data_4H07 # _model_server_result.job_id JnLs-ryHhslBW2YP92wpmw _model_server_result.datetime_utc '2024-11-08 09:13:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4h07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 4H07 # _exptl.entry_id 4H07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4H07 _cell.length_a 90.531 _cell.length_b 90.531 _cell.length_c 45.158 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4H07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 J O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 4H07 _atom_sites.fract_transf_matrix[1][1] 0.011046 _atom_sites.fract_transf_matrix[1][2] 0.006377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012755 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 154 HEM HEM . C 3 IPH A 1 202 155 IPH IPH . D 4 SO4 A 1 203 156 SO4 SO4 . E 4 SO4 A 1 204 158 SO4 SO4 . F 4 SO4 A 1 205 159 SO4 SO4 . G 4 SO4 A 1 206 160 SO4 SO4 . H 5 EDO A 1 207 161 EDO EDO . I 5 EDO A 1 208 162 EDO EDO . J 6 HOH A 1 301 1 HOH HOH . J 6 HOH A 2 302 2 HOH HOH . J 6 HOH A 3 303 3 HOH HOH . J 6 HOH A 4 304 5 HOH HOH . J 6 HOH A 5 305 6 HOH HOH . J 6 HOH A 6 306 7 HOH HOH . J 6 HOH A 7 307 8 HOH HOH . J 6 HOH A 8 308 9 HOH HOH . J 6 HOH A 9 309 10 HOH HOH . J 6 HOH A 10 310 11 HOH HOH . J 6 HOH A 11 311 12 HOH HOH . J 6 HOH A 12 312 13 HOH HOH . J 6 HOH A 13 313 14 HOH HOH . J 6 HOH A 14 314 15 HOH HOH . J 6 HOH A 15 315 16 HOH HOH . J 6 HOH A 16 316 17 HOH HOH . J 6 HOH A 17 317 18 HOH HOH . J 6 HOH A 18 318 19 HOH HOH . J 6 HOH A 19 319 20 HOH HOH . J 6 HOH A 20 320 21 HOH HOH . J 6 HOH A 21 321 22 HOH HOH . J 6 HOH A 22 322 23 HOH HOH . J 6 HOH A 23 323 26 HOH HOH . J 6 HOH A 24 324 27 HOH HOH . J 6 HOH A 25 325 28 HOH HOH . J 6 HOH A 26 326 29 HOH HOH . J 6 HOH A 27 327 30 HOH HOH . J 6 HOH A 28 328 31 HOH HOH . J 6 HOH A 29 329 32 HOH HOH . J 6 HOH A 30 330 33 HOH HOH . J 6 HOH A 31 331 34 HOH HOH . J 6 HOH A 32 332 35 HOH HOH . J 6 HOH A 33 333 36 HOH HOH . J 6 HOH A 34 334 38 HOH HOH . J 6 HOH A 35 335 39 HOH HOH . J 6 HOH A 36 336 40 HOH HOH . J 6 HOH A 37 337 41 HOH HOH . J 6 HOH A 38 338 42 HOH HOH . J 6 HOH A 39 339 43 HOH HOH . J 6 HOH A 40 340 44 HOH HOH . J 6 HOH A 41 341 45 HOH HOH . J 6 HOH A 42 342 46 HOH HOH . J 6 HOH A 43 343 47 HOH HOH . J 6 HOH A 44 344 48 HOH HOH . J 6 HOH A 45 345 49 HOH HOH . J 6 HOH A 46 346 50 HOH HOH . J 6 HOH A 47 347 51 HOH HOH . J 6 HOH A 48 348 52 HOH HOH . J 6 HOH A 49 349 53 HOH HOH . J 6 HOH A 50 350 54 HOH HOH . J 6 HOH A 51 351 55 HOH HOH . J 6 HOH A 52 352 56 HOH HOH . J 6 HOH A 53 353 57 HOH HOH . J 6 HOH A 54 354 58 HOH HOH . J 6 HOH A 55 355 60 HOH HOH . J 6 HOH A 56 356 61 HOH HOH . J 6 HOH A 57 357 62 HOH HOH . J 6 HOH A 58 358 64 HOH HOH . J 6 HOH A 59 359 66 HOH HOH . J 6 HOH A 60 360 67 HOH HOH . J 6 HOH A 61 361 68 HOH HOH . J 6 HOH A 62 362 69 HOH HOH . J 6 HOH A 63 363 70 HOH HOH . J 6 HOH A 64 364 71 HOH HOH . J 6 HOH A 65 365 72 HOH HOH . J 6 HOH A 66 366 74 HOH HOH . J 6 HOH A 67 367 75 HOH HOH . J 6 HOH A 68 368 77 HOH HOH . J 6 HOH A 69 369 78 HOH HOH . J 6 HOH A 70 370 79 HOH HOH . J 6 HOH A 71 371 80 HOH HOH . J 6 HOH A 72 372 82 HOH HOH . J 6 HOH A 73 373 83 HOH HOH . J 6 HOH A 74 374 84 HOH HOH . J 6 HOH A 75 375 85 HOH HOH . J 6 HOH A 76 376 86 HOH HOH . J 6 HOH A 77 377 87 HOH HOH . J 6 HOH A 78 378 89 HOH HOH . J 6 HOH A 79 379 90 HOH HOH . J 6 HOH A 80 380 91 HOH HOH . J 6 HOH A 81 381 92 HOH HOH . J 6 HOH A 82 382 94 HOH HOH . J 6 HOH A 83 383 95 HOH HOH . J 6 HOH A 84 384 96 HOH HOH . J 6 HOH A 85 385 97 HOH HOH . J 6 HOH A 86 386 98 HOH HOH . J 6 HOH A 87 387 99 HOH HOH . J 6 HOH A 88 388 102 HOH HOH . J 6 HOH A 89 389 104 HOH HOH . J 6 HOH A 90 390 105 HOH HOH . J 6 HOH A 91 391 107 HOH HOH . J 6 HOH A 92 392 108 HOH HOH . J 6 HOH A 93 393 109 HOH HOH . J 6 HOH A 94 394 110 HOH HOH . J 6 HOH A 95 395 111 HOH HOH . J 6 HOH A 96 396 112 HOH HOH . J 6 HOH A 97 397 113 HOH HOH . J 6 HOH A 98 398 114 HOH HOH . J 6 HOH A 99 399 116 HOH HOH . J 6 HOH A 100 400 117 HOH HOH . J 6 HOH A 101 401 118 HOH HOH . J 6 HOH A 102 402 119 HOH HOH . J 6 HOH A 103 403 121 HOH HOH . J 6 HOH A 104 404 123 HOH HOH . J 6 HOH A 105 405 124 HOH HOH . J 6 HOH A 106 406 125 HOH HOH . J 6 HOH A 107 407 126 HOH HOH . J 6 HOH A 108 408 127 HOH HOH . J 6 HOH A 109 409 128 HOH HOH . J 6 HOH A 110 410 129 HOH HOH . J 6 HOH A 111 411 132 HOH HOH . J 6 HOH A 112 412 133 HOH HOH . J 6 HOH A 113 413 134 HOH HOH . J 6 HOH A 114 414 136 HOH HOH . J 6 HOH A 115 415 137 HOH HOH . J 6 HOH A 116 416 138 HOH HOH . J 6 HOH A 117 417 139 HOH HOH . J 6 HOH A 118 418 140 HOH HOH . J 6 HOH A 119 419 142 HOH HOH . J 6 HOH A 120 420 143 HOH HOH . J 6 HOH A 121 421 144 HOH HOH . J 6 HOH A 122 422 145 HOH HOH . J 6 HOH A 123 423 146 HOH HOH . J 6 HOH A 124 424 147 HOH HOH . J 6 HOH A 125 425 148 HOH HOH . J 6 HOH A 126 426 149 HOH HOH . J 6 HOH A 127 427 150 HOH HOH . J 6 HOH A 128 428 151 HOH HOH . J 6 HOH A 129 429 153 HOH HOH . J 6 HOH A 130 430 154 HOH HOH . J 6 HOH A 131 431 155 HOH HOH . J 6 HOH A 132 432 163 HOH HOH . J 6 HOH A 133 433 164 HOH HOH . J 6 HOH A 134 434 165 HOH HOH . J 6 HOH A 135 435 166 HOH HOH . J 6 HOH A 136 436 167 HOH HOH . J 6 HOH A 137 437 168 HOH HOH . J 6 HOH A 138 438 169 HOH HOH . J 6 HOH A 139 439 170 HOH HOH . J 6 HOH A 140 440 171 HOH HOH . J 6 HOH A 141 441 172 HOH HOH . J 6 HOH A 142 442 173 HOH HOH . J 6 HOH A 143 443 174 HOH HOH . J 6 HOH A 144 444 175 HOH HOH . J 6 HOH A 145 445 176 HOH HOH . J 6 HOH A 146 446 177 HOH HOH . J 6 HOH A 147 447 178 HOH HOH . J 6 HOH A 148 448 179 HOH HOH . J 6 HOH A 149 449 180 HOH HOH . J 6 HOH A 150 450 181 HOH HOH . J 6 HOH A 151 451 182 HOH HOH . J 6 HOH A 152 452 183 HOH HOH . J 6 HOH A 153 453 184 HOH HOH . J 6 HOH A 154 454 185 HOH HOH . J 6 HOH A 155 455 186 HOH HOH . J 6 HOH A 156 456 187 HOH HOH . J 6 HOH A 157 457 188 HOH HOH . J 6 HOH A 158 458 189 HOH HOH . J 6 HOH A 159 459 190 HOH HOH . J 6 HOH A 160 460 191 HOH HOH . J 6 HOH A 161 461 192 HOH HOH . J 6 HOH A 162 462 193 HOH HOH . J 6 HOH A 163 463 194 HOH HOH . J 6 HOH A 164 464 196 HOH HOH . J 6 HOH A 165 465 197 HOH HOH . J 6 HOH A 166 466 198 HOH HOH . J 6 HOH A 167 467 199 HOH HOH . J 6 HOH A 168 468 200 HOH HOH . J 6 HOH A 169 469 201 HOH HOH . J 6 HOH A 170 470 202 HOH HOH . J 6 HOH A 171 471 203 HOH HOH . J 6 HOH A 172 472 204 HOH HOH . J 6 HOH A 173 473 205 HOH HOH . J 6 HOH A 174 474 208 HOH HOH . J 6 HOH A 175 475 209 HOH HOH . J 6 HOH A 176 476 210 HOH HOH . J 6 HOH A 177 477 211 HOH HOH . J 6 HOH A 178 478 212 HOH HOH . J 6 HOH A 179 479 213 HOH HOH . J 6 HOH A 180 480 214 HOH HOH . J 6 HOH A 181 481 215 HOH HOH . J 6 HOH A 182 482 216 HOH HOH . J 6 HOH A 183 483 217 HOH HOH . J 6 HOH A 184 484 218 HOH HOH . J 6 HOH A 185 485 219 HOH HOH . J 6 HOH A 186 486 220 HOH HOH . J 6 HOH A 187 487 221 HOH HOH . J 6 HOH A 188 488 222 HOH HOH . J 6 HOH A 189 489 223 HOH HOH . J 6 HOH A 190 490 225 HOH HOH . J 6 HOH A 191 491 226 HOH HOH . J 6 HOH A 192 492 228 HOH HOH . J 6 HOH A 193 493 230 HOH HOH . J 6 HOH A 194 494 231 HOH HOH . J 6 HOH A 195 495 233 HOH HOH . J 6 HOH A 196 496 234 HOH HOH . J 6 HOH A 197 497 235 HOH HOH . J 6 HOH A 198 498 236 HOH HOH . J 6 HOH A 199 499 237 HOH HOH . J 6 HOH A 200 500 238 HOH HOH . J 6 HOH A 201 501 239 HOH HOH . J 6 HOH A 202 502 240 HOH HOH . J 6 HOH A 203 503 243 HOH HOH . J 6 HOH A 204 504 245 HOH HOH . J 6 HOH A 205 505 247 HOH HOH . J 6 HOH A 206 506 248 HOH HOH . J 6 HOH A 207 507 249 HOH HOH . J 6 HOH A 208 508 250 HOH HOH . J 6 HOH A 209 509 253 HOH HOH . J 6 HOH A 210 510 254 HOH HOH . J 6 HOH A 211 511 255 HOH HOH . J 6 HOH A 212 512 256 HOH HOH . J 6 HOH A 213 513 259 HOH HOH . J 6 HOH A 214 514 260 HOH HOH . J 6 HOH A 215 515 261 HOH HOH . J 6 HOH A 216 516 264 HOH HOH . J 6 HOH A 217 517 265 HOH HOH . J 6 HOH A 218 518 267 HOH HOH . J 6 HOH A 219 519 272 HOH HOH . J 6 HOH A 220 520 279 HOH HOH . J 6 HOH A 221 521 280 HOH HOH . J 6 HOH A 222 522 281 HOH HOH . J 6 HOH A 223 523 282 HOH HOH . J 6 HOH A 224 524 283 HOH HOH . J 6 HOH A 225 525 284 HOH HOH . J 6 HOH A 226 526 285 HOH HOH . J 6 HOH A 227 527 286 HOH HOH . J 6 HOH A 228 528 287 HOH HOH . J 6 HOH A 229 529 288 HOH HOH . J 6 HOH A 230 530 289 HOH HOH . J 6 HOH A 231 531 290 HOH HOH . J 6 HOH A 232 532 291 HOH HOH . J 6 HOH A 233 533 292 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 5 23.129 -17.996 -0.537 1 30.98 ? C1 EDO 207 A 1 HETATM 2 O O1 EDO . . . H 5 22.796 -17.755 -1.936 1 31.23 ? O1 EDO 207 A 1 HETATM 3 C C2 EDO . . . H 5 22.179 -19.16 -0.254 1 20.42 ? C2 EDO 207 A 1 HETATM 4 O O2 EDO . . . H 5 22.229 -20.106 -1.304 1 23.07 ? O2 EDO 207 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #