data_4GP1 # _model_server_result.job_id -sVSGt8lUGXOkFkrC43QVA _model_server_result.datetime_utc '2024-11-23 16:09:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gp1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4GP1 # _exptl.entry_id 4GP1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4GP1 _cell.length_a 60.598 _cell.length_b 89.393 _cell.length_c 148.806 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -74.403 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 249 n n O1 HO1 PG4 sing 250 n n C1 C2 PG4 sing 251 n n C1 H11 PG4 sing 252 n n C1 H12 PG4 sing 253 n n C2 O2 PG4 sing 254 n n C2 H21 PG4 sing 255 n n C2 H22 PG4 sing 256 n n O2 C3 PG4 sing 257 n n C3 C4 PG4 sing 258 n n C3 H31 PG4 sing 259 n n C3 H32 PG4 sing 260 n n C4 O3 PG4 sing 261 n n C4 H41 PG4 sing 262 n n C4 H42 PG4 sing 263 n n O3 C5 PG4 sing 264 n n C5 C6 PG4 sing 265 n n C5 H51 PG4 sing 266 n n C5 H52 PG4 sing 267 n n C6 O4 PG4 sing 268 n n C6 H61 PG4 sing 269 n n C6 H62 PG4 sing 270 n n O4 C7 PG4 sing 271 n n C7 C8 PG4 sing 272 n n C7 H71 PG4 sing 273 n n C7 H72 PG4 sing 274 n n C8 O5 PG4 sing 275 n n C8 H81 PG4 sing 276 n n C8 H82 PG4 sing 277 n n O5 HO5 PG4 sing 278 n n # _atom_sites.entry_id 4GP1 _atom_sites.fract_transf_matrix[1][1] 0.016502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00672 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 401 1 CL CL . C 3 DMA A 1 402 1 DMA DMA . D 4 PG4 A 1 403 1 PG4 PG4 . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 3 HOH HOH . E 5 HOH A 3 503 4 HOH HOH . E 5 HOH A 4 504 5 HOH HOH . E 5 HOH A 5 505 6 HOH HOH . E 5 HOH A 6 506 7 HOH HOH . E 5 HOH A 7 507 8 HOH HOH . E 5 HOH A 8 508 9 HOH HOH . E 5 HOH A 9 509 10 HOH HOH . E 5 HOH A 10 510 11 HOH HOH . E 5 HOH A 11 511 12 HOH HOH . E 5 HOH A 12 512 13 HOH HOH . E 5 HOH A 13 513 14 HOH HOH . E 5 HOH A 14 514 15 HOH HOH . E 5 HOH A 15 515 16 HOH HOH . E 5 HOH A 16 516 17 HOH HOH . E 5 HOH A 17 517 18 HOH HOH . E 5 HOH A 18 518 19 HOH HOH . E 5 HOH A 19 519 20 HOH HOH . E 5 HOH A 20 520 21 HOH HOH . E 5 HOH A 21 521 22 HOH HOH . E 5 HOH A 22 522 23 HOH HOH . E 5 HOH A 23 523 24 HOH HOH . E 5 HOH A 24 524 25 HOH HOH . E 5 HOH A 25 525 26 HOH HOH . E 5 HOH A 26 526 27 HOH HOH . E 5 HOH A 27 527 28 HOH HOH . E 5 HOH A 28 528 29 HOH HOH . E 5 HOH A 29 529 30 HOH HOH . E 5 HOH A 30 530 31 HOH HOH . E 5 HOH A 31 531 32 HOH HOH . E 5 HOH A 32 532 33 HOH HOH . E 5 HOH A 33 533 34 HOH HOH . E 5 HOH A 34 534 35 HOH HOH . E 5 HOH A 35 535 36 HOH HOH . E 5 HOH A 36 536 37 HOH HOH . E 5 HOH A 37 537 38 HOH HOH . E 5 HOH A 38 538 40 HOH HOH . E 5 HOH A 39 539 41 HOH HOH . E 5 HOH A 40 540 42 HOH HOH . E 5 HOH A 41 541 43 HOH HOH . E 5 HOH A 42 542 44 HOH HOH . E 5 HOH A 43 543 45 HOH HOH . E 5 HOH A 44 544 46 HOH HOH . E 5 HOH A 45 545 47 HOH HOH . E 5 HOH A 46 546 48 HOH HOH . E 5 HOH A 47 547 49 HOH HOH . E 5 HOH A 48 548 50 HOH HOH . E 5 HOH A 49 549 52 HOH HOH . E 5 HOH A 50 550 54 HOH HOH . E 5 HOH A 51 551 55 HOH HOH . E 5 HOH A 52 552 56 HOH HOH . E 5 HOH A 53 553 57 HOH HOH . E 5 HOH A 54 554 58 HOH HOH . E 5 HOH A 55 555 59 HOH HOH . E 5 HOH A 56 556 60 HOH HOH . E 5 HOH A 57 557 61 HOH HOH . E 5 HOH A 58 558 62 HOH HOH . E 5 HOH A 59 559 63 HOH HOH . E 5 HOH A 60 560 64 HOH HOH . E 5 HOH A 61 561 65 HOH HOH . E 5 HOH A 62 562 66 HOH HOH . E 5 HOH A 63 563 67 HOH HOH . E 5 HOH A 64 564 68 HOH HOH . E 5 HOH A 65 565 69 HOH HOH . E 5 HOH A 66 566 70 HOH HOH . E 5 HOH A 67 567 71 HOH HOH . E 5 HOH A 68 568 72 HOH HOH . E 5 HOH A 69 569 73 HOH HOH . E 5 HOH A 70 570 74 HOH HOH . E 5 HOH A 71 571 75 HOH HOH . E 5 HOH A 72 572 76 HOH HOH . E 5 HOH A 73 573 77 HOH HOH . E 5 HOH A 74 574 78 HOH HOH . E 5 HOH A 75 575 80 HOH HOH . E 5 HOH A 76 576 81 HOH HOH . E 5 HOH A 77 577 82 HOH HOH . E 5 HOH A 78 578 83 HOH HOH . E 5 HOH A 79 579 84 HOH HOH . E 5 HOH A 80 580 85 HOH HOH . E 5 HOH A 81 581 86 HOH HOH . E 5 HOH A 82 582 87 HOH HOH . E 5 HOH A 83 583 88 HOH HOH . E 5 HOH A 84 584 89 HOH HOH . E 5 HOH A 85 585 90 HOH HOH . E 5 HOH A 86 586 91 HOH HOH . E 5 HOH A 87 587 92 HOH HOH . E 5 HOH A 88 588 93 HOH HOH . E 5 HOH A 89 589 96 HOH HOH . E 5 HOH A 90 590 97 HOH HOH . E 5 HOH A 91 591 98 HOH HOH . E 5 HOH A 92 592 99 HOH HOH . E 5 HOH A 93 593 100 HOH HOH . E 5 HOH A 94 594 101 HOH HOH . E 5 HOH A 95 595 102 HOH HOH . E 5 HOH A 96 596 103 HOH HOH . E 5 HOH A 97 597 104 HOH HOH . E 5 HOH A 98 598 105 HOH HOH . E 5 HOH A 99 599 106 HOH HOH . E 5 HOH A 100 600 107 HOH HOH . E 5 HOH A 101 601 108 HOH HOH . E 5 HOH A 102 602 109 HOH HOH . E 5 HOH A 103 603 110 HOH HOH . E 5 HOH A 104 604 111 HOH HOH . E 5 HOH A 105 605 112 HOH HOH . E 5 HOH A 106 606 113 HOH HOH . E 5 HOH A 107 607 115 HOH HOH . E 5 HOH A 108 608 116 HOH HOH . E 5 HOH A 109 609 118 HOH HOH . E 5 HOH A 110 610 119 HOH HOH . E 5 HOH A 111 611 120 HOH HOH . E 5 HOH A 112 612 121 HOH HOH . E 5 HOH A 113 613 122 HOH HOH . E 5 HOH A 114 614 123 HOH HOH . E 5 HOH A 115 615 124 HOH HOH . E 5 HOH A 116 616 126 HOH HOH . E 5 HOH A 117 617 127 HOH HOH . E 5 HOH A 118 618 128 HOH HOH . E 5 HOH A 119 619 129 HOH HOH . E 5 HOH A 120 620 130 HOH HOH . E 5 HOH A 121 621 131 HOH HOH . E 5 HOH A 122 622 132 HOH HOH . E 5 HOH A 123 623 134 HOH HOH . E 5 HOH A 124 624 137 HOH HOH . E 5 HOH A 125 625 138 HOH HOH . E 5 HOH A 126 626 139 HOH HOH . E 5 HOH A 127 627 140 HOH HOH . E 5 HOH A 128 628 141 HOH HOH . E 5 HOH A 129 629 142 HOH HOH . E 5 HOH A 130 630 143 HOH HOH . E 5 HOH A 131 631 144 HOH HOH . E 5 HOH A 132 632 146 HOH HOH . E 5 HOH A 133 633 148 HOH HOH . E 5 HOH A 134 634 150 HOH HOH . E 5 HOH A 135 635 151 HOH HOH . E 5 HOH A 136 636 152 HOH HOH . E 5 HOH A 137 637 153 HOH HOH . E 5 HOH A 138 638 154 HOH HOH . E 5 HOH A 139 639 156 HOH HOH . E 5 HOH A 140 640 158 HOH HOH . E 5 HOH A 141 641 159 HOH HOH . E 5 HOH A 142 642 160 HOH HOH . E 5 HOH A 143 643 161 HOH HOH . E 5 HOH A 144 644 162 HOH HOH . E 5 HOH A 145 645 163 HOH HOH . E 5 HOH A 146 646 164 HOH HOH . E 5 HOH A 147 647 165 HOH HOH . E 5 HOH A 148 648 166 HOH HOH . E 5 HOH A 149 649 168 HOH HOH . E 5 HOH A 150 650 169 HOH HOH . E 5 HOH A 151 651 171 HOH HOH . E 5 HOH A 152 652 173 HOH HOH . E 5 HOH A 153 653 174 HOH HOH . E 5 HOH A 154 654 175 HOH HOH . E 5 HOH A 155 655 176 HOH HOH . E 5 HOH A 156 656 177 HOH HOH . E 5 HOH A 157 657 178 HOH HOH . E 5 HOH A 158 658 180 HOH HOH . E 5 HOH A 159 659 181 HOH HOH . E 5 HOH A 160 660 183 HOH HOH . E 5 HOH A 161 661 184 HOH HOH . E 5 HOH A 162 662 185 HOH HOH . E 5 HOH A 163 663 186 HOH HOH . E 5 HOH A 164 664 187 HOH HOH . E 5 HOH A 165 665 188 HOH HOH . E 5 HOH A 166 666 189 HOH HOH . E 5 HOH A 167 667 190 HOH HOH . E 5 HOH A 168 668 191 HOH HOH . E 5 HOH A 169 669 192 HOH HOH . E 5 HOH A 170 670 193 HOH HOH . E 5 HOH A 171 671 194 HOH HOH . E 5 HOH A 172 672 195 HOH HOH . E 5 HOH A 173 673 197 HOH HOH . E 5 HOH A 174 674 198 HOH HOH . E 5 HOH A 175 675 199 HOH HOH . E 5 HOH A 176 676 200 HOH HOH . E 5 HOH A 177 677 204 HOH HOH . E 5 HOH A 178 678 205 HOH HOH . E 5 HOH A 179 679 206 HOH HOH . E 5 HOH A 180 680 207 HOH HOH . E 5 HOH A 181 681 209 HOH HOH . E 5 HOH A 182 682 210 HOH HOH . E 5 HOH A 183 683 211 HOH HOH . E 5 HOH A 184 684 212 HOH HOH . E 5 HOH A 185 685 214 HOH HOH . E 5 HOH A 186 686 215 HOH HOH . E 5 HOH A 187 687 216 HOH HOH . E 5 HOH A 188 688 217 HOH HOH . E 5 HOH A 189 689 219 HOH HOH . E 5 HOH A 190 690 221 HOH HOH . E 5 HOH A 191 691 223 HOH HOH . E 5 HOH A 192 692 224 HOH HOH . E 5 HOH A 193 693 225 HOH HOH . E 5 HOH A 194 694 226 HOH HOH . E 5 HOH A 195 695 227 HOH HOH . E 5 HOH A 196 696 229 HOH HOH . E 5 HOH A 197 697 230 HOH HOH . E 5 HOH A 198 698 232 HOH HOH . E 5 HOH A 199 699 233 HOH HOH . E 5 HOH A 200 700 234 HOH HOH . E 5 HOH A 201 701 236 HOH HOH . E 5 HOH A 202 702 237 HOH HOH . E 5 HOH A 203 703 238 HOH HOH . E 5 HOH A 204 704 239 HOH HOH . E 5 HOH A 205 705 240 HOH HOH . E 5 HOH A 206 706 241 HOH HOH . E 5 HOH A 207 707 242 HOH HOH . E 5 HOH A 208 708 243 HOH HOH . E 5 HOH A 209 709 244 HOH HOH . E 5 HOH A 210 710 245 HOH HOH . E 5 HOH A 211 711 246 HOH HOH . E 5 HOH A 212 712 250 HOH HOH . E 5 HOH A 213 713 251 HOH HOH . E 5 HOH A 214 714 252 HOH HOH . E 5 HOH A 215 715 253 HOH HOH . E 5 HOH A 216 716 254 HOH HOH . E 5 HOH A 217 717 255 HOH HOH . E 5 HOH A 218 718 256 HOH HOH . E 5 HOH A 219 719 257 HOH HOH . E 5 HOH A 220 720 259 HOH HOH . E 5 HOH A 221 721 260 HOH HOH . E 5 HOH A 222 722 262 HOH HOH . E 5 HOH A 223 723 264 HOH HOH . E 5 HOH A 224 724 265 HOH HOH . E 5 HOH A 225 725 266 HOH HOH . E 5 HOH A 226 726 267 HOH HOH . E 5 HOH A 227 727 269 HOH HOH . E 5 HOH A 228 728 270 HOH HOH . E 5 HOH A 229 729 271 HOH HOH . E 5 HOH A 230 730 272 HOH HOH . E 5 HOH A 231 731 273 HOH HOH . E 5 HOH A 232 732 274 HOH HOH . E 5 HOH A 233 733 275 HOH HOH . E 5 HOH A 234 734 276 HOH HOH . E 5 HOH A 235 735 277 HOH HOH . E 5 HOH A 236 736 278 HOH HOH . E 5 HOH A 237 737 279 HOH HOH . E 5 HOH A 238 738 280 HOH HOH . E 5 HOH A 239 739 281 HOH HOH . E 5 HOH A 240 740 282 HOH HOH . E 5 HOH A 241 741 283 HOH HOH . E 5 HOH A 242 742 284 HOH HOH . E 5 HOH A 243 743 285 HOH HOH . E 5 HOH A 244 744 286 HOH HOH . E 5 HOH A 245 745 287 HOH HOH . E 5 HOH A 246 746 290 HOH HOH . E 5 HOH A 247 747 291 HOH HOH . E 5 HOH A 248 748 292 HOH HOH . E 5 HOH A 249 749 293 HOH HOH . E 5 HOH A 250 750 294 HOH HOH . E 5 HOH A 251 751 295 HOH HOH . E 5 HOH A 252 752 297 HOH HOH . E 5 HOH A 253 753 298 HOH HOH . E 5 HOH A 254 754 299 HOH HOH . E 5 HOH A 255 755 300 HOH HOH . E 5 HOH A 256 756 301 HOH HOH . E 5 HOH A 257 757 302 HOH HOH . E 5 HOH A 258 758 303 HOH HOH . E 5 HOH A 259 759 304 HOH HOH . E 5 HOH A 260 760 307 HOH HOH . E 5 HOH A 261 761 308 HOH HOH . E 5 HOH A 262 762 311 HOH HOH . E 5 HOH A 263 763 312 HOH HOH . E 5 HOH A 264 764 314 HOH HOH . E 5 HOH A 265 765 321 HOH HOH . E 5 HOH A 266 766 322 HOH HOH . E 5 HOH A 267 767 325 HOH HOH . E 5 HOH A 268 768 327 HOH HOH . E 5 HOH A 269 769 328 HOH HOH . E 5 HOH A 270 770 329 HOH HOH . E 5 HOH A 271 771 330 HOH HOH . E 5 HOH A 272 772 331 HOH HOH . E 5 HOH A 273 773 332 HOH HOH . E 5 HOH A 274 774 333 HOH HOH . E 5 HOH A 275 775 335 HOH HOH . E 5 HOH A 276 776 336 HOH HOH . E 5 HOH A 277 777 337 HOH HOH . E 5 HOH A 278 778 338 HOH HOH . E 5 HOH A 279 779 339 HOH HOH . E 5 HOH A 280 780 340 HOH HOH . E 5 HOH A 281 781 341 HOH HOH . E 5 HOH A 282 782 342 HOH HOH . E 5 HOH A 283 783 343 HOH HOH . E 5 HOH A 284 784 344 HOH HOH . E 5 HOH A 285 785 345 HOH HOH . E 5 HOH A 286 786 346 HOH HOH . E 5 HOH A 287 787 347 HOH HOH . E 5 HOH A 288 788 348 HOH HOH . E 5 HOH A 289 789 349 HOH HOH . E 5 HOH A 290 790 350 HOH HOH . E 5 HOH A 291 791 351 HOH HOH . E 5 HOH A 292 792 352 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 4 1.408 -10.499 -22.223 1 44.07 ? O1 PG4 403 A 1 HETATM 2 C C1 PG4 . . . D 4 0.903 -11.654 -22.942 1 45.57 ? C1 PG4 403 A 1 HETATM 3 C C2 PG4 . . . D 4 1.919 -12.781 -23.137 1 38.56 ? C2 PG4 403 A 1 HETATM 4 O O2 PG4 . . . D 4 1.795 -13.766 -22.09 1 71.5 ? O2 PG4 403 A 1 HETATM 5 C C3 PG4 . . . D 4 3.032 -14.362 -21.668 1 43.32 ? C3 PG4 403 A 1 HETATM 6 C C4 PG4 . . . D 4 2.94 -14.847 -20.205 1 54.8 ? C4 PG4 403 A 1 HETATM 7 O O3 PG4 . . . D 4 4.04 -15.714 -19.887 1 49.68 ? O3 PG4 403 A 1 HETATM 8 C C5 PG4 . . . D 4 3.78 -16.709 -18.878 1 54.81 ? C5 PG4 403 A 1 HETATM 9 C C6 PG4 . . . D 4 4.704 -17.923 -19.085 1 36.82 ? C6 PG4 403 A 1 HETATM 10 O O4 PG4 . . . D 4 3.974 -19.142 -19.246 1 50.22 ? O4 PG4 403 A 1 HETATM 11 C C7 PG4 . . . D 4 4.654 -20.149 -20.016 1 48.91 ? C7 PG4 403 A 1 HETATM 12 C C8 PG4 . . . D 4 3.749 -20.547 -21.186 1 40.23 ? C8 PG4 403 A 1 HETATM 13 O O5 PG4 . . . D 4 4.487 -21.048 -22.316 1 52.54 ? O5 PG4 403 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #