data_4GYU # _model_server_result.job_id RJRfJm-eC6l3TBxHJYaMtg _model_server_result.datetime_utc '2024-11-25 21:48:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4gyu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4GYU # _exptl.entry_id 4GYU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4GYU _cell.length_a 101.473 _cell.length_b 101.473 _cell.length_c 42.679 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GYU _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 260 n n O1 H1 P6G sing 261 n n C2 C3 P6G sing 262 n n C2 H21 P6G sing 263 n n C2 H22 P6G sing 264 n n C3 O4 P6G sing 265 n n C3 H31 P6G sing 266 n n C3 H32 P6G sing 267 n n O4 C5 P6G sing 268 n n C5 C6 P6G sing 269 n n C5 H51 P6G sing 270 n n C5 H52 P6G sing 271 n n C6 O7 P6G sing 272 n n C6 H61 P6G sing 273 n n C6 H62 P6G sing 274 n n O7 C8 P6G sing 275 n n C8 C9 P6G sing 276 n n C8 H81 P6G sing 277 n n C8 H82 P6G sing 278 n n C9 O10 P6G sing 279 n n C9 H91 P6G sing 280 n n C9 H92 P6G sing 281 n n O10 C11 P6G sing 282 n n C11 C12 P6G sing 283 n n C11 H111 P6G sing 284 n n C11 H112 P6G sing 285 n n C12 O13 P6G sing 286 n n C12 H121 P6G sing 287 n n C12 H122 P6G sing 288 n n O13 C14 P6G sing 289 n n C14 C15 P6G sing 290 n n C14 H141 P6G sing 291 n n C14 H142 P6G sing 292 n n C15 O16 P6G sing 293 n n C15 H151 P6G sing 294 n n C15 H152 P6G sing 295 n n O16 C17 P6G sing 296 n n C17 C18 P6G sing 297 n n C17 H171 P6G sing 298 n n C17 H172 P6G sing 299 n n C18 O19 P6G sing 300 n n C18 H181 P6G sing 301 n n C18 H182 P6G sing 302 n n O19 H19 P6G sing 303 n n # _atom_sites.entry_id 4GYU _atom_sites.fract_transf_matrix[1][1] 0.009855 _atom_sites.fract_transf_matrix[1][2] 0.00569 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011379 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023431 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 301 281 IMD IMD . C 2 IMD A 1 302 282 IMD IMD . D 3 P6G A 1 303 283 P6G PG6 . E 4 PEG A 1 304 284 PEG PEG . F 5 GOL A 1 305 285 GOL GOL . G 5 GOL A 1 306 286 GOL GOL . H 6 HOH A 1 401 1 HOH HOH . H 6 HOH A 2 402 2 HOH HOH . H 6 HOH A 3 403 3 HOH HOH . H 6 HOH A 4 404 4 HOH HOH . H 6 HOH A 5 405 5 HOH HOH . H 6 HOH A 6 406 6 HOH HOH . H 6 HOH A 7 407 7 HOH HOH . H 6 HOH A 8 408 8 HOH HOH . H 6 HOH A 9 409 9 HOH HOH . H 6 HOH A 10 410 10 HOH HOH . H 6 HOH A 11 411 11 HOH HOH . H 6 HOH A 12 412 12 HOH HOH . H 6 HOH A 13 413 13 HOH HOH . H 6 HOH A 14 414 14 HOH HOH . H 6 HOH A 15 415 15 HOH HOH . H 6 HOH A 16 416 16 HOH HOH . H 6 HOH A 17 417 17 HOH HOH . H 6 HOH A 18 418 18 HOH HOH . H 6 HOH A 19 419 19 HOH HOH . H 6 HOH A 20 420 20 HOH HOH . H 6 HOH A 21 421 21 HOH HOH . H 6 HOH A 22 422 22 HOH HOH . H 6 HOH A 23 423 23 HOH HOH . H 6 HOH A 24 424 24 HOH HOH . H 6 HOH A 25 425 25 HOH HOH . H 6 HOH A 26 426 26 HOH HOH . H 6 HOH A 27 427 27 HOH HOH . H 6 HOH A 28 428 28 HOH HOH . H 6 HOH A 29 429 29 HOH HOH . H 6 HOH A 30 430 30 HOH HOH . H 6 HOH A 31 431 31 HOH HOH . H 6 HOH A 32 432 32 HOH HOH . H 6 HOH A 33 433 33 HOH HOH . H 6 HOH A 34 434 34 HOH HOH . H 6 HOH A 35 435 35 HOH HOH . H 6 HOH A 36 436 36 HOH HOH . H 6 HOH A 37 437 37 HOH HOH . H 6 HOH A 38 438 38 HOH HOH . H 6 HOH A 39 439 39 HOH HOH . H 6 HOH A 40 440 40 HOH HOH . H 6 HOH A 41 441 41 HOH HOH . H 6 HOH A 42 442 42 HOH HOH . H 6 HOH A 43 443 43 HOH HOH . H 6 HOH A 44 444 44 HOH HOH . H 6 HOH A 45 445 45 HOH HOH . H 6 HOH A 46 446 46 HOH HOH . H 6 HOH A 47 447 47 HOH HOH . H 6 HOH A 48 448 48 HOH HOH . H 6 HOH A 49 449 49 HOH HOH . H 6 HOH A 50 450 50 HOH HOH . H 6 HOH A 51 451 51 HOH HOH . H 6 HOH A 52 452 52 HOH HOH . H 6 HOH A 53 453 53 HOH HOH . H 6 HOH A 54 454 54 HOH HOH . H 6 HOH A 55 455 55 HOH HOH . H 6 HOH A 56 456 56 HOH HOH . H 6 HOH A 57 457 57 HOH HOH . H 6 HOH A 58 458 58 HOH HOH . H 6 HOH A 59 459 59 HOH HOH . H 6 HOH A 60 460 60 HOH HOH . H 6 HOH A 61 461 61 HOH HOH . H 6 HOH A 62 462 62 HOH HOH . H 6 HOH A 63 463 63 HOH HOH . H 6 HOH A 64 464 64 HOH HOH . H 6 HOH A 65 465 65 HOH HOH . H 6 HOH A 66 466 66 HOH HOH . H 6 HOH A 67 467 67 HOH HOH . H 6 HOH A 68 468 68 HOH HOH . H 6 HOH A 69 469 69 HOH HOH . H 6 HOH A 70 470 70 HOH HOH . H 6 HOH A 71 471 71 HOH HOH . H 6 HOH A 72 472 72 HOH HOH . H 6 HOH A 73 473 73 HOH HOH . H 6 HOH A 74 474 74 HOH HOH . H 6 HOH A 75 475 75 HOH HOH . H 6 HOH A 76 476 76 HOH HOH . H 6 HOH A 77 477 77 HOH HOH . H 6 HOH A 78 478 78 HOH HOH . H 6 HOH A 79 479 79 HOH HOH . H 6 HOH A 80 480 80 HOH HOH . H 6 HOH A 81 481 81 HOH HOH . H 6 HOH A 82 482 82 HOH HOH . H 6 HOH A 83 483 83 HOH HOH . H 6 HOH A 84 484 84 HOH HOH . H 6 HOH A 85 485 85 HOH HOH . H 6 HOH A 86 486 86 HOH HOH . H 6 HOH A 87 487 87 HOH HOH . H 6 HOH A 88 488 88 HOH HOH . H 6 HOH A 89 489 89 HOH HOH . H 6 HOH A 90 490 90 HOH HOH . H 6 HOH A 91 491 91 HOH HOH . H 6 HOH A 92 492 92 HOH HOH . H 6 HOH A 93 493 93 HOH HOH . H 6 HOH A 94 494 94 HOH HOH . H 6 HOH A 95 495 95 HOH HOH . H 6 HOH A 96 496 96 HOH HOH . H 6 HOH A 97 497 97 HOH HOH . H 6 HOH A 98 498 98 HOH HOH . H 6 HOH A 99 499 99 HOH HOH . H 6 HOH A 100 500 100 HOH HOH . H 6 HOH A 101 501 101 HOH HOH . H 6 HOH A 102 502 102 HOH HOH . H 6 HOH A 103 503 103 HOH HOH . H 6 HOH A 104 504 104 HOH HOH . H 6 HOH A 105 505 105 HOH HOH . H 6 HOH A 106 506 106 HOH HOH . H 6 HOH A 107 507 107 HOH HOH . H 6 HOH A 108 508 108 HOH HOH . H 6 HOH A 109 509 109 HOH HOH . H 6 HOH A 110 510 110 HOH HOH . H 6 HOH A 111 511 111 HOH HOH . H 6 HOH A 112 512 112 HOH HOH . H 6 HOH A 113 513 113 HOH HOH . H 6 HOH A 114 514 114 HOH HOH . H 6 HOH A 115 515 115 HOH HOH . H 6 HOH A 116 516 116 HOH HOH . H 6 HOH A 117 517 117 HOH HOH . H 6 HOH A 118 518 118 HOH HOH . H 6 HOH A 119 519 119 HOH HOH . H 6 HOH A 120 520 120 HOH HOH . H 6 HOH A 121 521 121 HOH HOH . H 6 HOH A 122 522 122 HOH HOH . H 6 HOH A 123 523 123 HOH HOH . H 6 HOH A 124 524 124 HOH HOH . H 6 HOH A 125 525 125 HOH HOH . H 6 HOH A 126 526 126 HOH HOH . H 6 HOH A 127 527 127 HOH HOH . H 6 HOH A 128 528 128 HOH HOH . H 6 HOH A 129 529 129 HOH HOH . H 6 HOH A 130 530 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . D 3 18.682 -45.055 17.247 1 36.19 ? O1 P6G 303 A 1 HETATM 2 C C2 P6G . . . D 3 18.235 -45.761 16.149 1 33.63 ? C2 P6G 303 A 1 HETATM 3 C C3 P6G . . . D 3 19.273 -46.327 15.26 1 38.37 ? C3 P6G 303 A 1 HETATM 4 O O4 P6G . . . D 3 19.306 -45.869 13.966 1 31.38 ? O4 P6G 303 A 1 HETATM 5 C C5 P6G . . . D 3 19.019 -46.714 12.916 1 29.76 ? C5 P6G 303 A 1 HETATM 6 C C6 P6G . . . D 3 20.045 -46.787 11.836 1 24.08 ? C6 P6G 303 A 1 HETATM 7 O O7 P6G . . . D 3 20.69 -45.594 11.607 1 21.01 ? O7 P6G 303 A 1 HETATM 8 C C8 P6G . . . D 3 21.954 -45.598 11.077 1 25.17 ? C8 P6G 303 A 1 HETATM 9 C C9 P6G . . . D 3 22.082 -46.152 9.713 1 21.07 ? C9 P6G 303 A 1 HETATM 10 O O10 P6G . . . D 3 21.428 -45.457 8.713 1 23.44 ? O10 P6G 303 A 1 HETATM 11 C C11 P6G . . . D 3 21.525 -45.941 7.422 1 16.51 ? C11 P6G 303 A 1 HETATM 12 C C12 P6G . . . D 3 22.857 -45.694 6.809 1 16.44 ? C12 P6G 303 A 1 HETATM 13 O O13 P6G . . . D 3 23.364 -44.445 7.08 1 17.91 ? O13 P6G 303 A 1 HETATM 14 C C14 P6G . . . D 3 24.372 -43.869 6.345 1 27.58 ? C14 P6G 303 A 1 HETATM 15 C C15 P6G . . . D 3 24.547 -42.407 6.583 1 25.69 ? C15 P6G 303 A 1 HETATM 16 O O16 P6G . . . D 3 25.551 -41.734 5.932 1 37.13 ? O16 P6G 303 A 1 HETATM 17 C C17 P6G . . . D 3 26.159 -40.695 6.601 1 42.57 ? C17 P6G 303 A 1 HETATM 18 C C18 P6G . . . D 3 26.828 -39.637 5.794 1 46.88 ? C18 P6G 303 A 1 HETATM 19 O O19 P6G . . . D 3 26.934 -39.843 4.439 1 48.15 ? O19 P6G 303 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #