data_4GX6 # _model_server_result.job_id f0SvE2T12NmRqcpwTN5u7g _model_server_result.datetime_utc '2024-11-22 13:43:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 4GX6 # _exptl.entry_id 4GX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4GX6 _cell.length_a 59.923 _cell.length_b 165.341 _cell.length_c 79.112 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 97 A GLU 97 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc2 A OD2 ASP 118 A ASP 118 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc3 A OD1 ASP 118 A ASP 118 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc4 A O LEU 120 A LEU 120 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc5 A OD2 ASP 121 A ASP 121 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc6 A OE2 GLU 280 A GLU 280 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc7 C O1 F6P . A F6P 401 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc8 D MG MG . A MG 402 1_555 G O2 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc9 E MG MG . A MG 403 1_555 G O2 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc10 E MG MG . A MG 403 1_555 G O1 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc11 B OE1 GLU 97 B GLU 97 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc12 B OE2 GLU 97 B GLU 97 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc13 B OD2 ASP 118 B ASP 118 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc14 B OD1 ASP 118 B ASP 118 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc15 B O LEU 120 B LEU 120 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc16 B OD2 ASP 121 B ASP 121 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc17 B OE2 GLU 280 B GLU 280 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc18 H O1 F6P . B F6P 401 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc19 I MG MG . B MG 402 1_555 L O3 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc20 I MG MG . B MG 402 1_555 L O4 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc21 J MG MG . B MG 403 1_555 L O4 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 328 n n P O2 PO4 sing 329 n n P O3 PO4 sing 330 n n P O4 PO4 sing 331 n n # _atom_sites.entry_id 4GX6 _atom_sites.fract_transf_matrix[1][1] 0.016688 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01264 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 F6P A 1 401 338 F6P F6P . D 3 MG A 1 402 339 MG MG . E 3 MG A 1 403 340 MG MG . F 4 AMP A 1 404 341 AMP AMP . G 5 PO4 A 1 405 343 PO4 PO4 . H 2 F6P B 1 401 341 F6P F6P . I 3 MG B 1 402 344 MG MG . J 3 MG B 1 403 345 MG MG . K 4 AMP B 1 404 342 AMP AMP . L 5 PO4 B 1 405 343 PO4 PO4 . M 6 HOH A 1 501 501 HOH HOH . M 6 HOH A 2 502 502 HOH HOH . M 6 HOH A 3 503 503 HOH HOH . M 6 HOH A 4 504 504 HOH HOH . M 6 HOH A 5 505 506 HOH HOH . M 6 HOH A 6 506 508 HOH HOH . M 6 HOH A 7 507 509 HOH HOH . M 6 HOH A 8 508 510 HOH HOH . M 6 HOH A 9 509 511 HOH HOH . M 6 HOH A 10 510 512 HOH HOH . M 6 HOH A 11 511 513 HOH HOH . M 6 HOH A 12 512 514 HOH HOH . M 6 HOH A 13 513 515 HOH HOH . M 6 HOH A 14 514 516 HOH HOH . M 6 HOH A 15 515 517 HOH HOH . M 6 HOH A 16 516 518 HOH HOH . M 6 HOH A 17 517 519 HOH HOH . M 6 HOH A 18 518 520 HOH HOH . M 6 HOH A 19 519 521 HOH HOH . M 6 HOH A 20 520 523 HOH HOH . M 6 HOH A 21 521 524 HOH HOH . M 6 HOH A 22 522 526 HOH HOH . M 6 HOH A 23 523 527 HOH HOH . M 6 HOH A 24 524 546 HOH HOH . M 6 HOH A 25 525 553 HOH HOH . M 6 HOH A 26 526 555 HOH HOH . M 6 HOH A 27 527 556 HOH HOH . M 6 HOH A 28 528 557 HOH HOH . M 6 HOH A 29 529 558 HOH HOH . M 6 HOH A 30 530 563 HOH HOH . M 6 HOH A 31 531 564 HOH HOH . M 6 HOH A 32 532 565 HOH HOH . M 6 HOH A 33 533 568 HOH HOH . M 6 HOH A 34 534 570 HOH HOH . M 6 HOH A 35 535 571 HOH HOH . M 6 HOH A 36 536 574 HOH HOH . M 6 HOH A 37 537 575 HOH HOH . M 6 HOH A 38 538 576 HOH HOH . M 6 HOH A 39 539 577 HOH HOH . M 6 HOH A 40 540 578 HOH HOH . M 6 HOH A 41 541 579 HOH HOH . M 6 HOH A 42 542 580 HOH HOH . M 6 HOH A 43 543 581 HOH HOH . M 6 HOH A 44 544 585 HOH HOH . M 6 HOH A 45 545 586 HOH HOH . M 6 HOH A 46 546 589 HOH HOH . M 6 HOH A 47 547 590 HOH HOH . M 6 HOH A 48 548 592 HOH HOH . M 6 HOH A 49 549 593 HOH HOH . M 6 HOH A 50 550 595 HOH HOH . M 6 HOH A 51 551 598 HOH HOH . M 6 HOH A 52 552 600 HOH HOH . M 6 HOH A 53 553 603 HOH HOH . M 6 HOH A 54 554 604 HOH HOH . M 6 HOH A 55 555 605 HOH HOH . M 6 HOH A 56 556 606 HOH HOH . M 6 HOH A 57 557 607 HOH HOH . M 6 HOH A 58 558 608 HOH HOH . M 6 HOH A 59 559 610 HOH HOH . M 6 HOH A 60 560 611 HOH HOH . M 6 HOH A 61 561 612 HOH HOH . M 6 HOH A 62 562 613 HOH HOH . M 6 HOH A 63 563 614 HOH HOH . M 6 HOH A 64 564 618 HOH HOH . M 6 HOH A 65 565 620 HOH HOH . M 6 HOH A 66 566 623 HOH HOH . M 6 HOH A 67 567 626 HOH HOH . M 6 HOH A 68 568 627 HOH HOH . M 6 HOH A 69 569 631 HOH HOH . M 6 HOH A 70 570 633 HOH HOH . M 6 HOH A 71 571 635 HOH HOH . M 6 HOH A 72 572 638 HOH HOH . M 6 HOH A 73 573 640 HOH HOH . M 6 HOH A 74 574 641 HOH HOH . M 6 HOH A 75 575 642 HOH HOH . M 6 HOH A 76 576 649 HOH HOH . M 6 HOH A 77 577 650 HOH HOH . M 6 HOH A 78 578 651 HOH HOH . M 6 HOH A 79 579 654 HOH HOH . M 6 HOH A 80 580 655 HOH HOH . M 6 HOH A 81 581 656 HOH HOH . M 6 HOH A 82 582 662 HOH HOH . M 6 HOH A 83 583 663 HOH HOH . M 6 HOH A 84 584 667 HOH HOH . M 6 HOH A 85 585 669 HOH HOH . M 6 HOH A 86 586 672 HOH HOH . M 6 HOH A 87 587 674 HOH HOH . M 6 HOH A 88 588 677 HOH HOH . M 6 HOH A 89 589 678 HOH HOH . M 6 HOH A 90 590 679 HOH HOH . M 6 HOH A 91 591 680 HOH HOH . M 6 HOH A 92 592 683 HOH HOH . M 6 HOH A 93 593 684 HOH HOH . M 6 HOH A 94 594 685 HOH HOH . M 6 HOH A 95 595 686 HOH HOH . M 6 HOH A 96 596 687 HOH HOH . M 6 HOH A 97 597 689 HOH HOH . M 6 HOH A 98 598 691 HOH HOH . M 6 HOH A 99 599 692 HOH HOH . M 6 HOH A 100 600 696 HOH HOH . M 6 HOH A 101 601 699 HOH HOH . M 6 HOH A 102 602 701 HOH HOH . M 6 HOH A 103 603 709 HOH HOH . M 6 HOH A 104 604 715 HOH HOH . M 6 HOH A 105 605 716 HOH HOH . M 6 HOH A 106 606 720 HOH HOH . M 6 HOH A 107 607 721 HOH HOH . M 6 HOH A 108 608 723 HOH HOH . M 6 HOH A 109 609 727 HOH HOH . M 6 HOH A 110 610 728 HOH HOH . M 6 HOH A 111 611 730 HOH HOH . N 6 HOH B 1 501 507 HOH HOH . N 6 HOH B 2 502 522 HOH HOH . N 6 HOH B 3 503 528 HOH HOH . N 6 HOH B 4 504 529 HOH HOH . N 6 HOH B 5 505 530 HOH HOH . N 6 HOH B 6 506 532 HOH HOH . N 6 HOH B 7 507 534 HOH HOH . N 6 HOH B 8 508 535 HOH HOH . N 6 HOH B 9 509 536 HOH HOH . N 6 HOH B 10 510 537 HOH HOH . N 6 HOH B 11 511 538 HOH HOH . N 6 HOH B 12 512 539 HOH HOH . N 6 HOH B 13 513 540 HOH HOH . N 6 HOH B 14 514 541 HOH HOH . N 6 HOH B 15 515 542 HOH HOH . N 6 HOH B 16 516 543 HOH HOH . N 6 HOH B 17 517 544 HOH HOH . N 6 HOH B 18 518 545 HOH HOH . N 6 HOH B 19 519 547 HOH HOH . N 6 HOH B 20 520 548 HOH HOH . N 6 HOH B 21 521 549 HOH HOH . N 6 HOH B 22 522 550 HOH HOH . N 6 HOH B 23 523 551 HOH HOH . N 6 HOH B 24 524 552 HOH HOH . N 6 HOH B 25 525 554 HOH HOH . N 6 HOH B 26 526 559 HOH HOH . N 6 HOH B 27 527 560 HOH HOH . N 6 HOH B 28 528 561 HOH HOH . N 6 HOH B 29 529 562 HOH HOH . N 6 HOH B 30 530 566 HOH HOH . N 6 HOH B 31 531 567 HOH HOH . N 6 HOH B 32 532 569 HOH HOH . N 6 HOH B 33 533 572 HOH HOH . N 6 HOH B 34 534 573 HOH HOH . N 6 HOH B 35 535 582 HOH HOH . N 6 HOH B 36 536 583 HOH HOH . N 6 HOH B 37 537 584 HOH HOH . N 6 HOH B 38 538 587 HOH HOH . N 6 HOH B 39 539 588 HOH HOH . N 6 HOH B 40 540 591 HOH HOH . N 6 HOH B 41 541 594 HOH HOH . N 6 HOH B 42 542 596 HOH HOH . N 6 HOH B 43 543 597 HOH HOH . N 6 HOH B 44 544 599 HOH HOH . N 6 HOH B 45 545 601 HOH HOH . N 6 HOH B 46 546 602 HOH HOH . N 6 HOH B 47 547 609 HOH HOH . N 6 HOH B 48 548 615 HOH HOH . N 6 HOH B 49 549 616 HOH HOH . N 6 HOH B 50 550 617 HOH HOH . N 6 HOH B 51 551 619 HOH HOH . N 6 HOH B 52 552 621 HOH HOH . N 6 HOH B 53 553 622 HOH HOH . N 6 HOH B 54 554 624 HOH HOH . N 6 HOH B 55 555 625 HOH HOH . N 6 HOH B 56 556 628 HOH HOH . N 6 HOH B 57 557 629 HOH HOH . N 6 HOH B 58 558 630 HOH HOH . N 6 HOH B 59 559 632 HOH HOH . N 6 HOH B 60 560 634 HOH HOH . N 6 HOH B 61 561 636 HOH HOH . N 6 HOH B 62 562 637 HOH HOH . N 6 HOH B 63 563 639 HOH HOH . N 6 HOH B 64 564 643 HOH HOH . N 6 HOH B 65 565 644 HOH HOH . N 6 HOH B 66 566 645 HOH HOH . N 6 HOH B 67 567 646 HOH HOH . N 6 HOH B 68 568 648 HOH HOH . N 6 HOH B 69 569 652 HOH HOH . N 6 HOH B 70 570 653 HOH HOH . N 6 HOH B 71 571 657 HOH HOH . N 6 HOH B 72 572 658 HOH HOH . N 6 HOH B 73 573 659 HOH HOH . N 6 HOH B 74 574 660 HOH HOH . N 6 HOH B 75 575 661 HOH HOH . N 6 HOH B 76 576 664 HOH HOH . N 6 HOH B 77 577 665 HOH HOH . N 6 HOH B 78 578 666 HOH HOH . N 6 HOH B 79 579 668 HOH HOH . N 6 HOH B 80 580 670 HOH HOH . N 6 HOH B 81 581 671 HOH HOH . N 6 HOH B 82 582 673 HOH HOH . N 6 HOH B 83 583 675 HOH HOH . N 6 HOH B 84 584 676 HOH HOH . N 6 HOH B 85 585 681 HOH HOH . N 6 HOH B 86 586 682 HOH HOH . N 6 HOH B 87 587 688 HOH HOH . N 6 HOH B 88 588 690 HOH HOH . N 6 HOH B 89 589 693 HOH HOH . N 6 HOH B 90 590 694 HOH HOH . N 6 HOH B 91 591 695 HOH HOH . N 6 HOH B 92 592 697 HOH HOH . N 6 HOH B 93 593 698 HOH HOH . N 6 HOH B 94 594 700 HOH HOH . N 6 HOH B 95 595 702 HOH HOH . N 6 HOH B 96 596 703 HOH HOH . N 6 HOH B 97 597 704 HOH HOH . N 6 HOH B 98 598 705 HOH HOH . N 6 HOH B 99 599 706 HOH HOH . N 6 HOH B 100 600 707 HOH HOH . N 6 HOH B 101 601 710 HOH HOH . N 6 HOH B 102 602 711 HOH HOH . N 6 HOH B 103 603 713 HOH HOH . N 6 HOH B 104 604 714 HOH HOH . N 6 HOH B 105 605 717 HOH HOH . N 6 HOH B 106 606 718 HOH HOH . N 6 HOH B 107 607 724 HOH HOH . N 6 HOH B 108 608 726 HOH HOH . N 6 HOH B 109 609 729 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 5 14.917 21.619 11.105 1 47.17 ? P PO4 405 A 1 HETATM 2 O O1 PO4 . . . G 5 15.796 20.538 11.653 1 48.86 ? O1 PO4 405 A 1 HETATM 3 O O2 PO4 . . . G 5 14.265 21.054 9.829 1 45.32 ? O2 PO4 405 A 1 HETATM 4 O O3 PO4 . . . G 5 14.02 22.14 12.202 1 44.91 ? O3 PO4 405 A 1 HETATM 5 O O4 PO4 . . . G 5 15.804 22.79 10.814 1 49.1 ? O4 PO4 405 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #