data_4GUV # _model_server_result.job_id DqN5czfCED_fl5560vyjWQ _model_server_result.datetime_utc '2024-11-17 01:56:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4guv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4GUV # _exptl.entry_id 4GUV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 111.04 _cell.angle_beta 90.06 _cell.angle_gamma 93.29 _cell.entry_id 4GUV _cell.length_a 68.71 _cell.length_b 80.14 _cell.length_c 87.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GUV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,BA 1 1 B,J,K,L,M,N,O,CA 2 1 C,P,Q,R,S,T,U,DA 3 1 D,V,W,X,Y,Z,AA,EA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 J N N ? 2 P N N ? 2 V N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 4GUV _atom_sites.fract_transf_matrix[1][1] 0.014554 _atom_sites.fract_transf_matrix[1][2] 0.000836 _atom_sites.fract_transf_matrix[1][3] 0.000338 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012499 _atom_sites.fract_transf_matrix[2][3] 0.004818 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 401 1 FAD FAD . F 3 SO4 A 1 402 7 SO4 SO4 . G 3 SO4 A 1 403 14 SO4 SO4 . H 4 XE A 1 404 2 XE XE . I 4 XE A 1 405 6 XE XE . J 2 FAD B 1 401 2 FAD FAD . K 3 SO4 B 1 402 3 SO4 SO4 . L 3 SO4 B 1 403 8 SO4 SO4 . M 3 SO4 B 1 404 10 SO4 SO4 . N 4 XE B 1 405 3 XE XE . O 4 XE B 1 406 7 XE XE . P 2 FAD C 1 401 3 FAD FAD . Q 3 SO4 C 1 402 4 SO4 SO4 . R 3 SO4 C 1 403 5 SO4 SO4 . S 3 SO4 C 1 404 13 SO4 SO4 . T 4 XE C 1 405 4 XE XE . U 4 XE C 1 406 8 XE XE . V 2 FAD D 1 401 4 FAD FAD . W 3 SO4 D 1 402 2 SO4 SO4 . X 3 SO4 D 1 403 6 SO4 SO4 . Y 3 SO4 D 1 404 12 SO4 SO4 . Z 4 XE D 1 405 1 XE XE . AA 4 XE D 1 406 5 XE XE . BA 5 HOH A 1 501 4 HOH HOH . BA 5 HOH A 2 502 5 HOH HOH . BA 5 HOH A 3 503 6 HOH HOH . BA 5 HOH A 4 504 15 HOH HOH . BA 5 HOH A 5 505 19 HOH HOH . BA 5 HOH A 6 506 20 HOH HOH . BA 5 HOH A 7 507 22 HOH HOH . BA 5 HOH A 8 508 31 HOH HOH . BA 5 HOH A 9 509 42 HOH HOH . BA 5 HOH A 10 510 43 HOH HOH . BA 5 HOH A 11 511 44 HOH HOH . BA 5 HOH A 12 512 46 HOH HOH . BA 5 HOH A 13 513 47 HOH HOH . BA 5 HOH A 14 514 52 HOH HOH . BA 5 HOH A 15 515 66 HOH HOH . BA 5 HOH A 16 516 72 HOH HOH . BA 5 HOH A 17 517 73 HOH HOH . BA 5 HOH A 18 518 81 HOH HOH . BA 5 HOH A 19 519 82 HOH HOH . BA 5 HOH A 20 520 84 HOH HOH . BA 5 HOH A 21 521 85 HOH HOH . BA 5 HOH A 22 522 92 HOH HOH . BA 5 HOH A 23 523 93 HOH HOH . CA 5 HOH B 1 501 2 HOH HOH . CA 5 HOH B 2 502 7 HOH HOH . CA 5 HOH B 3 503 9 HOH HOH . CA 5 HOH B 4 504 11 HOH HOH . CA 5 HOH B 5 505 16 HOH HOH . CA 5 HOH B 6 506 18 HOH HOH . CA 5 HOH B 7 507 21 HOH HOH . CA 5 HOH B 8 508 23 HOH HOH . CA 5 HOH B 9 509 24 HOH HOH . CA 5 HOH B 10 510 26 HOH HOH . CA 5 HOH B 11 511 29 HOH HOH . CA 5 HOH B 12 512 33 HOH HOH . CA 5 HOH B 13 513 35 HOH HOH . CA 5 HOH B 14 514 38 HOH HOH . CA 5 HOH B 15 515 39 HOH HOH . CA 5 HOH B 16 516 40 HOH HOH . CA 5 HOH B 17 517 41 HOH HOH . CA 5 HOH B 18 518 48 HOH HOH . CA 5 HOH B 19 519 50 HOH HOH . CA 5 HOH B 20 520 55 HOH HOH . CA 5 HOH B 21 521 60 HOH HOH . CA 5 HOH B 22 522 65 HOH HOH . CA 5 HOH B 23 523 68 HOH HOH . CA 5 HOH B 24 524 69 HOH HOH . CA 5 HOH B 25 525 71 HOH HOH . CA 5 HOH B 26 526 74 HOH HOH . CA 5 HOH B 27 527 75 HOH HOH . CA 5 HOH B 28 528 76 HOH HOH . CA 5 HOH B 29 529 77 HOH HOH . CA 5 HOH B 30 530 78 HOH HOH . CA 5 HOH B 31 531 83 HOH HOH . CA 5 HOH B 32 532 86 HOH HOH . CA 5 HOH B 33 533 91 HOH HOH . DA 5 HOH C 1 501 1 HOH HOH . DA 5 HOH C 2 502 10 HOH HOH . DA 5 HOH C 3 503 14 HOH HOH . DA 5 HOH C 4 504 25 HOH HOH . DA 5 HOH C 5 505 30 HOH HOH . DA 5 HOH C 6 506 34 HOH HOH . DA 5 HOH C 7 507 45 HOH HOH . DA 5 HOH C 8 508 49 HOH HOH . DA 5 HOH C 9 509 51 HOH HOH . DA 5 HOH C 10 510 53 HOH HOH . DA 5 HOH C 11 511 54 HOH HOH . DA 5 HOH C 12 512 57 HOH HOH . DA 5 HOH C 13 513 58 HOH HOH . DA 5 HOH C 14 514 59 HOH HOH . DA 5 HOH C 15 515 61 HOH HOH . DA 5 HOH C 16 516 63 HOH HOH . DA 5 HOH C 17 517 67 HOH HOH . DA 5 HOH C 18 518 70 HOH HOH . DA 5 HOH C 19 519 79 HOH HOH . DA 5 HOH C 20 520 87 HOH HOH . DA 5 HOH C 21 521 88 HOH HOH . DA 5 HOH C 22 522 89 HOH HOH . DA 5 HOH C 23 523 90 HOH HOH . EA 5 HOH D 1 501 3 HOH HOH . EA 5 HOH D 2 502 8 HOH HOH . EA 5 HOH D 3 503 12 HOH HOH . EA 5 HOH D 4 504 13 HOH HOH . EA 5 HOH D 5 505 17 HOH HOH . EA 5 HOH D 6 506 27 HOH HOH . EA 5 HOH D 7 507 28 HOH HOH . EA 5 HOH D 8 508 36 HOH HOH . EA 5 HOH D 9 509 37 HOH HOH . EA 5 HOH D 10 510 56 HOH HOH . EA 5 HOH D 11 511 62 HOH HOH . EA 5 HOH D 12 512 64 HOH HOH . EA 5 HOH D 13 513 80 HOH HOH . EA 5 HOH D 14 514 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 -9.826 5.256 9.474 1 33.87 ? PA FAD 401 A 1 HETATM 2 O O1A FAD . . . E 2 -8.73 5.889 8.704 1 35.35 ? O1A FAD 401 A 1 HETATM 3 O O2A FAD . . . E 2 -9.394 4.384 10.602 1 33.26 ? O2A FAD 401 A 1 HETATM 4 O O5B FAD . . . E 2 -10.77 4.332 8.575 1 34.75 ? O5B FAD 401 A 1 HETATM 5 C C5B FAD . . . E 2 -11.307 4.703 7.326 1 33.88 ? C5B FAD 401 A 1 HETATM 6 C C4B FAD . . . E 2 -11.622 3.4 6.615 1 34.49 ? C4B FAD 401 A 1 HETATM 7 O O4B FAD . . . E 2 -12.137 3.748 5.33 1 35.47 ? O4B FAD 401 A 1 HETATM 8 C C3B FAD . . . E 2 -10.408 2.522 6.369 1 36.71 ? C3B FAD 401 A 1 HETATM 9 O O3B FAD . . . E 2 -10.881 1.192 6.58 1 42.61 ? O3B FAD 401 A 1 HETATM 10 C C2B FAD . . . E 2 -10.061 2.763 4.908 1 35.03 ? C2B FAD 401 A 1 HETATM 11 O O2B FAD . . . E 2 -9.553 1.603 4.252 1 28.83 ? O2B FAD 401 A 1 HETATM 12 C C1B FAD . . . E 2 -11.426 3.056 4.338 1 34.73 ? C1B FAD 401 A 1 HETATM 13 N N9A FAD . . . E 2 -11.394 3.892 3.15 1 37.2 ? N9A FAD 401 A 1 HETATM 14 C C8A FAD . . . E 2 -10.579 4.915 2.829 1 39.28 ? C8A FAD 401 A 1 HETATM 15 N N7A FAD . . . E 2 -10.906 5.42 1.592 1 40.2 ? N7A FAD 401 A 1 HETATM 16 C C5A FAD . . . E 2 -11.953 4.696 1.123 1 40.23 ? C5A FAD 401 A 1 HETATM 17 C C6A FAD . . . E 2 -12.843 4.646 -0.071 1 39.62 ? C6A FAD 401 A 1 HETATM 18 N N6A FAD . . . E 2 -12.711 5.467 -1.128 1 36.91 ? N6A FAD 401 A 1 HETATM 19 N N1A FAD . . . E 2 -13.829 3.719 -0.106 1 39.09 ? N1A FAD 401 A 1 HETATM 20 C C2A FAD . . . E 2 -14.045 2.845 0.875 1 39.99 ? C2A FAD 401 A 1 HETATM 21 N N3A FAD . . . E 2 -13.272 2.823 1.971 1 45.44 ? N3A FAD 401 A 1 HETATM 22 C C4A FAD . . . E 2 -12.254 3.705 2.165 1 40.32 ? C4A FAD 401 A 1 HETATM 23 N N1 FAD . . . E 2 -5.88 7.78 17.565 1 48.8 ? N1 FAD 401 A 1 HETATM 24 C C2 FAD . . . E 2 -6.029 7.42 18.837 1 51.06 ? C2 FAD 401 A 1 HETATM 25 O O2 FAD . . . E 2 -7.176 7.45 19.3 1 58.57 ? O2 FAD 401 A 1 HETATM 26 N N3 FAD . . . E 2 -5.028 7.025 19.617 1 53.2 ? N3 FAD 401 A 1 HETATM 27 C C4 FAD . . . E 2 -3.761 6.987 19.2 1 52.32 ? C4 FAD 401 A 1 HETATM 28 O O4 FAD . . . E 2 -2.832 6.61 19.959 1 48.36 ? O4 FAD 401 A 1 HETATM 29 C C4X FAD . . . E 2 -3.492 7.38 17.801 1 50.22 ? C4X FAD 401 A 1 HETATM 30 N N5 FAD . . . E 2 -2.238 7.372 17.263 1 49.92 ? N5 FAD 401 A 1 HETATM 31 C C5X FAD . . . E 2 -2.027 7.746 15.964 1 50.24 ? C5X FAD 401 A 1 HETATM 32 C C6 FAD . . . E 2 -0.737 7.764 15.435 1 48.31 ? C6 FAD 401 A 1 HETATM 33 C C7 FAD . . . E 2 -0.496 8.154 14.117 1 51.12 ? C7 FAD 401 A 1 HETATM 34 C C7M FAD . . . E 2 0.925 8.125 13.594 1 49.34 ? C7M FAD 401 A 1 HETATM 35 C C8 FAD . . . E 2 -1.647 8.578 13.257 1 52.11 ? C8 FAD 401 A 1 HETATM 36 C C8M FAD . . . E 2 -1.472 9.018 11.822 1 48.35 ? C8M FAD 401 A 1 HETATM 37 C C9 FAD . . . E 2 -2.937 8.58 13.793 1 54.01 ? C9 FAD 401 A 1 HETATM 38 C C9A FAD . . . E 2 -3.184 8.178 15.105 1 49.05 ? C9A FAD 401 A 1 HETATM 39 N N10 FAD . . . E 2 -4.494 8.186 15.651 1 47.31 ? N10 FAD 401 A 1 HETATM 40 C C10 FAD . . . E 2 -4.672 7.78 16.993 1 49.18 ? C10 FAD 401 A 1 HETATM 41 C C1' FAD . . . E 2 -5.654 8.59 14.869 1 46.82 ? C1' FAD 401 A 1 HETATM 42 C C2' FAD . . . E 2 -6.574 7.365 14.735 1 44.63 ? C2' FAD 401 A 1 HETATM 43 O O2' FAD . . . E 2 -5.895 6.221 14.143 1 47.49 ? O2' FAD 401 A 1 HETATM 44 C C3' FAD . . . E 2 -7.813 7.742 13.94 1 39.18 ? C3' FAD 401 A 1 HETATM 45 O O3' FAD . . . E 2 -8.508 8.749 14.626 1 34.56 ? O3' FAD 401 A 1 HETATM 46 C C4' FAD . . . E 2 -8.822 6.628 13.714 1 41.95 ? C4' FAD 401 A 1 HETATM 47 O O4' FAD . . . E 2 -8.265 5.464 13.048 1 37.01 ? O4' FAD 401 A 1 HETATM 48 C C5' FAD . . . E 2 -9.898 7.253 12.833 1 42 ? C5' FAD 401 A 1 HETATM 49 O O5' FAD . . . E 2 -10.782 6.196 12.496 1 43.44 ? O5' FAD 401 A 1 HETATM 50 P P FAD . . . E 2 -11.742 6.374 11.272 1 37.52 ? P FAD 401 A 1 HETATM 51 O O1P FAD . . . E 2 -12.542 5.094 11.127 1 37.58 ? O1P FAD 401 A 1 HETATM 52 O O2P FAD . . . E 2 -12.437 7.713 11.276 1 38.7 ? O2P FAD 401 A 1 HETATM 53 O O3P FAD . . . E 2 -10.793 6.453 9.981 1 37.74 ? O3P FAD 401 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 372 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 53 #