35 1_555 B CD CD . A CD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
metalc ? metalc9 A SG CYS 35 A CYS 35 1_555 B CD CD . A CD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? 
metalc ? metalc10 A OE2 GLU 40 A GLU 40 1_555 D CD CD . A CD 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc11 A OE1 GLU 40 A GLU 40 1_555 D CD CD . A CD 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc12 A OE1 GLN 50 A GLN 50 1_555 F CD CD . A CD 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc13 A OE1 GLU 56 A GLU 56 1_555 E CD CD . A CD 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc14 A OE2 GLU 56 A GLU 56 1_555 E CD CD . A CD 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc15 A OE2 GLU 59 A GLU 59 1_555 H CD CD . A CD 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc16 A OE1 GLU 59 A GLU 59 1_555 H CD CD . A CD 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? 
metalc ? metalc17 A OD2 ASP 65 A ASP 65 1_555 C CD CD . A CD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc18 A OE2 GLU 66 A GLU 66 1_555 G CD CD . A CD 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc19 A O THR 71 A THR 71 1_555 C CD CD . A CD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc20 A OD2 ASP 73 A ASP 73 1_555 G CD CD . A CD 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? 
metalc ? metalc21 A OD1 ASP 73 A ASP 73 1_555 G CD CD . A CD 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? 
metalc ? metalc22 A OD2 ASP 75 A ASP 75 1_555 G CD CD . A CD 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc23 A OD1 ASP 75 A ASP 75 1_555 G CD CD . A CD 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? 
metalc ? metalc24 A OE1 GLU 76 A GLU 76 1_555 C CD CD . A CD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc25 A OE2 GLU 76 A GLU 76 1_555 C CD CD . A CD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc26 A SG CYS 84 A CYS 84 1_555 E CD CD . A CD 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc27 A O CYS 84 A CYS 84 1_555 F CD CD . A CD 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc28 A SG CYS 84 A CYS 84 1_555 F CD CD . A CD 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
metalc ? metalc29 A OD2 ASP 87 A ASP 87 1_555 E CD CD . A CD 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc30 A OD1 ASP 87 A ASP 87 1_555 F CD CD . A CD 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc31 B CD CD . A CD 101 1_555 J OXT ACT . A ACT 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc32 B CD CD . A CD 101 1_555 N O HOH . A HOH 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc33 C CD CD . A CD 102 1_555 N O HOH . A HOH 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? 
metalc ? metalc34 C CD CD . A CD 102 1_555 N O HOH . A HOH 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? 
metalc ? metalc35 D CD CD . A CD 103 1_555 N O HOH . A HOH 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc36 D CD CD . A CD 103 1_555 N O HOH . A HOH 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc37 H CD CD . A CD 107 1_555 N O HOH . A HOH 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc38 H CD CD . A CD 107 1_555 N O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? 
metalc ? metalc39 H CD CD . A CD 107 1_555 N O HOH . A HOH 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
metalc ? metalc40 M CA CA . A CA 112 1_555 N O HOH . A HOH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     4GJE 
_atom_sites.fract_transf_matrix[1][1]    0.02015 
_atom_sites.fract_transf_matrix[1][2]    0.011634 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008597 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CD A 1 101 1 CD CD . 
C 2 CD A 1 102 2 CD CD . 
D 2 CD A 1 103 3 CD CD . 
E 2 CD A 1 104 4 CD CD . 
F 2 CD A 1 105 5 CD CD . 
G 2 CD A 1 106 6 CD CD . 
H 2 CD A 1 107 7 CD CD . 
I 3 ACT A 1 108 1 ACT ACT . 
J 3 ACT A 1 109 2 ACT ACT . 
K 3 ACT A 1 110 3 ACT ACT . 
L 4 CA A 1 111 1 CA CA . 
M 4 CA A 1 112 2 CA CA . 
N 5 HOH A 1 201 1 HOH HOH . 
N 5 HOH A 2 202 2 HOH HOH . 
N 5 HOH A 3 203 3 HOH HOH . 
N 5 HOH A 4 204 4 HOH HOH . 
N 5 HOH A 5 205 5 HOH HOH . 
N 5 HOH A 6 206 6 HOH HOH . 
N 5 HOH A 7 207 7 HOH HOH . 
N 5 HOH A 8 208 8 HOH HOH . 
N 5 HOH A 9 209 9 HOH HOH . 
N 5 HOH A 10 210 10 HOH HOH . 
N 5 HOH A 11 211 11 HOH HOH . 
N 5 HOH A 12 212 12 HOH HOH . 
N 5 HOH A 13 213 13 HOH HOH . 
N 5 HOH A 14 214 14 HOH HOH . 
N 5 HOH A 15 215 15 HOH HOH . 
N 5 HOH A 16 216 16 HOH HOH . 
N 5 HOH A 17 217 17 HOH HOH . 
N 5 HOH A 18 218 18 HOH HOH . 
N 5 HOH A 19 219 19 HOH HOH . 
N 5 HOH A 20 220 20 HOH HOH . 
N 5 HOH A 21 221 21 HOH HOH . 
N 5 HOH A 22 222 22 HOH HOH . 
N 5 HOH A 23 223 23 HOH HOH . 
N 5 HOH A 24 224 24 HOH HOH . 
N 5 HOH A 25 225 25 HOH HOH . 
N 5 HOH A 26 226 26 HOH HOH . 
N 5 HOH A 27 227 27 HOH HOH . 
N 5 HOH A 28 228 28 HOH HOH . 
N 5 HOH A 29 229 29 HOH HOH . 
N 5 HOH A 30 230 30 HOH HOH . 
N 5 HOH A 31 231 31 HOH HOH . 
N 5 HOH A 32 232 32 HOH HOH . 
N 5 HOH A 33 233 33 HOH HOH . 
N 5 HOH A 34 234 34 HOH HOH . 
N 5 HOH A 35 235 35 HOH HOH . 
N 5 HOH A 36 236 36 HOH HOH . 
N 5 HOH A 37 237 37 HOH HOH . 
N 5 HOH A 38 238 38 HOH HOH . 
N 5 HOH A 39 239 39 HOH HOH . 
N 5 HOH A 40 240 40 HOH HOH . 
N 5 HOH A 41 241 41 HOH HOH . 
N 5 HOH A 42 242 42 HOH HOH . 
N 5 HOH A 43 243 43 HOH HOH . 
N 5 HOH A 44 244 44 HOH HOH . 
N 5 HOH A 45 245 45 HOH HOH . 
N 5 HOH A 46 246 46 HOH HOH . 
N 5 HOH A 47 247 47 HOH HOH . 
N 5 HOH A 48 248 48 HOH HOH . 
N 5 HOH A 49 249 49 HOH HOH . 
N 5 HOH A 50 250 50 HOH HOH . 
N 5 HOH A 51 251 51 HOH HOH . 
N 5 HOH A 52 252 52 HOH HOH . 
N 5 HOH A 53 253 53 HOH HOH . 
N 5 HOH A 54 254 54 HOH HOH . 
N 5 HOH A 55 255 55 HOH HOH . 
N 5 HOH A 56 256 56 HOH HOH . 
N 5 HOH A 57 257 57 HOH HOH . 
N 5 HOH A 58 258 58 HOH HOH . 
N 5 HOH A 59 259 59 HOH HOH . 
N 5 HOH A 60 260 60 HOH HOH . 
N 5 HOH A 61 261 61 HOH HOH . 
N 5 HOH A 62 262 62 HOH HOH . 
N 5 HOH A 63 263 63 HOH HOH . 
N 5 HOH A 64 264 64 HOH HOH . 
N 5 HOH A 65 265 65 HOH HOH . 
N 5 HOH A 66 266 66 HOH HOH . 
N 5 HOH A 67 267 67 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . K 3 -14.948 -8.275 9.4 0.5 45.7 ? C ACT 110 A 1 
HETATM 2 O O ACT . . . K 3 -15.911 -7.878 8.701 0.5 45.75 ? O ACT 110 A 1 
HETATM 3 O OXT ACT . . . K 3 -15.192 -9.305 10.084 0.5 46.64 ? OXT ACT 110 A 1 
HETATM 4 C CH3 ACT . . . K 3 -13.618 -7.554 9.404 0.5 45.29 ? CH3 ACT 110 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#