data_4GV2 # _model_server_result.job_id GjHviBwCjLo6DZRLXhWPog _model_server_result.datetime_utc '2024-11-05 14:55:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gv2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4GV2 # _exptl.entry_id 4GV2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 322.361 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(4-oxo-3,4-dihydroquinazolin-2-yl)-N-[(1R)-1-(pyridin-2-yl)ethyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.66 _cell.angle_gamma 90 _cell.entry_id 4GV2 _cell.length_a 55.188 _cell.length_b 56.784 _cell.length_c 56.618 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GV2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H18 N4 O2' _chem_comp.formula_weight 322.361 _chem_comp.id 5ME _chem_comp.mon_nstd_flag . _chem_comp.name 3-(4-oxo-3,4-dihydroquinazolin-2-yl)-N-[(1R)-1-(pyridin-2-yl)ethyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAH CAL 5ME doub 1 n y CAH CAG 5ME sing 2 n y CAL CAX 5ME sing 3 n y CAG CAK 5ME doub 4 n y CAX CAV 5ME sing 5 n n CAX CAW 5ME doub 6 n y CAK CAW 5ME sing 7 n y OAD CAV 5ME doub 8 n n CAV NAR 5ME sing 9 n n CAW NAP 5ME sing 10 n n OAC CAS 5ME doub 11 n n CAI NAO 5ME doub 12 n y CAI CAE 5ME sing 13 n y NAO CAU 5ME sing 14 n y NAR CAT 5ME sing 15 n n NAP CAT 5ME doub 16 n n CAT CAN 5ME sing 17 n n CAE CAF 5ME doub 18 n y CAS NAQ 5ME sing 19 n n CAS CAM 5ME sing 20 n n CAU CAY 5ME sing 21 n n CAU CAJ 5ME doub 22 n y CAY NAQ 5ME sing 23 n n CAY CAA 5ME sing 24 n n CAN CAM 5ME sing 25 n n CAF CAJ 5ME sing 26 n y CAJ H1 5ME sing 27 n n CAF H2 5ME sing 28 n n CAE H3 5ME sing 29 n n CAI H4 5ME sing 30 n n CAY H5 5ME sing 31 n n CAA H6 5ME sing 32 n n CAA H7 5ME sing 33 n n CAA H8 5ME sing 34 n n NAQ H9 5ME sing 35 n n CAM H10 5ME sing 36 n n CAM H11 5ME sing 37 n n CAN H12 5ME sing 38 n n CAN H13 5ME sing 39 n n CAK H15 5ME sing 40 n n CAG H16 5ME sing 41 n n CAH H17 5ME sing 42 n n CAL H18 5ME sing 43 n n NAR H14 5ME sing 44 n n # _atom_sites.entry_id 4GV2 _atom_sites.fract_transf_matrix[1][1] 0.01812 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007564 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5ME A 1 601 1 5ME ME5 . C 3 DMS A 1 602 700 DMS DMS . D 4 HOH A 1 701 1 HOH HOH . D 4 HOH A 2 702 2 HOH HOH . D 4 HOH A 3 703 3 HOH HOH . D 4 HOH A 4 704 4 HOH HOH . D 4 HOH A 5 705 5 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 7 HOH HOH . D 4 HOH A 8 708 8 HOH HOH . D 4 HOH A 9 709 9 HOH HOH . D 4 HOH A 10 710 10 HOH HOH . D 4 HOH A 11 711 11 HOH HOH . D 4 HOH A 12 712 12 HOH HOH . D 4 HOH A 13 713 13 HOH HOH . D 4 HOH A 14 714 14 HOH HOH . D 4 HOH A 15 715 15 HOH HOH . D 4 HOH A 16 716 16 HOH HOH . D 4 HOH A 17 717 17 HOH HOH . D 4 HOH A 18 718 18 HOH HOH . D 4 HOH A 19 719 19 HOH HOH . D 4 HOH A 20 720 20 HOH HOH . D 4 HOH A 21 721 21 HOH HOH . D 4 HOH A 22 722 22 HOH HOH . D 4 HOH A 23 723 23 HOH HOH . D 4 HOH A 24 724 24 HOH HOH . D 4 HOH A 25 725 25 HOH HOH . D 4 HOH A 26 726 26 HOH HOH . D 4 HOH A 27 727 27 HOH HOH . D 4 HOH A 28 728 28 HOH HOH . D 4 HOH A 29 729 29 HOH HOH . D 4 HOH A 30 730 30 HOH HOH . D 4 HOH A 31 731 31 HOH HOH . D 4 HOH A 32 732 32 HOH HOH . D 4 HOH A 33 733 33 HOH HOH . D 4 HOH A 34 734 34 HOH HOH . D 4 HOH A 35 735 35 HOH HOH . D 4 HOH A 36 736 36 HOH HOH . D 4 HOH A 37 737 37 HOH HOH . D 4 HOH A 38 738 38 HOH HOH . D 4 HOH A 39 739 39 HOH HOH . D 4 HOH A 40 740 40 HOH HOH . D 4 HOH A 41 741 41 HOH HOH . D 4 HOH A 42 742 42 HOH HOH . D 4 HOH A 43 743 43 HOH HOH . D 4 HOH A 44 744 44 HOH HOH . D 4 HOH A 45 745 45 HOH HOH . D 4 HOH A 46 746 46 HOH HOH . D 4 HOH A 47 747 47 HOH HOH . D 4 HOH A 48 748 48 HOH HOH . D 4 HOH A 49 749 49 HOH HOH . D 4 HOH A 50 750 50 HOH HOH . D 4 HOH A 51 751 51 HOH HOH . D 4 HOH A 52 752 52 HOH HOH . D 4 HOH A 53 753 53 HOH HOH . D 4 HOH A 54 754 54 HOH HOH . D 4 HOH A 55 755 55 HOH HOH . D 4 HOH A 56 756 56 HOH HOH . D 4 HOH A 57 757 57 HOH HOH . D 4 HOH A 58 758 58 HOH HOH . D 4 HOH A 59 759 59 HOH HOH . D 4 HOH A 60 760 60 HOH HOH . D 4 HOH A 61 761 61 HOH HOH . D 4 HOH A 62 762 62 HOH HOH . D 4 HOH A 63 763 63 HOH HOH . D 4 HOH A 64 764 64 HOH HOH . D 4 HOH A 65 765 65 HOH HOH . D 4 HOH A 66 766 66 HOH HOH . D 4 HOH A 67 767 67 HOH HOH . D 4 HOH A 68 768 68 HOH HOH . D 4 HOH A 69 769 69 HOH HOH . D 4 HOH A 70 770 70 HOH HOH . D 4 HOH A 71 771 71 HOH HOH . D 4 HOH A 72 772 72 HOH HOH . D 4 HOH A 73 773 73 HOH HOH . D 4 HOH A 74 774 74 HOH HOH . D 4 HOH A 75 775 75 HOH HOH . D 4 HOH A 76 776 76 HOH HOH . D 4 HOH A 77 777 77 HOH HOH . D 4 HOH A 78 778 78 HOH HOH . D 4 HOH A 79 779 79 HOH HOH . D 4 HOH A 80 780 80 HOH HOH . D 4 HOH A 81 781 81 HOH HOH . D 4 HOH A 82 782 82 HOH HOH . D 4 HOH A 83 783 83 HOH HOH . D 4 HOH A 84 784 84 HOH HOH . D 4 HOH A 85 785 85 HOH HOH . D 4 HOH A 86 786 86 HOH HOH . D 4 HOH A 87 787 87 HOH HOH . D 4 HOH A 88 788 88 HOH HOH . D 4 HOH A 89 789 89 HOH HOH . D 4 HOH A 90 790 90 HOH HOH . D 4 HOH A 91 791 91 HOH HOH . D 4 HOH A 92 792 92 HOH HOH . D 4 HOH A 93 793 93 HOH HOH . D 4 HOH A 94 794 94 HOH HOH . D 4 HOH A 95 795 95 HOH HOH . D 4 HOH A 96 796 96 HOH HOH . D 4 HOH A 97 797 97 HOH HOH . D 4 HOH A 98 798 98 HOH HOH . D 4 HOH A 99 799 99 HOH HOH . D 4 HOH A 100 800 100 HOH HOH . D 4 HOH A 101 801 101 HOH HOH . D 4 HOH A 102 802 102 HOH HOH . D 4 HOH A 103 803 103 HOH HOH . D 4 HOH A 104 804 104 HOH HOH . D 4 HOH A 105 805 105 HOH HOH . D 4 HOH A 106 806 106 HOH HOH . D 4 HOH A 107 807 107 HOH HOH . D 4 HOH A 108 808 108 HOH HOH . D 4 HOH A 109 809 109 HOH HOH . D 4 HOH A 110 810 110 HOH HOH . D 4 HOH A 111 811 111 HOH HOH . D 4 HOH A 112 812 112 HOH HOH . D 4 HOH A 113 813 113 HOH HOH . D 4 HOH A 114 814 114 HOH HOH . D 4 HOH A 115 815 115 HOH HOH . D 4 HOH A 116 816 116 HOH HOH . D 4 HOH A 117 817 117 HOH HOH . D 4 HOH A 118 818 118 HOH HOH . D 4 HOH A 119 819 119 HOH HOH . D 4 HOH A 120 820 120 HOH HOH . D 4 HOH A 121 821 121 HOH HOH . D 4 HOH A 122 822 122 HOH HOH . D 4 HOH A 123 823 123 HOH HOH . D 4 HOH A 124 824 124 HOH HOH . D 4 HOH A 125 825 125 HOH HOH . D 4 HOH A 126 826 126 HOH HOH . D 4 HOH A 127 827 127 HOH HOH . D 4 HOH A 128 828 128 HOH HOH . D 4 HOH A 129 829 129 HOH HOH . D 4 HOH A 130 830 130 HOH HOH . D 4 HOH A 131 831 131 HOH HOH . D 4 HOH A 132 832 132 HOH HOH . D 4 HOH A 133 833 133 HOH HOH . D 4 HOH A 134 834 134 HOH HOH . D 4 HOH A 135 835 135 HOH HOH . D 4 HOH A 136 836 136 HOH HOH . D 4 HOH A 137 837 137 HOH HOH . D 4 HOH A 138 838 138 HOH HOH . D 4 HOH A 139 839 139 HOH HOH . D 4 HOH A 140 840 140 HOH HOH . D 4 HOH A 141 841 141 HOH HOH . D 4 HOH A 142 842 142 HOH HOH . D 4 HOH A 143 843 143 HOH HOH . D 4 HOH A 144 844 144 HOH HOH . D 4 HOH A 145 845 145 HOH HOH . D 4 HOH A 146 846 146 HOH HOH . D 4 HOH A 147 847 147 HOH HOH . D 4 HOH A 148 848 148 HOH HOH . D 4 HOH A 149 849 149 HOH HOH . D 4 HOH A 150 850 150 HOH HOH . D 4 HOH A 151 851 151 HOH HOH . D 4 HOH A 152 852 152 HOH HOH . D 4 HOH A 153 853 153 HOH HOH . D 4 HOH A 154 854 154 HOH HOH . D 4 HOH A 155 855 155 HOH HOH . D 4 HOH A 156 856 156 HOH HOH . D 4 HOH A 157 857 157 HOH HOH . D 4 HOH A 158 858 158 HOH HOH . D 4 HOH A 159 859 159 HOH HOH . D 4 HOH A 160 860 160 HOH HOH . D 4 HOH A 161 861 161 HOH HOH . D 4 HOH A 162 862 162 HOH HOH . D 4 HOH A 163 863 163 HOH HOH . D 4 HOH A 164 864 164 HOH HOH . D 4 HOH A 165 865 165 HOH HOH . D 4 HOH A 166 866 166 HOH HOH . D 4 HOH A 167 867 167 HOH HOH . D 4 HOH A 168 868 168 HOH HOH . D 4 HOH A 169 869 169 HOH HOH . D 4 HOH A 170 870 170 HOH HOH . D 4 HOH A 171 871 171 HOH HOH . D 4 HOH A 172 872 172 HOH HOH . D 4 HOH A 173 873 173 HOH HOH . D 4 HOH A 174 874 174 HOH HOH . D 4 HOH A 175 875 175 HOH HOH . D 4 HOH A 176 876 176 HOH HOH . D 4 HOH A 177 877 177 HOH HOH . D 4 HOH A 178 878 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAJ 5ME . . . B 2 -3.837 -0.687 13.838 1 23.34 ? CAJ 5ME 601 A 1 HETATM 2 C CAF 5ME . . . B 2 -3.295 0.588 13.621 1 19.99 ? CAF 5ME 601 A 1 HETATM 3 C CAE 5ME . . . B 2 -2.502 0.8 12.51 1 23.93 ? CAE 5ME 601 A 1 HETATM 4 C CAI 5ME . . . B 2 -2.246 -0.26 11.644 1 24.5 ? CAI 5ME 601 A 1 HETATM 5 N NAO 5ME . . . B 2 -2.8 -1.562 11.858 1 20.68 ? NAO 5ME 601 A 1 HETATM 6 C CAU 5ME . . . B 2 -3.6 -1.731 12.924 1 23.58 ? CAU 5ME 601 A 1 HETATM 7 C CAY 5ME . . . B 2 -4.079 -3 13.099 1 25.41 ? CAY 5ME 601 A 1 HETATM 8 C CAA 5ME . . . B 2 -3.461 -3.475 14.468 1 27.72 ? CAA 5ME 601 A 1 HETATM 9 N NAQ 5ME . . . B 2 -5.51 -3.225 13.256 1 25.43 ? NAQ 5ME 601 A 1 HETATM 10 C CAS 5ME . . . B 2 -6.339 -4.036 12.542 1 27.53 ? CAS 5ME 601 A 1 HETATM 11 O OAC 5ME . . . B 2 -6.207 -4.557 11.438 1 27.32 ? OAC 5ME 601 A 1 HETATM 12 C CAM 5ME . . . B 2 -7.498 -4.314 13.458 1 26.52 ? CAM 5ME 601 A 1 HETATM 13 C CAN 5ME . . . B 2 -8.843 -4.796 13.211 1 17.44 ? CAN 5ME 601 A 1 HETATM 14 C CAT 5ME . . . B 2 -9.437 -5.706 12.401 1 14.03 ? CAT 5ME 601 A 1 HETATM 15 N NAP 5ME . . . B 2 -9.034 -6.964 12.137 1 13.63 ? NAP 5ME 601 A 1 HETATM 16 C CAW 5ME . . . B 2 -9.865 -7.765 11.404 1 9.93 ? CAW 5ME 601 A 1 HETATM 17 C CAK 5ME . . . B 2 -9.438 -9.066 11.098 1 9.75 ? CAK 5ME 601 A 1 HETATM 18 C CAG 5ME . . . B 2 -10.276 -9.894 10.396 1 8.49 ? CAG 5ME 601 A 1 HETATM 19 C CAH 5ME . . . B 2 -11.527 -9.468 9.973 1 7.73 ? CAH 5ME 601 A 1 HETATM 20 C CAL 5ME . . . B 2 -11.964 -8.17 10.331 1 9.62 ? CAL 5ME 601 A 1 HETATM 21 C CAX 5ME . . . B 2 -11.13 -7.345 11.029 1 8.33 ? CAX 5ME 601 A 1 HETATM 22 C CAV 5ME . . . B 2 -11.542 -6.049 11.37 1 9.24 ? CAV 5ME 601 A 1 HETATM 23 O OAD 5ME . . . B 2 -12.653 -5.579 11.141 1 6.69 ? OAD 5ME 601 A 1 HETATM 24 N NAR 5ME . . . B 2 -10.669 -5.288 12.093 1 8.69 ? NAR 5ME 601 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #