data_4GNC # _model_server_result.job_id IA6xQ9suSutUJ6GTGBSr7Q _model_server_result.datetime_utc '2024-11-14 09:25:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gnc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 4GNC # _exptl.entry_id 4GNC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.65 _cell.angle_gamma 90 _cell.entry_id 4GNC _cell.length_a 64.407 _cell.length_b 50.202 _cell.length_c 86.569 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GNC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 18 A GLU 18 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A OD1 ASP 104 A ASP 104 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc3 A OD2 ASP 104 A ASP 104 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc4 A OD1 ASN 154 A ASN 154 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc5 A OD1 ASP 204 A ASP 204 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc6 C CA CA . A CA 301 1_555 E O2 ASO . A ASO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc7 C CA CA . A CA 301 1_555 E O3 ASO . A ASO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc8 C CA CA . A CA 301 1_555 J O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc9 B OE2 GLU 18 B GLU 18 1_555 F CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc10 B OD1 ASP 104 B ASP 104 1_555 F CA CA . B CA 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc11 B OD2 ASP 104 B ASP 104 1_555 F CA CA . B CA 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc12 B OD1 ASN 154 B ASN 154 1_555 F CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc13 B OD1 ASP 204 B ASP 204 1_555 F CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc14 F CA CA . B CA 301 1_555 G O3 ASO . B ASO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc15 F CA CA . B CA 301 1_555 G O2 ASO . B ASO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc16 F CA CA . B CA 301 1_555 K O HOH . B HOH 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4GNC _atom_sites.fract_transf_matrix[1][1] 0.015526 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002641 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011717 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 301 1 CA CA . D 3 ASO A 1 302 3 ASO DRG . E 3 ASO A 1 303 4 ASO DRG . F 2 CA B 1 301 2 CA CA . G 3 ASO B 1 302 1 ASO DRG . H 3 ASO B 1 303 2 ASO DRG . I 3 ASO B 1 304 5 ASO DRG . J 4 HOH A 1 401 2 HOH HOH . J 4 HOH A 2 402 4 HOH HOH . J 4 HOH A 3 403 6 HOH HOH . J 4 HOH A 4 404 9 HOH HOH . J 4 HOH A 5 405 14 HOH HOH . J 4 HOH A 6 406 15 HOH HOH . J 4 HOH A 7 407 16 HOH HOH . J 4 HOH A 8 408 18 HOH HOH . J 4 HOH A 9 409 23 HOH HOH . J 4 HOH A 10 410 24 HOH HOH . J 4 HOH A 11 411 26 HOH HOH . J 4 HOH A 12 412 27 HOH HOH . J 4 HOH A 13 413 28 HOH HOH . J 4 HOH A 14 414 30 HOH HOH . J 4 HOH A 15 415 33 HOH HOH . J 4 HOH A 16 416 34 HOH HOH . J 4 HOH A 17 417 36 HOH HOH . J 4 HOH A 18 418 38 HOH HOH . J 4 HOH A 19 419 43 HOH HOH . J 4 HOH A 20 420 44 HOH HOH . J 4 HOH A 21 421 45 HOH HOH . J 4 HOH A 22 422 46 HOH HOH . J 4 HOH A 23 423 50 HOH HOH . J 4 HOH A 24 424 51 HOH HOH . J 4 HOH A 25 425 53 HOH HOH . J 4 HOH A 26 426 54 HOH HOH . J 4 HOH A 27 427 56 HOH HOH . J 4 HOH A 28 428 58 HOH HOH . J 4 HOH A 29 429 59 HOH HOH . J 4 HOH A 30 430 60 HOH HOH . J 4 HOH A 31 431 64 HOH HOH . J 4 HOH A 32 432 68 HOH HOH . J 4 HOH A 33 433 69 HOH HOH . J 4 HOH A 34 434 70 HOH HOH . J 4 HOH A 35 435 71 HOH HOH . J 4 HOH A 36 436 72 HOH HOH . J 4 HOH A 37 437 73 HOH HOH . J 4 HOH A 38 438 74 HOH HOH . J 4 HOH A 39 439 75 HOH HOH . J 4 HOH A 40 440 78 HOH HOH . J 4 HOH A 41 441 80 HOH HOH . J 4 HOH A 42 442 81 HOH HOH . J 4 HOH A 43 443 82 HOH HOH . J 4 HOH A 44 444 85 HOH HOH . J 4 HOH A 45 445 89 HOH HOH . J 4 HOH A 46 446 90 HOH HOH . J 4 HOH A 47 447 92 HOH HOH . J 4 HOH A 48 448 97 HOH HOH . J 4 HOH A 49 449 102 HOH HOH . J 4 HOH A 50 450 106 HOH HOH . J 4 HOH A 51 451 108 HOH HOH . J 4 HOH A 52 452 111 HOH HOH . J 4 HOH A 53 453 112 HOH HOH . J 4 HOH A 54 454 113 HOH HOH . J 4 HOH A 55 455 115 HOH HOH . J 4 HOH A 56 456 116 HOH HOH . J 4 HOH A 57 457 121 HOH HOH . J 4 HOH A 58 458 122 HOH HOH . J 4 HOH A 59 459 126 HOH HOH . J 4 HOH A 60 460 130 HOH HOH . J 4 HOH A 61 461 131 HOH HOH . J 4 HOH A 62 462 134 HOH HOH . J 4 HOH A 63 463 136 HOH HOH . J 4 HOH A 64 464 138 HOH HOH . J 4 HOH A 65 465 141 HOH HOH . J 4 HOH A 66 466 143 HOH HOH . J 4 HOH A 67 467 145 HOH HOH . J 4 HOH A 68 468 147 HOH HOH . J 4 HOH A 69 469 156 HOH HOH . J 4 HOH A 70 470 159 HOH HOH . J 4 HOH A 71 471 171 HOH HOH . J 4 HOH A 72 472 172 HOH HOH . J 4 HOH A 73 473 175 HOH HOH . J 4 HOH A 74 474 184 HOH HOH . J 4 HOH A 75 475 193 HOH HOH . J 4 HOH A 76 476 201 HOH HOH . J 4 HOH A 77 477 206 HOH HOH . J 4 HOH A 78 478 207 HOH HOH . J 4 HOH A 79 479 211 HOH HOH . J 4 HOH A 80 480 212 HOH HOH . J 4 HOH A 81 481 213 HOH HOH . K 4 HOH B 1 401 3 HOH HOH . K 4 HOH B 2 402 7 HOH HOH . K 4 HOH B 3 403 8 HOH HOH . K 4 HOH B 4 404 10 HOH HOH . K 4 HOH B 5 405 11 HOH HOH . K 4 HOH B 6 406 12 HOH HOH . K 4 HOH B 7 407 13 HOH HOH . K 4 HOH B 8 408 17 HOH HOH . K 4 HOH B 9 409 19 HOH HOH . K 4 HOH B 10 410 20 HOH HOH . K 4 HOH B 11 411 21 HOH HOH . K 4 HOH B 12 412 22 HOH HOH . K 4 HOH B 13 413 25 HOH HOH . K 4 HOH B 14 414 31 HOH HOH . K 4 HOH B 15 415 32 HOH HOH . K 4 HOH B 16 416 35 HOH HOH . K 4 HOH B 17 417 37 HOH HOH . K 4 HOH B 18 418 39 HOH HOH . K 4 HOH B 19 419 40 HOH HOH . K 4 HOH B 20 420 41 HOH HOH . K 4 HOH B 21 421 42 HOH HOH . K 4 HOH B 22 422 47 HOH HOH . K 4 HOH B 23 423 48 HOH HOH . K 4 HOH B 24 424 49 HOH HOH . K 4 HOH B 25 425 55 HOH HOH . K 4 HOH B 26 426 57 HOH HOH . K 4 HOH B 27 427 61 HOH HOH . K 4 HOH B 28 428 62 HOH HOH . K 4 HOH B 29 429 63 HOH HOH . K 4 HOH B 30 430 65 HOH HOH . K 4 HOH B 31 431 66 HOH HOH . K 4 HOH B 32 432 67 HOH HOH . K 4 HOH B 33 433 76 HOH HOH . K 4 HOH B 34 434 77 HOH HOH . K 4 HOH B 35 435 79 HOH HOH . K 4 HOH B 36 436 83 HOH HOH . K 4 HOH B 37 437 84 HOH HOH . K 4 HOH B 38 438 86 HOH HOH . K 4 HOH B 39 439 87 HOH HOH . K 4 HOH B 40 440 91 HOH HOH . K 4 HOH B 41 441 93 HOH HOH . K 4 HOH B 42 442 94 HOH HOH . K 4 HOH B 43 443 96 HOH HOH . K 4 HOH B 44 444 100 HOH HOH . K 4 HOH B 45 445 101 HOH HOH . K 4 HOH B 46 446 103 HOH HOH . K 4 HOH B 47 447 104 HOH HOH . K 4 HOH B 48 448 105 HOH HOH . K 4 HOH B 49 449 107 HOH HOH . K 4 HOH B 50 450 109 HOH HOH . K 4 HOH B 51 451 110 HOH HOH . K 4 HOH B 52 452 119 HOH HOH . K 4 HOH B 53 453 124 HOH HOH . K 4 HOH B 54 454 128 HOH HOH . K 4 HOH B 55 455 132 HOH HOH . K 4 HOH B 56 456 133 HOH HOH . K 4 HOH B 57 457 135 HOH HOH . K 4 HOH B 58 458 137 HOH HOH . K 4 HOH B 59 459 139 HOH HOH . K 4 HOH B 60 460 144 HOH HOH . K 4 HOH B 61 461 146 HOH HOH . K 4 HOH B 62 462 148 HOH HOH . K 4 HOH B 63 463 149 HOH HOH . K 4 HOH B 64 464 150 HOH HOH . K 4 HOH B 65 465 154 HOH HOH . K 4 HOH B 66 466 155 HOH HOH . K 4 HOH B 67 467 158 HOH HOH . K 4 HOH B 68 468 167 HOH HOH . K 4 HOH B 69 469 180 HOH HOH . K 4 HOH B 70 470 187 HOH HOH . K 4 HOH B 71 471 191 HOH HOH . K 4 HOH B 72 472 194 HOH HOH . K 4 HOH B 73 473 195 HOH HOH . K 4 HOH B 74 474 198 HOH HOH . K 4 HOH B 75 475 202 HOH HOH . K 4 HOH B 76 476 214 HOH HOH . K 4 HOH B 77 477 216 HOH HOH . K 4 HOH B 78 478 217 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.313 _atom_site.Cartn_y -0.994 _atom_site.Cartn_z 32.528 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #