data_4GKZ
#
_model_server_result.job_id            QQ-VB73Ho1vwJgevmJhH6Q 
_model_server_result.datetime_utc      '2025-07-19 11:33:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4gkz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":307}' 
#
_entry.id    4GKZ 
#
_exptl.entry_id    4GKZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              163.215 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TRIS(HYDROXYETHYL)AMINOMETHANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.33 
_cell.angle_gamma         90 
_cell.entry_id            4GKZ 
_cell.length_a            69.24 
_cell.length_b            49.66 
_cell.length_c            72.61 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4GKZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 22 1_555 A SG CYS 91 A CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf2 A SG CYS 138 A CYS 137 1_555 A SG CYS 188 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf3 A SG CYS 163 A CYS 162 1_555 B SG CYS 169 B CYS 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf4 B SG CYS 22 B CYS 23 1_555 B SG CYS 90 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf5 B SG CYS 143 B CYS 144 1_555 B SG CYS 208 B CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C7 H17 N O3' 
_chem_comp.formula_weight    163.215 
_chem_comp.id                TAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              TRIS(HYDROXYETHYL)AMINOMETHANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TAM sing 303 n n 
C C2 TAM sing 304 n n 
C C3 TAM sing 305 n n 
C N TAM sing 306 n n 
C1 C4 TAM sing 307 n n 
C1 H11 TAM sing 308 n n 
C1 H12 TAM sing 309 n n 
C2 C5 TAM sing 310 n n 
C2 H21 TAM sing 311 n n 
C2 H22 TAM sing 312 n n 
C3 C6 TAM sing 313 n n 
C3 H31 TAM sing 314 n n 
C3 H32 TAM sing 315 n n 
C4 O4 TAM sing 316 n n 
C4 H41 TAM sing 317 n n 
C4 H42 TAM sing 318 n n 
C5 O5 TAM sing 319 n n 
C5 H51 TAM sing 320 n n 
C5 H52 TAM sing 321 n n 
C6 O6 TAM sing 322 n n 
C6 H61 TAM sing 323 n n 
C6 H62 TAM sing 324 n n 
N HN1 TAM sing 325 n n 
N HN2 TAM sing 326 n n 
O4 HO4 TAM sing 327 n n 
O5 HO5 TAM sing 328 n n 
O6 HO6 TAM sing 329 n n 
#
_atom_sites.entry_id                     4GKZ 
_atom_sites.fract_transf_matrix[1][1]    0.014443 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001094 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020137 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013812 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 301 301 EDO EDO . 
D 3 EDO A 1 302 302 EDO EDO . 
E 3 EDO A 1 303 303 EDO EDO . 
F 3 EDO A 1 304 306 EDO EDO . 
G 4 SO4 A 1 305 401 SO4 SO4 . 
H 4 SO4 A 1 306 402 SO4 SO4 . 
I 5 TAM A 1 307 501 TAM TAM . 
J 3 EDO B 1 301 304 EDO EDO . 
K 3 EDO B 1 302 305 EDO EDO . 
L 6 HOH A 1 601 601 HOH HOH . 
L 6 HOH A 2 602 602 HOH HOH . 
L 6 HOH A 3 603 603 HOH HOH . 
L 6 HOH A 4 604 604 HOH HOH . 
L 6 HOH A 5 605 605 HOH HOH . 
L 6 HOH A 6 606 606 HOH HOH . 
L 6 HOH A 7 607 608 HOH HOH . 
L 6 HOH A 8 608 611 HOH HOH . 
L 6 HOH A 9 609 612 HOH HOH . 
L 6 HOH A 10 610 613 HOH HOH . 
L 6 HOH A 11 611 616 HOH HOH . 
L 6 HOH A 12 612 618 HOH HOH . 
L 6 HOH A 13 613 619 HOH HOH . 
L 6 HOH A 14 614 622 HOH HOH . 
L 6 HOH A 15 615 625 HOH HOH . 
L 6 HOH A 16 616 626 HOH HOH . 
L 6 HOH A 17 617 627 HOH HOH . 
L 6 HOH A 18 618 628 HOH HOH . 
L 6 HOH A 19 619 632 HOH HOH . 
L 6 HOH A 20 620 634 HOH HOH . 
L 6 HOH A 21 621 638 HOH HOH . 
L 6 HOH A 22 622 639 HOH HOH . 
L 6 HOH A 23 623 640 HOH HOH . 
L 6 HOH A 24 624 641 HOH HOH . 
L 6 HOH A 25 625 642 HOH HOH . 
L 6 HOH A 26 626 643 HOH HOH . 
L 6 HOH A 27 627 644 HOH HOH . 
L 6 HOH A 28 628 645 HOH HOH . 
L 6 HOH A 29 629 646 HOH HOH . 
L 6 HOH A 30 630 647 HOH HOH . 
L 6 HOH A 31 631 648 HOH HOH . 
L 6 HOH A 32 632 649 HOH HOH . 
M 6 HOH B 1 401 607 HOH HOH . 
M 6 HOH B 2 402 609 HOH HOH . 
M 6 HOH B 3 403 610 HOH HOH . 
M 6 HOH B 4 404 614 HOH HOH . 
M 6 HOH B 5 405 615 HOH HOH . 
M 6 HOH B 6 406 617 HOH HOH . 
M 6 HOH B 7 407 620 HOH HOH . 
M 6 HOH B 8 408 621 HOH HOH . 
M 6 HOH B 9 409 623 HOH HOH . 
M 6 HOH B 10 410 624 HOH HOH . 
M 6 HOH B 11 411 629 HOH HOH . 
M 6 HOH B 12 412 630 HOH HOH . 
M 6 HOH B 13 413 631 HOH HOH . 
M 6 HOH B 14 414 633 HOH HOH . 
M 6 HOH B 15 415 635 HOH HOH . 
M 6 HOH B 16 416 636 HOH HOH . 
M 6 HOH B 17 417 637 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TAM . . . I 5 5.13 -8.914 23.368 1 72.25 ? C TAM 307 A 1 
HETATM 2 C C1 TAM . . . I 5 4.792 -7.762 22.394 1 71.58 ? C1 TAM 307 A 1 
HETATM 3 C C2 TAM . . . I 5 6.581 -8.801 23.91 1 72.38 ? C2 TAM 307 A 1 
HETATM 4 C C3 TAM . . . I 5 4.948 -10.252 22.63 1 72.33 ? C3 TAM 307 A 1 
HETATM 5 C C4 TAM . . . I 5 4.281 -6.435 22.987 1 71.51 ? C4 TAM 307 A 1 
HETATM 6 C C5 TAM . . . I 5 6.971 -7.384 24.382 1 72.68 ? C5 TAM 307 A 1 
HETATM 7 C C6 TAM . . . I 5 5.294 -11.507 23.445 1 72.93 ? C6 TAM 307 A 1 
HETATM 8 N N TAM . . . I 5 4.147 -8.944 24.475 1 72.03 ? N TAM 307 A 1 
HETATM 9 O O4 TAM . . . I 5 5.025 -5.302 22.48 1 69.4 ? O4 TAM 307 A 1 
HETATM 10 O O5 TAM . . . I 5 8.188 -7.376 25.14 1 72.09 ? O5 TAM 307 A 1 
HETATM 11 O O6 TAM . . . I 5 6.347 -12.257 22.82 1 74.19 ? O6 TAM 307 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#