data_4GMY # _model_server_result.job_id 08h0aVjDr70Zc42nwGq0iw _model_server_result.datetime_utc '2024-10-11 00:30:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gmy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 4GMY # _exptl.entry_id 4GMY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 350.199 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,6-dichloro-N-{2-[(cyclopropylcarbonyl)amino]pyridin-4-yl}benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.96 _cell.angle_gamma 90 _cell.entry_id 4GMY _cell.length_a 107.532 _cell.length_b 69.361 _cell.length_c 50.468 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GMY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 176 A GLU 1006 1_555 A N PTR 177 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C PTR 177 A PTR 1007 1_555 A N PTR 178 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale3 A C PTR 178 A PTR 1008 1_555 A N LYS 179 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C16 H13 Cl2 N3 O2' _chem_comp.formula_weight 350.199 _chem_comp.id 0X5 _chem_comp.mon_nstd_flag . _chem_comp.name 2,6-dichloro-N-{2-[(cyclopropylcarbonyl)amino]pyridin-4-yl}benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4GMY _atom_sites.fract_transf_matrix[1][1] 0.0093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001467 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014417 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020059 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0X5 A 1 1201 1 0X5 0X5 . C 3 HOH A 1 1301 0 HOH HOH . C 3 HOH A 2 1302 1 HOH HOH . C 3 HOH A 3 1303 2 HOH HOH . C 3 HOH A 4 1304 3 HOH HOH . C 3 HOH A 5 1305 4 HOH HOH . C 3 HOH A 6 1306 5 HOH HOH . C 3 HOH A 7 1307 6 HOH HOH . C 3 HOH A 8 1308 7 HOH HOH . C 3 HOH A 9 1309 8 HOH HOH . C 3 HOH A 10 1310 9 HOH HOH . C 3 HOH A 11 1311 10 HOH HOH . C 3 HOH A 12 1312 11 HOH HOH . C 3 HOH A 13 1313 12 HOH HOH . C 3 HOH A 14 1314 13 HOH HOH . C 3 HOH A 15 1315 14 HOH HOH . C 3 HOH A 16 1316 15 HOH HOH . C 3 HOH A 17 1317 16 HOH HOH . C 3 HOH A 18 1318 18 HOH HOH . C 3 HOH A 19 1319 19 HOH HOH . C 3 HOH A 20 1320 20 HOH HOH . C 3 HOH A 21 1321 21 HOH HOH . C 3 HOH A 22 1322 22 HOH HOH . C 3 HOH A 23 1323 23 HOH HOH . C 3 HOH A 24 1324 25 HOH HOH . C 3 HOH A 25 1325 26 HOH HOH . C 3 HOH A 26 1326 27 HOH HOH . C 3 HOH A 27 1327 28 HOH HOH . C 3 HOH A 28 1328 29 HOH HOH . C 3 HOH A 29 1329 31 HOH HOH . C 3 HOH A 30 1330 32 HOH HOH . C 3 HOH A 31 1331 34 HOH HOH . C 3 HOH A 32 1332 35 HOH HOH . C 3 HOH A 33 1333 36 HOH HOH . C 3 HOH A 34 1334 37 HOH HOH . C 3 HOH A 35 1335 38 HOH HOH . C 3 HOH A 36 1336 39 HOH HOH . C 3 HOH A 37 1337 40 HOH HOH . C 3 HOH A 38 1338 41 HOH HOH . C 3 HOH A 39 1339 42 HOH HOH . C 3 HOH A 40 1340 43 HOH HOH . C 3 HOH A 41 1341 44 HOH HOH . C 3 HOH A 42 1342 45 HOH HOH . C 3 HOH A 43 1343 47 HOH HOH . C 3 HOH A 44 1344 49 HOH HOH . C 3 HOH A 45 1345 51 HOH HOH . C 3 HOH A 46 1346 52 HOH HOH . C 3 HOH A 47 1347 55 HOH HOH . C 3 HOH A 48 1348 56 HOH HOH . C 3 HOH A 49 1349 57 HOH HOH . C 3 HOH A 50 1350 58 HOH HOH . C 3 HOH A 51 1351 59 HOH HOH . C 3 HOH A 52 1352 60 HOH HOH . C 3 HOH A 53 1353 61 HOH HOH . C 3 HOH A 54 1354 62 HOH HOH . C 3 HOH A 55 1355 63 HOH HOH . C 3 HOH A 56 1356 64 HOH HOH . C 3 HOH A 57 1357 65 HOH HOH . C 3 HOH A 58 1358 68 HOH HOH . C 3 HOH A 59 1359 69 HOH HOH . C 3 HOH A 60 1360 70 HOH HOH . C 3 HOH A 61 1361 71 HOH HOH . C 3 HOH A 62 1362 73 HOH HOH . C 3 HOH A 63 1363 74 HOH HOH . C 3 HOH A 64 1364 75 HOH HOH . C 3 HOH A 65 1365 76 HOH HOH . C 3 HOH A 66 1366 77 HOH HOH . C 3 HOH A 67 1367 78 HOH HOH . C 3 HOH A 68 1368 79 HOH HOH . C 3 HOH A 69 1369 80 HOH HOH . C 3 HOH A 70 1370 82 HOH HOH . C 3 HOH A 71 1371 83 HOH HOH . C 3 HOH A 72 1372 84 HOH HOH . C 3 HOH A 73 1373 85 HOH HOH . C 3 HOH A 74 1374 86 HOH HOH . C 3 HOH A 75 1375 87 HOH HOH . C 3 HOH A 76 1376 88 HOH HOH . C 3 HOH A 77 1377 89 HOH HOH . C 3 HOH A 78 1378 90 HOH HOH . C 3 HOH A 79 1379 91 HOH HOH . C 3 HOH A 80 1380 92 HOH HOH . C 3 HOH A 81 1381 93 HOH HOH . C 3 HOH A 82 1382 94 HOH HOH . C 3 HOH A 83 1383 95 HOH HOH . C 3 HOH A 84 1384 96 HOH HOH . C 3 HOH A 85 1385 97 HOH HOH . C 3 HOH A 86 1386 98 HOH HOH . C 3 HOH A 87 1387 99 HOH HOH . C 3 HOH A 88 1388 100 HOH HOH . C 3 HOH A 89 1389 101 HOH HOH . C 3 HOH A 90 1390 102 HOH HOH . C 3 HOH A 91 1391 103 HOH HOH . C 3 HOH A 92 1392 104 HOH HOH . C 3 HOH A 93 1393 105 HOH HOH . C 3 HOH A 94 1394 106 HOH HOH . C 3 HOH A 95 1395 107 HOH HOH . C 3 HOH A 96 1396 108 HOH HOH . C 3 HOH A 97 1397 109 HOH HOH . C 3 HOH A 98 1398 110 HOH HOH . C 3 HOH A 99 1399 111 HOH HOH . C 3 HOH A 100 1400 112 HOH HOH . C 3 HOH A 101 1401 113 HOH HOH . C 3 HOH A 102 1402 114 HOH HOH . C 3 HOH A 103 1403 115 HOH HOH . C 3 HOH A 104 1404 116 HOH HOH . C 3 HOH A 105 1405 117 HOH HOH . C 3 HOH A 106 1406 118 HOH HOH . C 3 HOH A 107 1407 119 HOH HOH . C 3 HOH A 108 1408 121 HOH HOH . C 3 HOH A 109 1409 122 HOH HOH . C 3 HOH A 110 1410 124 HOH HOH . C 3 HOH A 111 1411 125 HOH HOH . C 3 HOH A 112 1412 126 HOH HOH . C 3 HOH A 113 1413 128 HOH HOH . C 3 HOH A 114 1414 129 HOH HOH . C 3 HOH A 115 1415 130 HOH HOH . C 3 HOH A 116 1416 131 HOH HOH . C 3 HOH A 117 1417 132 HOH HOH . C 3 HOH A 118 1418 133 HOH HOH . C 3 HOH A 119 1419 134 HOH HOH . C 3 HOH A 120 1420 135 HOH HOH . C 3 HOH A 121 1421 136 HOH HOH . C 3 HOH A 122 1422 137 HOH HOH . C 3 HOH A 123 1423 138 HOH HOH . C 3 HOH A 124 1424 139 HOH HOH . C 3 HOH A 125 1425 140 HOH HOH . C 3 HOH A 126 1426 141 HOH HOH . C 3 HOH A 127 1427 142 HOH HOH . C 3 HOH A 128 1428 143 HOH HOH . C 3 HOH A 129 1429 145 HOH HOH . C 3 HOH A 130 1430 146 HOH HOH . C 3 HOH A 131 1431 147 HOH HOH . C 3 HOH A 132 1432 148 HOH HOH . C 3 HOH A 133 1433 149 HOH HOH . C 3 HOH A 134 1434 150 HOH HOH . C 3 HOH A 135 1435 151 HOH HOH . C 3 HOH A 136 1436 152 HOH HOH . C 3 HOH A 137 1437 154 HOH HOH . C 3 HOH A 138 1438 155 HOH HOH . C 3 HOH A 139 1439 156 HOH HOH . C 3 HOH A 140 1440 157 HOH HOH . C 3 HOH A 141 1441 158 HOH HOH . C 3 HOH A 142 1442 159 HOH HOH . C 3 HOH A 143 1443 160 HOH HOH . C 3 HOH A 144 1444 161 HOH HOH . C 3 HOH A 145 1445 165 HOH HOH . C 3 HOH A 146 1446 166 HOH HOH . C 3 HOH A 147 1447 167 HOH HOH . C 3 HOH A 148 1448 168 HOH HOH . C 3 HOH A 149 1449 169 HOH HOH . C 3 HOH A 150 1450 170 HOH HOH . C 3 HOH A 151 1451 171 HOH HOH . C 3 HOH A 152 1452 172 HOH HOH . C 3 HOH A 153 1453 173 HOH HOH . C 3 HOH A 154 1454 176 HOH HOH . C 3 HOH A 155 1455 178 HOH HOH . C 3 HOH A 156 1456 179 HOH HOH . C 3 HOH A 157 1457 181 HOH HOH . C 3 HOH A 158 1458 182 HOH HOH . C 3 HOH A 159 1459 183 HOH HOH . C 3 HOH A 160 1460 184 HOH HOH . C 3 HOH A 161 1461 185 HOH HOH . C 3 HOH A 162 1462 187 HOH HOH . C 3 HOH A 163 1463 188 HOH HOH . C 3 HOH A 164 1464 189 HOH HOH . C 3 HOH A 165 1465 190 HOH HOH . C 3 HOH A 166 1466 191 HOH HOH . C 3 HOH A 167 1467 192 HOH HOH . C 3 HOH A 168 1468 193 HOH HOH . C 3 HOH A 169 1469 194 HOH HOH . C 3 HOH A 170 1470 197 HOH HOH . C 3 HOH A 171 1471 198 HOH HOH . C 3 HOH A 172 1472 199 HOH HOH . C 3 HOH A 173 1473 200 HOH HOH . C 3 HOH A 174 1474 203 HOH HOH . C 3 HOH A 175 1475 205 HOH HOH . C 3 HOH A 176 1476 206 HOH HOH . C 3 HOH A 177 1477 207 HOH HOH . C 3 HOH A 178 1478 209 HOH HOH . C 3 HOH A 179 1479 210 HOH HOH . C 3 HOH A 180 1480 212 HOH HOH . C 3 HOH A 181 1481 213 HOH HOH . C 3 HOH A 182 1482 215 HOH HOH . C 3 HOH A 183 1483 218 HOH HOH . C 3 HOH A 184 1484 219 HOH HOH . C 3 HOH A 185 1485 220 HOH HOH . C 3 HOH A 186 1486 222 HOH HOH . C 3 HOH A 187 1487 223 HOH HOH . C 3 HOH A 188 1488 227 HOH HOH . C 3 HOH A 189 1489 231 HOH HOH . C 3 HOH A 190 1490 232 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 0X5 . . . B 2 11.925 -22.763 4.88 1 52.43 ? C4 0X5 1201 A 1 HETATM 2 C C5 0X5 . . . B 2 11.707 -21.9 3.793 1 54.44 ? C5 0X5 1201 A 1 HETATM 3 C C6 0X5 . . . B 2 12.237 -20.626 3.814 1 52.21 ? C6 0X5 1201 A 1 HETATM 4 C C11 0X5 . . . B 2 9.348 -25.515 5.104 1 23.21 ? C11 0X5 1201 A 1 HETATM 5 C C8 0X5 . . . B 2 11.378 -24.144 4.918 1 35.64 ? C8 0X5 1201 A 1 HETATM 6 C C12 0X5 . . . B 2 9.914 -26.79 5.158 1 13.43 ? C12 0X5 1201 A 1 HETATM 7 C C13 0X5 . . . B 2 9.112 -27.907 5.274 1 5.39 ? C13 0X5 1201 A 1 HETATM 8 C C3 0X5 . . . B 2 12.67 -22.289 5.971 1 46.4 ? C3 0X5 1201 A 1 HETATM 9 C C1 0X5 . . . B 2 12.974 -20.18 4.891 1 48.84 ? C1 0X5 1201 A 1 HETATM 10 C C2 0X5 . . . B 2 13.191 -21.012 5.969 1 43.42 ? C2 0X5 1201 A 1 HETATM 11 CL CL1 0X5 . . . B 2 10.784 -22.371 2.403 1 92.31 ? CL1 0X5 1201 A 1 HETATM 12 O O9 0X5 . . . B 2 12.139 -25.094 4.857 1 28.73 ? O9 0X5 1201 A 1 HETATM 13 N N10 0X5 . . . B 2 10.046 -24.304 5.025 1 29.54 ? N10 0X5 1201 A 1 HETATM 14 N N14 0X5 . . . B 2 7.796 -27.779 5.327 1 10.94 ? N14 0X5 1201 A 1 HETATM 15 C C15 0X5 . . . B 2 7.209 -26.589 5.276 1 9.89 ? C15 0X5 1201 A 1 HETATM 16 C C16 0X5 . . . B 2 7.972 -25.442 5.187 1 14.79 ? C16 0X5 1201 A 1 HETATM 17 N N17 0X5 . . . B 2 5.817 -26.489 5.346 1 14.23 ? N17 0X5 1201 A 1 HETATM 18 C C18 0X5 . . . B 2 5.106 -25.42 4.897 1 11.44 ? C18 0X5 1201 A 1 HETATM 19 O O19 0X5 . . . B 2 5.592 -24.43 4.379 1 17.25 ? O19 0X5 1201 A 1 HETATM 20 C C20 0X5 . . . B 2 3.615 -25.425 5.016 1 5.74 ? C20 0X5 1201 A 1 HETATM 21 C C21 0X5 . . . B 2 2.959 -24.066 5.262 1 5.77 ? C21 0X5 1201 A 1 HETATM 22 C C22 0X5 . . . B 2 2.897 -24.711 3.88 1 5.89 ? C22 0X5 1201 A 1 HETATM 23 CL CL2 0X5 . . . B 2 12.957 -23.298 7.352 1 24.73 ? CL2 0X5 1201 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 23 #