data_4GL9 # _model_server_result.job_id czGfM3K23TZn8dPeeBXhbA _model_server_result.datetime_utc '2024-11-24 22:38:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gl9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1202}' # _entry.id 4GL9 # _exptl.entry_id 4GL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4GL9 _cell.length_a 139.262 _cell.length_b 139.262 _cell.length_c 316.742 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,G,M 1 1 B,H,L,N,O 2 1 C,D,K,P 3 1 F,I,J,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 171 A GLU 1006 1_555 A N PTR 172 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C PTR 172 A PTR 1007 1_555 A N PTR 173 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C PTR 173 A PTR 1008 1_555 A N LYS 174 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C GLU 171 B GLU 1006 1_555 B N PTR 172 B PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C PTR 172 B PTR 1007 1_555 B N PTR 173 B PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C PTR 173 B PTR 1008 1_555 B N LYS 174 B LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 C C GLU 7 I GLU 756 1_555 C N PTR 8 I PTR 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 C C PTR 8 I PTR 757 1_555 C N SER 9 I SER 758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 D C GLU 171 C GLU 1006 1_555 D N PTR 172 C PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 D C PTR 172 C PTR 1007 1_555 D N PTR 173 C PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 D C PTR 173 C PTR 1008 1_555 D N LYS 174 C LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 E C GLU 7 K GLU 756 1_555 E N PTR 8 K PTR 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 E C PTR 8 K PTR 757 1_555 E N SER 9 K SER 758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 F C GLU 7 J GLU 756 1_555 F N PTR 8 J PTR 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 F C PTR 8 J PTR 757 1_555 F N SER 9 J SER 758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 H C GLU 7 L GLU 756 1_555 H N PTR 8 L PTR 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale17 H C PTR 8 L PTR 757 1_555 H N SER 9 L SER 758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale18 I C GLU 171 D GLU 1006 1_555 I N PTR 172 D PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 I C PTR 172 D PTR 1007 1_555 I N PTR 173 D PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 I C PTR 173 D PTR 1008 1_555 I N LYS 174 D LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 300 n n P O2 PO4 sing 301 n n P O3 PO4 sing 302 n n P O4 PO4 sing 303 n n # _atom_sites.entry_id 4GL9 _atom_sites.fract_transf_matrix[1][1] 0.007181 _atom_sites.fract_transf_matrix[1][2] 0.004146 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003157 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 IZA A 1 2001 2001 IZA IZA . N 4 IZA B 1 1201 2003 IZA IZA . O 5 PO4 B 1 1202 1 PO4 PO4 . P 4 IZA C 1 1201 2002 IZA IZA . Q 4 IZA D 1 1201 2004 IZA IZA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . O 5 -55.892 50.882 23.701 1 209.62 ? P PO4 1202 B 1 HETATM 2 O O1 PO4 . . . O 5 -55.528 49.499 24.187 1 203.96 ? O1 PO4 1202 B 1 HETATM 3 O O2 PO4 . . . O 5 -56.962 51.465 24.595 1 214.35 ? O2 PO4 1202 B 1 HETATM 4 O O3 PO4 . . . O 5 -54.671 51.769 23.737 1 197.46 ? O3 PO4 1202 B 1 HETATM 5 O O4 PO4 . . . O 5 -56.412 50.797 22.286 1 216.89 ? O4 PO4 1202 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #