data_4GTE # _model_server_result.job_id L86_0wJ9FC5lckyjYrES3A _model_server_result.datetime_utc '2024-11-27 18:10:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 4GTE # _exptl.entry_id 4GTE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4GTE _cell.length_a 54.71 _cell.length_b 117.07 _cell.length_c 141.91 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 4GTE _atom_sites.fract_transf_matrix[1][1] 0.018278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 301 315 FAD FAD . F 2 FAD B 1 301 310 FAD FAD . G 3 MEF B 1 302 313 MEF MEF . H 2 FAD C 1 301 305 FAD FAD . I 2 FAD D 1 301 300 FAD FAD . J 3 MEF D 1 302 308 MEF MEF . K 4 HOH A 1 401 1 HOH HOH . K 4 HOH A 2 402 10 HOH HOH . K 4 HOH A 3 403 12 HOH HOH . K 4 HOH A 4 404 19 HOH HOH . K 4 HOH A 5 405 23 HOH HOH . K 4 HOH A 6 406 26 HOH HOH . K 4 HOH A 7 407 28 HOH HOH . K 4 HOH A 8 408 32 HOH HOH . K 4 HOH A 9 409 34 HOH HOH . K 4 HOH A 10 410 41 HOH HOH . K 4 HOH A 11 411 42 HOH HOH . K 4 HOH A 12 412 53 HOH HOH . K 4 HOH A 13 413 56 HOH HOH . K 4 HOH A 14 414 57 HOH HOH . K 4 HOH A 15 415 59 HOH HOH . K 4 HOH A 16 416 65 HOH HOH . K 4 HOH A 17 417 76 HOH HOH . K 4 HOH A 18 418 82 HOH HOH . K 4 HOH A 19 419 86 HOH HOH . K 4 HOH A 20 420 90 HOH HOH . K 4 HOH A 21 421 92 HOH HOH . K 4 HOH A 22 422 95 HOH HOH . K 4 HOH A 23 423 96 HOH HOH . K 4 HOH A 24 424 99 HOH HOH . K 4 HOH A 25 425 101 HOH HOH . K 4 HOH A 26 426 103 HOH HOH . K 4 HOH A 27 427 104 HOH HOH . K 4 HOH A 28 428 107 HOH HOH . K 4 HOH A 29 429 112 HOH HOH . K 4 HOH A 30 430 115 HOH HOH . K 4 HOH A 31 431 128 HOH HOH . K 4 HOH A 32 432 131 HOH HOH . K 4 HOH A 33 433 135 HOH HOH . K 4 HOH A 34 434 137 HOH HOH . K 4 HOH A 35 435 140 HOH HOH . K 4 HOH A 36 436 149 HOH HOH . K 4 HOH A 37 437 156 HOH HOH . K 4 HOH A 38 438 157 HOH HOH . K 4 HOH A 39 439 159 HOH HOH . K 4 HOH A 40 440 160 HOH HOH . K 4 HOH A 41 441 161 HOH HOH . K 4 HOH A 42 442 162 HOH HOH . L 4 HOH B 1 401 3 HOH HOH . L 4 HOH B 2 402 5 HOH HOH . L 4 HOH B 3 403 7 HOH HOH . L 4 HOH B 4 404 9 HOH HOH . L 4 HOH B 5 405 33 HOH HOH . L 4 HOH B 6 406 38 HOH HOH . L 4 HOH B 7 407 43 HOH HOH . L 4 HOH B 8 408 44 HOH HOH . L 4 HOH B 9 409 47 HOH HOH . L 4 HOH B 10 410 48 HOH HOH . L 4 HOH B 11 411 50 HOH HOH . L 4 HOH B 12 412 52 HOH HOH . L 4 HOH B 13 413 66 HOH HOH . L 4 HOH B 14 414 67 HOH HOH . L 4 HOH B 15 415 68 HOH HOH . L 4 HOH B 16 416 74 HOH HOH . L 4 HOH B 17 417 84 HOH HOH . L 4 HOH B 18 418 85 HOH HOH . L 4 HOH B 19 419 87 HOH HOH . L 4 HOH B 20 420 93 HOH HOH . L 4 HOH B 21 421 98 HOH HOH . L 4 HOH B 22 422 102 HOH HOH . L 4 HOH B 23 423 106 HOH HOH . L 4 HOH B 24 424 108 HOH HOH . L 4 HOH B 25 425 109 HOH HOH . L 4 HOH B 26 426 110 HOH HOH . L 4 HOH B 27 427 114 HOH HOH . L 4 HOH B 28 428 122 HOH HOH . L 4 HOH B 29 429 124 HOH HOH . L 4 HOH B 30 430 125 HOH HOH . L 4 HOH B 31 431 132 HOH HOH . L 4 HOH B 32 432 138 HOH HOH . L 4 HOH B 33 433 141 HOH HOH . L 4 HOH B 34 434 142 HOH HOH . L 4 HOH B 35 435 143 HOH HOH . L 4 HOH B 36 436 144 HOH HOH . L 4 HOH B 37 437 147 HOH HOH . L 4 HOH B 38 438 148 HOH HOH . M 4 HOH C 1 401 4 HOH HOH . M 4 HOH C 2 402 8 HOH HOH . M 4 HOH C 3 403 11 HOH HOH . M 4 HOH C 4 404 15 HOH HOH . M 4 HOH C 5 405 16 HOH HOH . M 4 HOH C 6 406 18 HOH HOH . M 4 HOH C 7 407 22 HOH HOH . M 4 HOH C 8 408 25 HOH HOH . M 4 HOH C 9 409 29 HOH HOH . M 4 HOH C 10 410 30 HOH HOH . M 4 HOH C 11 411 31 HOH HOH . M 4 HOH C 12 412 35 HOH HOH . M 4 HOH C 13 413 39 HOH HOH . M 4 HOH C 14 414 40 HOH HOH . M 4 HOH C 15 415 45 HOH HOH . M 4 HOH C 16 416 46 HOH HOH . M 4 HOH C 17 417 49 HOH HOH . M 4 HOH C 18 418 54 HOH HOH . M 4 HOH C 19 419 55 HOH HOH . M 4 HOH C 20 420 63 HOH HOH . M 4 HOH C 21 421 64 HOH HOH . M 4 HOH C 22 422 77 HOH HOH . M 4 HOH C 23 423 79 HOH HOH . M 4 HOH C 24 424 80 HOH HOH . M 4 HOH C 25 425 97 HOH HOH . M 4 HOH C 26 426 105 HOH HOH . M 4 HOH C 27 427 113 HOH HOH . M 4 HOH C 28 428 118 HOH HOH . M 4 HOH C 29 429 119 HOH HOH . M 4 HOH C 30 430 120 HOH HOH . M 4 HOH C 31 431 121 HOH HOH . M 4 HOH C 32 432 126 HOH HOH . M 4 HOH C 33 433 127 HOH HOH . M 4 HOH C 34 434 130 HOH HOH . M 4 HOH C 35 435 134 HOH HOH . M 4 HOH C 36 436 136 HOH HOH . M 4 HOH C 37 437 139 HOH HOH . M 4 HOH C 38 438 145 HOH HOH . M 4 HOH C 39 439 151 HOH HOH . M 4 HOH C 40 440 154 HOH HOH . M 4 HOH C 41 441 155 HOH HOH . M 4 HOH C 42 442 158 HOH HOH . N 4 HOH D 1 401 2 HOH HOH . N 4 HOH D 2 402 13 HOH HOH . N 4 HOH D 3 403 14 HOH HOH . N 4 HOH D 4 404 17 HOH HOH . N 4 HOH D 5 405 20 HOH HOH . N 4 HOH D 6 406 21 HOH HOH . N 4 HOH D 7 407 24 HOH HOH . N 4 HOH D 8 408 27 HOH HOH . N 4 HOH D 9 409 36 HOH HOH . N 4 HOH D 10 410 37 HOH HOH . N 4 HOH D 11 411 51 HOH HOH . N 4 HOH D 12 412 58 HOH HOH . N 4 HOH D 13 413 60 HOH HOH . N 4 HOH D 14 414 61 HOH HOH . N 4 HOH D 15 415 62 HOH HOH . N 4 HOH D 16 416 69 HOH HOH . N 4 HOH D 17 417 70 HOH HOH . N 4 HOH D 18 418 71 HOH HOH . N 4 HOH D 19 419 72 HOH HOH . N 4 HOH D 20 420 73 HOH HOH . N 4 HOH D 21 421 75 HOH HOH . N 4 HOH D 22 422 78 HOH HOH . N 4 HOH D 23 423 81 HOH HOH . N 4 HOH D 24 424 83 HOH HOH . N 4 HOH D 25 425 88 HOH HOH . N 4 HOH D 26 426 89 HOH HOH . N 4 HOH D 27 427 94 HOH HOH . N 4 HOH D 28 428 100 HOH HOH . N 4 HOH D 29 429 111 HOH HOH . N 4 HOH D 30 430 116 HOH HOH . N 4 HOH D 31 431 117 HOH HOH . N 4 HOH D 32 432 123 HOH HOH . N 4 HOH D 33 433 129 HOH HOH . N 4 HOH D 34 434 133 HOH HOH . N 4 HOH D 35 435 146 HOH HOH . N 4 HOH D 36 436 150 HOH HOH . N 4 HOH D 37 437 152 HOH HOH . N 4 HOH D 38 438 153 HOH HOH . N 4 HOH D 39 439 163 HOH HOH . N 4 HOH D 40 440 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . H 2 28.435 41.131 109.867 1 39.9 ? PA FAD 301 C 1 HETATM 2 O O1A FAD . . . H 2 28.504 39.791 110.724 1 28.42 ? O1A FAD 301 C 1 HETATM 3 O O2A FAD . . . H 2 29.412 41.662 108.901 1 29.04 ? O2A FAD 301 C 1 HETATM 4 O O5B FAD . . . H 2 27.996 42.275 110.919 1 45.32 ? O5B FAD 301 C 1 HETATM 5 C C5B FAD . . . H 2 26.978 41.929 111.864 1 46.78 ? C5B FAD 301 C 1 HETATM 6 C C4B FAD . . . H 2 26.55 43.214 112.538 1 47.9 ? C4B FAD 301 C 1 HETATM 7 O O4B FAD . . . H 2 27.679 43.865 113.107 1 48.62 ? O4B FAD 301 C 1 HETATM 8 C C3B FAD . . . H 2 25.987 44.161 111.504 1 50.56 ? C3B FAD 301 C 1 HETATM 9 O O3B FAD . . . H 2 24.591 43.867 111.369 1 52.77 ? O3B FAD 301 C 1 HETATM 10 C C2B FAD . . . H 2 26.388 45.542 112.023 1 50.04 ? C2B FAD 301 C 1 HETATM 11 O O2B FAD . . . H 2 25.503 46.07 113.021 1 52.38 ? O2B FAD 301 C 1 HETATM 12 C C1B FAD . . . H 2 27.683 45.261 112.726 1 48.34 ? C1B FAD 301 C 1 HETATM 13 N N9A FAD . . . H 2 28.952 45.582 112.028 1 45.41 ? N9A FAD 301 C 1 HETATM 14 C C8A FAD . . . H 2 29.991 44.739 111.752 1 43.54 ? C8A FAD 301 C 1 HETATM 15 N N7A FAD . . . H 2 31.056 45.42 111.218 1 42.59 ? N7A FAD 301 C 1 HETATM 16 C C5A FAD . . . H 2 30.68 46.732 111.18 1 41.95 ? C5A FAD 301 C 1 HETATM 17 C C6A FAD . . . H 2 31.272 47.922 110.776 1 39.06 ? C6A FAD 301 C 1 HETATM 18 N N6A FAD . . . H 2 32.524 47.919 110.273 1 41.65 ? N6A FAD 301 C 1 HETATM 19 N N1A FAD . . . H 2 30.583 49.064 110.935 1 39.66 ? N1A FAD 301 C 1 HETATM 20 C C2A FAD . . . H 2 29.331 49.119 111.436 1 39.44 ? C2A FAD 301 C 1 HETATM 21 N N3A FAD . . . H 2 28.67 48.019 111.861 1 41.94 ? N3A FAD 301 C 1 HETATM 22 C C4A FAD . . . H 2 29.304 46.821 111.737 1 43.01 ? C4A FAD 301 C 1 HETATM 23 C C1' FAD . . . H 2 26.309 41.353 101.283 1 55.66 ? C1' FAD 301 C 1 HETATM 24 C C2' FAD . . . H 2 25.5 41.972 102.428 1 54.71 ? C2' FAD 301 C 1 HETATM 25 O O2' FAD . . . H 2 25.22 43.323 102.082 1 57.46 ? O2' FAD 301 C 1 HETATM 26 C C3' FAD . . . H 2 26.217 42.053 103.789 1 53.98 ? C3' FAD 301 C 1 HETATM 27 O O3' FAD . . . H 2 27.626 42.232 103.6 1 53.53 ? O3' FAD 301 C 1 HETATM 28 C C4' FAD . . . H 2 26.002 40.799 104.614 1 52.84 ? C4' FAD 301 C 1 HETATM 29 O O4' FAD . . . H 2 24.583 40.592 104.793 1 55.13 ? O4' FAD 301 C 1 HETATM 30 C C5' FAD . . . H 2 26.73 40.897 105.953 1 51.23 ? C5' FAD 301 C 1 HETATM 31 O O5' FAD . . . H 2 25.819 41.415 106.917 1 48.97 ? O5' FAD 301 C 1 HETATM 32 P P FAD . . . H 2 26.292 42.271 108.193 1 47.94 ? P FAD 301 C 1 HETATM 33 O O1P FAD . . . H 2 27.225 43.391 107.753 1 44.19 ? O1P FAD 301 C 1 HETATM 34 O O2P FAD . . . H 2 25.009 42.675 108.924 1 48.04 ? O2P FAD 301 C 1 HETATM 35 O O3P FAD . . . H 2 26.998 41.095 109.059 1 42.69 ? O3P FAD 301 C 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #